RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 SCAIQ8N9R8 606 aa23.62■■□□□ 1.37
CPNE1-202ENST00000352393 SPPL2AQ8TCT8 520 aa23.62■■□□□ 1.37
CPNE1-202ENST00000352393 COQ8BQ96D53 544 aa23.62■■□□□ 1.37
CPNE1-202ENST00000352393 PRDM8Q9NQV8 689 aa23.62■■□□□ 1.37
CPNE1-202ENST00000352393 RAD18Q9NS91 495 aa23.62■■□□□ 1.37
CPNE1-202ENST00000352393 MAPRE3Q9UPY8 281 aa23.62■■□□□ 1.37
CPNE1-202ENST00000352393 PLXNA2O75051 1894 aa23.62■■□□□ 1.37
CPNE1-202ENST00000352393 BNIP3LO60238 219 aa23.61■■□□□ 1.37
CPNE1-202ENST00000352393 RPLP0P05388 317 aaKnown RBP23.61■■□□□ 1.37
CPNE1-202ENST00000352393 ANXA4P09525 319 aaPredicted RBP23.61■■□□□ 1.37
CPNE1-202ENST00000352393 HNF4AP41235 474 aa23.61■■□□□ 1.37
CPNE1-202ENST00000352393 MVDP53602 400 aa23.61■■□□□ 1.37
CPNE1-202ENST00000352393 LIMK1P53667 647 aa23.61■■□□□ 1.37
CPNE1-202ENST00000352393 BCL2A1Q16548 175 aa23.61■■□□□ 1.37
CPNE1-202ENST00000352393 LRRC73Q5JTD7 316 aa23.61■■□□□ 1.37
CPNE1-202ENST00000352393 STEAP3Q658P3 488 aa23.61■■□□□ 1.37
CPNE1-202ENST00000352393 ADNP2Q6IQ32 1131 aa23.61■■□□□ 1.37
CPNE1-202ENST00000352393 VPS37AQ8NEZ2 397 aa23.61■■□□□ 1.37
CPNE1-202ENST00000352393 ZNF675Q8TD23 568 aa23.61■■□□□ 1.37
CPNE1-202ENST00000352393 CLP1Q92989 425 aaKnown RBP23.61■■□□□ 1.37
CPNE1-202ENST00000352393 LMLNQ96KR4 655 aa23.61■■□□□ 1.37
CPNE1-202ENST00000352393 AMBNQ9NP70 447 aa23.61■■□□□ 1.37
CPNE1-202ENST00000352393 RLIMQ9NVW2 624 aa23.61■■□□□ 1.37
CPNE1-202ENST00000352393 ZNF226Q9NYT6 803 aa23.61■■□□□ 1.37
CPNE1-202ENST00000352393 POFUT2Q9Y2G5 429 aa23.61■■□□□ 1.37
CPNE1-202ENST00000352393 PCDHGA3Q9Y5H0 932 aa23.61■■□□□ 1.37
CPNE1-202ENST00000352393 DENND4CQ5VZ89 1909 aa23.61■■□□□ 1.37
CPNE1-202ENST00000352393 TBX1O43435 398 aa23.6■■□□□ 1.37
CPNE1-202ENST00000352393 ADORA3P0DMS8 318 aa23.6■■□□□ 1.37
CPNE1-202ENST00000352393 FBXO43Q4G163 708 aa23.6■■□□□ 1.37
CPNE1-202ENST00000352393 TMEM53Q6P2H8 277 aa23.6■■□□□ 1.37
CPNE1-202ENST00000352393 KLHDC8AQ8IYD2 350 aa23.6■■□□□ 1.37
CPNE1-202ENST00000352393 AMER2Q8N7J2 671 aa23.6■■□□□ 1.37
CPNE1-202ENST00000352393 KBTBD8Q8NFY9 601 aa23.6■■□□□ 1.37
CPNE1-202ENST00000352393 CDADC1Q9BWV3 514 aa23.6■■□□□ 1.37
CPNE1-202ENST00000352393 CPEB1Q9BZB8 566 aaKnown RBP23.6■■□□□ 1.37
CPNE1-202ENST00000352393 C6orf62Q9GZU0 229 aaPredicted RBP23.6■■□□□ 1.37
CPNE1-202ENST00000352393 ZDHHC6Q9H6R6 413 aa23.6■■□□□ 1.37
CPNE1-202ENST00000352393 ZNF282Q9UDV7 671 aaPredicted RBP23.6■■□□□ 1.37
CPNE1-202ENST00000352393 HS3ST2Q9Y278 367 aa23.6■■□□□ 1.37
CPNE1-202ENST00000352393 SH3BP1Q9Y3L3 701 aa23.6■■□□□ 1.37
CPNE1-202ENST00000352393 INSL5Q9Y5Q6 135 aa23.6■■□□□ 1.37
CPNE1-202ENST00000352393 SLCO2B1O94956 709 aa23.6■■□□□ 1.37
CPNE1-202ENST00000352393 SOD2P04179 222 aa23.6■■□□□ 1.37
CPNE1-202ENST00000352393 DBTP11182 482 aaKnown RBP23.6■■□□□ 1.37
CPNE1-202ENST00000352393 HLA-EP13747 358 aa23.6■■□□□ 1.37
CPNE1-202ENST00000352393 ANXA8P13928 327 aa23.6■■□□□ 1.37
CPNE1-202ENST00000352393 PTX3P26022 381 aaPredicted RBP23.6■■□□□ 1.37
CPNE1-202ENST00000352393 EPHB3P54753 998 aa23.6■■□□□ 1.37
CPNE1-202ENST00000352393 PCDH1Q08174 1060 aa23.6■■□□□ 1.37
CPNE1-202ENST00000352393 HTR3DQ70Z44 454 aa23.6■■□□□ 1.37
CPNE1-202ENST00000352393 TXNDC15Q96J42 360 aa23.6■■□□□ 1.37
CPNE1-202ENST00000352393 COL21A1Q96P44 957 aa23.6■■□□□ 1.37
CPNE1-202ENST00000352393 OR4K3Q96R72 315 aa23.6■■□□□ 1.37
CPNE1-202ENST00000352393 SGK2Q9HBY8 427 aa23.6■■□□□ 1.37
CPNE1-202ENST00000352393 GPR83Q9NYM4 423 aa23.6■■□□□ 1.37
CPNE1-202ENST00000352393 CXorf51AA0A1B0GTR3 108 aa23.59■■□□□ 1.37
CPNE1-202ENST00000352393 PSIP1O75475 530 aaKnown RBP23.59■■□□□ 1.37
CPNE1-202ENST00000352393 OPN1SWP03999 348 aa23.59■■□□□ 1.37
CPNE1-202ENST00000352393 TNFRSF1BP20333 461 aa23.59■■□□□ 1.37
CPNE1-202ENST00000352393 NUDT6P53370 316 aa23.59■■□□□ 1.37
CPNE1-202ENST00000352393 TPTEP56180 551 aa23.59■■□□□ 1.37
CPNE1-202ENST00000352393 IRF3Q14653 427 aa23.59■■□□□ 1.37
CPNE1-202ENST00000352393 TPRG1LQ5T0D9 272 aa23.59■■□□□ 1.37
CPNE1-202ENST00000352393 PNCKQ6P2M8 343 aa23.59■■□□□ 1.37
CPNE1-202ENST00000352393 OR4A15Q8NGL6 344 aa23.59■■□□□ 1.37
CPNE1-202ENST00000352393 CHTF18Q8WVB6 975 aa23.59■■□□□ 1.37
CPNE1-202ENST00000352393 ASZ1Q8WWH4 475 aa23.59■■□□□ 1.37
CPNE1-202ENST00000352393 HTRA1Q92743 480 aa23.59■■□□□ 1.37
CPNE1-202ENST00000352393 GPATCH2Q9NW75 528 aa23.59■■□□□ 1.37
CPNE1-202ENST00000352393 CFAP97Q9P2B7 532 aa23.59■■□□□ 1.37
CPNE1-202ENST00000352393 STOX2Q9P2F5 926 aaPredicted RBP23.59■■□□□ 1.37
CPNE1-202ENST00000352393 RNASET2O00584 256 aaKnown RBP23.59■■□□□ 1.37
CPNE1-202ENST00000352393 AOC2O75106 756 aa23.59■■□□□ 1.37
CPNE1-202ENST00000352393 PABPC1P11940 636 aaKnown RBP23.59■■□□□ 1.37
CPNE1-202ENST00000352393 PRKCDQ05655 676 aa23.59■■□□□ 1.37
CPNE1-202ENST00000352393 IFI44LQ53G44 452 aa23.59■■□□□ 1.37
CPNE1-202ENST00000352393 AGTRAPQ6RW13 159 aa23.59■■□□□ 1.37
CPNE1-202ENST00000352393 LGI4Q8N135 537 aa23.59■■□□□ 1.37
CPNE1-202ENST00000352393 DENND6BQ8NEG7 585 aa23.59■■□□□ 1.37
CPNE1-202ENST00000352393 EFHD2Q96C19 240 aaPredicted RBP23.59■■□□□ 1.37
CPNE1-202ENST00000352393 RAPGEFL1Q9UHV5 662 aa23.59■■□□□ 1.37
CPNE1-202ENST00000352393 EXO1Q9UQ84 846 aaKnown RBP23.59■■□□□ 1.37
CPNE1-202ENST00000352393 TNFRSF21O75509 655 aa23.58■■□□□ 1.37
CPNE1-202ENST00000352393 PTHP01270 115 aa23.58■■□□□ 1.37
CPNE1-202ENST00000352393 STSP08842 583 aa23.58■■□□□ 1.37
CPNE1-202ENST00000352393 TIA1P31483 386 aaKnown RBP eCLIP23.58■■□□□ 1.373e-7■■■■■ 41.5
CPNE1-202ENST00000352393 IDH2P48735 452 aaKnown RBP23.58■■□□□ 1.37
CPNE1-202ENST00000352393 SPIBQ01892 262 aa23.58■■□□□ 1.37
CPNE1-202ENST00000352393 KCNJ8Q15842 424 aa23.58■■□□□ 1.37
CPNE1-202ENST00000352393 ZNF385BQ569K4 471 aa23.58■■□□□ 1.37
CPNE1-202ENST00000352393 SPIN4Q56A73 249 aa23.58■■□□□ 1.37
CPNE1-202ENST00000352393 COX20Q5RI15 118 aa23.58■■□□□ 1.37
CPNE1-202ENST00000352393 DPY19L3Q6ZPD9 716 aa23.58■■□□□ 1.37
CPNE1-202ENST00000352393 DEPDC4Q8N2C3 294 aa23.58■■□□□ 1.37
CPNE1-202ENST00000352393 NIPSNAP1Q9BPW8 284 aa23.58■■□□□ 1.37
CPNE1-202ENST00000352393 THSD1Q9NS62 852 aa23.58■■□□□ 1.37
CPNE1-202ENST00000352393 PRAMEF25A6NGN4 478 aa23.57■■□□□ 1.36
CPNE1-202ENST00000352393 A8MVJ9 347 aa23.57■■□□□ 1.36
CPNE1-202ENST00000352393 TLL1O43897 1013 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms