RNA–Protein interactions for RNA: ENST00000354504.7

VPS54-202, Transcript of VPS54, GARP complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS54, Length 3,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS54-202ENST00000354504 KLK4Q9Y5K2 254 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 SLCO1B1Q9Y6L6 691 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 DSPPQ9NZW4 1301 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 GRXCR1A8MXD5 290 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 E9PBE3 544 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 C1QTNF3-AMACRE9PGA6 284 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 M0QZ92 97 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 AP3B1O00203 1094 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 KLHL41O60662 606 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 TBL1XO60907 577 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 MOCS2O96007 188 aaPredicted RBP2.23□□□□□ -2.05
VPS54-202ENST00000354504 GNAO1P09471 354 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 STMN1P16949 149 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 VCLP18206 1134 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 TSPAN8P19075 237 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 CD72P21854 359 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 IL12RB1P42701 662 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 HTR3AP46098 478 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 CTSCP53634 463 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 MLLT10P55197 1068 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 UFM1P61960 85 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 ROM1Q03395 351 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 ELAVL2Q12926 359 aaKnown RBP2.23□□□□□ -2.05
VPS54-202ENST00000354504 FHL1Q13642 323 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 SPIDRQ14159 915 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 TEAD2Q15562 447 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 SNCBQ16143 134 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 MYLK3Q32MK0 819 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 SLC36A3Q495N2 470 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 CYBRD1Q53TN4 286 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 ZNF385BQ569K4 471 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 C19orf54Q5BKX5 351 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 CDKL4Q5MAI5 379 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 LRRC66Q68CR7 880 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 VASNQ6EMK4 673 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 ZNF770Q6IQ21 691 aaPredicted RBP2.23□□□□□ -2.05
VPS54-202ENST00000354504 CCDC121Q6ZUS5 278 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 NEK10Q6ZWH5 1172 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 ERN2Q76MJ5 926 aaKnown RBP2.23□□□□□ -2.05
VPS54-202ENST00000354504 PARS2Q7L3T8 475 aaKnown RBP2.23□□□□□ -2.05
VPS54-202ENST00000354504 OTOP2Q7RTS6 562 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 DEFB128Q7Z7B8 93 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 METTL23Q86XA0 190 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 LAS2Q8IYD9 372 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 SLC22A15Q8IZD6 547 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 CARNMT1Q8N4J0 409 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 TMEM199Q8N511 208 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP2.23□□□□□ -2.05
VPS54-202ENST00000354504 SLC25A41Q8N5S1 370 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 CDYL2Q8N8U2 506 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 PLA2G15Q8NCC3 412 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 OR56A3Q8NH54 315 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 PSMA8Q8TAA3 256 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 TWIST2Q8WVJ9 160 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 APH1BQ8WW43 257 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 SORCS1Q8WY21 1168 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 TFAP2CQ92754 450 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 UCN3Q969E3 161 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 ZUFSPQ96AP4 578 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 C7orf34Q96L11 122 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 ANKRD27Q96NW4 1050 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 PPP1R2P1Q96PQ5 205 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 CDK5RAP1Q96SZ6 601 aaKnown RBP2.23□□□□□ -2.05
VPS54-202ENST00000354504 RUFY1Q96T51 708 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 GPHA2Q96T91 129 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 CSF3RQ99062 836 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 ACOX2Q99424 681 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 NEU1Q99519 415 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 SEPT5Q99719 369 aaPredicted RBP2.23□□□□□ -2.05
VPS54-202ENST00000354504 PSD2Q9BQI7 771 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 FERMT1Q9BQL6 677 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 CPPED1Q9BRF8 314 aaPredicted RBP2.23□□□□□ -2.05
VPS54-202ENST00000354504 ZNF649Q9BS31 505 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 RPP25Q9BUL9 199 aaKnown RBP2.23□□□□□ -2.05
VPS54-202ENST00000354504 SLAMF7Q9NQ25 335 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 TCF7L2Q9NQB0 619 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 TXLNGQ9NUQ3 528 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 NCKIPSDQ9NZQ3 722 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 LUZP4Q9P127 313 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 PACSIN3Q9UKS6 424 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 SSX2IPQ9Y2D8 614 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 ACOT9Q9Y305 439 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 INSL6Q9Y581 213 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 MAD1L1Q9Y6D9 718 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 HRNRQ86YZ3 2850 aaPredicted RBP2.22□□□□□ -2.05
VPS54-202ENST00000354504 RALGAPA1Q6GYQ0 2036 aa2.22□□□□□ -2.05
VPS54-202ENST00000354504 GOLGA8QA0A0J9YX86 632 aa2.22□□□□□ -2.05
VPS54-202ENST00000354504 GOLGA8OA6NCC3 632 aa2.22□□□□□ -2.05
VPS54-202ENST00000354504 B4DXG7 233 aa2.22□□□□□ -2.05
VPS54-202ENST00000354504 FAM227AF5H4B4 570 aa2.22□□□□□ -2.05
VPS54-202ENST00000354504 GOLGA8NF8WBI6 632 aa2.22□□□□□ -2.05
VPS54-202ENST00000354504 TSPAN3O60637 253 aa2.22□□□□□ -2.05
VPS54-202ENST00000354504 DPM1O60762 260 aa2.22□□□□□ -2.05
VPS54-202ENST00000354504 PDE5AO76074 875 aa2.22□□□□□ -2.05
VPS54-202ENST00000354504 TOX4O94842 621 aa2.22□□□□□ -2.05
VPS54-202ENST00000354504 APOA4P06727 396 aa2.22□□□□□ -2.05
VPS54-202ENST00000354504 RHOP08100 348 aa2.22□□□□□ -2.05
VPS54-202ENST00000354504 ABCB1P08183 1280 aaPredicted RBP2.22□□□□□ -2.05
VPS54-202ENST00000354504 HMBSP08397 361 aa2.22□□□□□ -2.05
VPS54-202ENST00000354504 LAG3P18627 525 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms