RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 IER2Q9BTL4 223 aa12.79□□□□□ -0.36
IFT88-202ENST00000351808 SIK2Q9H0K1 926 aa12.79□□□□□ -0.36
IFT88-202ENST00000351808 GLOD4Q9HC38 313 aa12.79□□□□□ -0.36
IFT88-202ENST00000351808 TMEM45AQ9NWC5 275 aa12.79□□□□□ -0.36
IFT88-202ENST00000351808 FNIP2Q9P278 1114 aa12.79□□□□□ -0.36
IFT88-202ENST00000351808 GLS2Q9UI32 602 aa12.79□□□□□ -0.36
IFT88-202ENST00000351808 TMCC3Q9ULS5 477 aa12.79□□□□□ -0.36
IFT88-202ENST00000351808 DUSP12Q9UNI6 340 aa12.79□□□□□ -0.36
IFT88-202ENST00000351808 PRAMEF1O95521 474 aa12.79□□□□□ -0.36
IFT88-202ENST00000351808 DARSP14868 501 aaKnown RBP12.79□□□□□ -0.36
IFT88-202ENST00000351808 CXCL3P19876 107 aa12.79□□□□□ -0.36
IFT88-202ENST00000351808 ADRA1AP35348 466 aa12.79□□□□□ -0.36
IFT88-202ENST00000351808 PCDH1Q08174 1060 aa12.79□□□□□ -0.36
IFT88-202ENST00000351808 ETFDHQ16134 617 aa12.79□□□□□ -0.36
IFT88-202ENST00000351808 PAN2Q504Q3 1202 aaKnown RBP12.79□□□□□ -0.36
IFT88-202ENST00000351808 ALFQ53S48 1182 aa12.79□□□□□ -0.36
IFT88-202ENST00000351808 BCL2L15Q5TBC7 163 aa12.79□□□□□ -0.36
IFT88-202ENST00000351808 ATG9BQ674R7 924 aa12.79□□□□□ -0.36
IFT88-202ENST00000351808 RBFAQ8N0V3 343 aa12.79□□□□□ -0.36
IFT88-202ENST00000351808 PGBD3Q8N328 593 aa12.79□□□□□ -0.36
IFT88-202ENST00000351808 CLRN3Q8NCR9 226 aa12.79□□□□□ -0.36
IFT88-202ENST00000351808 RHEBL1Q8TAI7 183 aa12.79□□□□□ -0.36
IFT88-202ENST00000351808 COPS5Q92905 334 aa12.79□□□□□ -0.36
IFT88-202ENST00000351808 YIPF5Q969M3 257 aa12.79□□□□□ -0.36
IFT88-202ENST00000351808 NPY6RQ99463 290 aa12.79□□□□□ -0.36
IFT88-202ENST00000351808 ZBTB18Q99592 522 aa12.79□□□□□ -0.36
IFT88-202ENST00000351808 CDCA4Q9BXL8 241 aa12.79□□□□□ -0.36
IFT88-202ENST00000351808 PRKD2Q9BZL6 878 aa12.79□□□□□ -0.36
IFT88-202ENST00000351808 RNF146Q9NTX7 359 aa12.79□□□□□ -0.36
IFT88-202ENST00000351808 LYARQ9NX58 379 aaKnown RBP12.79□□□□□ -0.36
IFT88-202ENST00000351808 STON1Q9Y6Q2 735 aa12.79□□□□□ -0.36
IFT88-202ENST00000351808 MFSD2BA6NFX1 497 aa12.79□□□□□ -0.36
IFT88-202ENST00000351808 H0YC42 278 aa12.79□□□□□ -0.36
IFT88-202ENST00000351808 TEX46H3BTG2 121 aa12.79□□□□□ -0.36
IFT88-202ENST00000351808 HAS3O00219 553 aa12.79□□□□□ -0.36
IFT88-202ENST00000351808 CACNG3O60359 315 aa12.79□□□□□ -0.36
IFT88-202ENST00000351808 SCG5P05408 212 aa12.79□□□□□ -0.36
IFT88-202ENST00000351808 SYPP08247 313 aa12.79□□□□□ -0.36
IFT88-202ENST00000351808 SLC2A4P14672 509 aa12.79□□□□□ -0.36
IFT88-202ENST00000351808 GABRB1P18505 474 aa12.79□□□□□ -0.36
IFT88-202ENST00000351808 FDXRP22570 491 aa12.79□□□□□ -0.36
IFT88-202ENST00000351808 INPP1P49441 399 aa12.79□□□□□ -0.36
IFT88-202ENST00000351808 AP1S2P56377 157 aa12.79□□□□□ -0.36
IFT88-202ENST00000351808 CRYZQ08257 329 aaKnown RBP12.79□□□□□ -0.36
IFT88-202ENST00000351808 ADIGQ0VDE8 80 aa12.79□□□□□ -0.36
IFT88-202ENST00000351808 CRY2Q49AN0 593 aa12.79□□□□□ -0.36
IFT88-202ENST00000351808 ZNF57Q68EA5 555 aaPredicted RBP12.79□□□□□ -0.36
IFT88-202ENST00000351808 KANSL1Q7Z3B3 1105 aa12.79□□□□□ -0.36
IFT88-202ENST00000351808 SAMD14Q8IZD0 417 aaPredicted RBP12.79□□□□□ -0.36
IFT88-202ENST00000351808 AHCYL2Q96HN2 611 aaKnown RBP12.79□□□□□ -0.36
IFT88-202ENST00000351808 FCRL5Q96RD9 977 aa12.79□□□□□ -0.36
IFT88-202ENST00000351808 FEVQ99581 238 aa12.79□□□□□ -0.36
IFT88-202ENST00000351808 TFB2MQ9H5Q4 396 aaKnown RBP12.79□□□□□ -0.36
IFT88-202ENST00000351808 IMPAD1Q9NX62 359 aa12.79□□□□□ -0.36
IFT88-202ENST00000351808 SLCO1C1Q9NYB5 712 aa12.79□□□□□ -0.36
IFT88-202ENST00000351808 COMMD3Q9UBI1 195 aa12.79□□□□□ -0.36
IFT88-202ENST00000351808 PCTPQ9UKL6 214 aa12.79□□□□□ -0.36
IFT88-202ENST00000351808 CDC7O00311 574 aa12.78□□□□□ -0.36
IFT88-202ENST00000351808 QSOX1O00391 747 aa12.78□□□□□ -0.36
IFT88-202ENST00000351808 C9P02748 559 aa12.78□□□□□ -0.36
IFT88-202ENST00000351808 ESR1P03372 595 aa12.78□□□□□ -0.36
IFT88-202ENST00000351808 ERVPABLB-1P60509 514 aa12.78□□□□□ -0.36
IFT88-202ENST00000351808 STRIP1Q5VSL9 837 aa12.78□□□□□ -0.36
IFT88-202ENST00000351808 HFE2Q6ZVN8 426 aa12.78□□□□□ -0.36
IFT88-202ENST00000351808 METTL23Q86XA0 190 aa12.78□□□□□ -0.36
IFT88-202ENST00000351808 STAG3L4Q8TBR4 150 aa12.78□□□□□ -0.36
IFT88-202ENST00000351808 METTL6Q8TCB7 284 aa12.78□□□□□ -0.36
IFT88-202ENST00000351808 UCN3Q969E3 161 aa12.78□□□□□ -0.36
IFT88-202ENST00000351808 OR52E6Q96RD3 313 aa12.78□□□□□ -0.36
IFT88-202ENST00000351808 PELOQ9BRX2 385 aaKnown RBP12.78□□□□□ -0.36
IFT88-202ENST00000351808 FOLH1BQ9HBA9 442 aa12.78□□□□□ -0.36
IFT88-202ENST00000351808 TMEM184CQ9NVA4 438 aa12.78□□□□□ -0.36
IFT88-202ENST00000351808 CLEC2DQ9UHP7 191 aa12.78□□□□□ -0.36
IFT88-202ENST00000351808 SESN1Q9Y6P5 492 aa12.78□□□□□ -0.36
IFT88-202ENST00000351808 QSER1Q2KHR3 1735 aa12.78□□□□□ -0.36
IFT88-202ENST00000351808 EP400Q96L91 3159 aa12.78□□□□□ -0.36
IFT88-202ENST00000351808 KERAO60938 352 aa12.78□□□□□ -0.36
IFT88-202ENST00000351808 HLA-DQB1P01920 261 aa12.78□□□□□ -0.36
IFT88-202ENST00000351808 C1QCP02747 245 aa12.78□□□□□ -0.36
IFT88-202ENST00000351808 NDUFV1P49821 464 aa12.78□□□□□ -0.36
IFT88-202ENST00000351808 CAV3P56539 151 aa12.78□□□□□ -0.36
IFT88-202ENST00000351808 RPL38P63173 70 aaKnown RBP12.78□□□□□ -0.36
IFT88-202ENST00000351808 TMEM132DQ14C87 1099 aa12.78□□□□□ -0.36
IFT88-202ENST00000351808 TARBP2Q15633 366 aaKnown RBP12.78□□□□□ -0.36
IFT88-202ENST00000351808 SLC10A6Q3KNW5 377 aa12.78□□□□□ -0.36
IFT88-202ENST00000351808 DCAF15Q66K64 600 aa12.78□□□□□ -0.36
IFT88-202ENST00000351808 MSANTD2Q6P1R3 559 aa12.78□□□□□ -0.36
IFT88-202ENST00000351808 CNIH2Q6PI25 160 aa12.78□□□□□ -0.36
IFT88-202ENST00000351808 RANBP10Q6VN20 620 aa12.78□□□□□ -0.36
IFT88-202ENST00000351808 ZNF551Q7Z340 670 aaPredicted RBP12.78□□□□□ -0.36
IFT88-202ENST00000351808 KCT2Q8NC54 265 aa12.78□□□□□ -0.36
IFT88-202ENST00000351808 OR56A4Q8NGH8 313 aa12.78□□□□□ -0.36
IFT88-202ENST00000351808 WNT8BQ93098 351 aa12.78□□□□□ -0.36
IFT88-202ENST00000351808 TMEM203Q969S6 136 aa12.78□□□□□ -0.36
IFT88-202ENST00000351808 KIAA1143Q96AT1 154 aaPredicted RBP12.78□□□□□ -0.36
IFT88-202ENST00000351808 COQ10AQ96MF6 247 aa12.78□□□□□ -0.36
IFT88-202ENST00000351808 TMEM175Q9BSA9 504 aa12.78□□□□□ -0.36
IFT88-202ENST00000351808 PPP1R3EQ9H7J1 279 aa12.78□□□□□ -0.36
IFT88-202ENST00000351808 SEC14L4Q9UDX3 406 aa12.78□□□□□ -0.36
IFT88-202ENST00000351808 EIF2B4Q9UI10 523 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms