RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 UGT2B7P16662 529 aa20.53■□□□□ 0.88
TSPAN3-202ENST00000346495 POLR2CP19387 275 aaPredicted RBP20.53■□□□□ 0.88
TSPAN3-202ENST00000346495 RPL3P39023 403 aaKnown RBP20.53■□□□□ 0.88
TSPAN3-202ENST00000346495 GRIA3P42263 894 aa20.53■□□□□ 0.88
TSPAN3-202ENST00000346495 FNTBP49356 437 aa20.53■□□□□ 0.88
TSPAN3-202ENST00000346495 HNRNPFP52597 415 aaKnown RBP20.53■□□□□ 0.88
TSPAN3-202ENST00000346495 C21orf59P57076 290 aa20.53■□□□□ 0.88
TSPAN3-202ENST00000346495 HNRNPKP61978 463 aaKnown RBP eCLIP20.53■□□□□ 0.88
TSPAN3-202ENST00000346495 AP2B1P63010 937 aa20.53■□□□□ 0.88
TSPAN3-202ENST00000346495 PLIN5Q00G26 463 aa20.53■□□□□ 0.88
TSPAN3-202ENST00000346495 HHEXQ03014 270 aa20.53■□□□□ 0.88
TSPAN3-202ENST00000346495 TMEM35AQ53FP2 167 aa20.53■□□□□ 0.88
TSPAN3-202ENST00000346495 TSSK4Q6SA08 328 aa20.53■□□□□ 0.88
TSPAN3-202ENST00000346495 TMEM26Q6ZUK4 368 aa20.53■□□□□ 0.88
TSPAN3-202ENST00000346495 CAMKMTQ7Z624 323 aa20.53■□□□□ 0.88
TSPAN3-202ENST00000346495 PAQR7Q86WK9 346 aa20.53■□□□□ 0.88
TSPAN3-202ENST00000346495 SDR16C5Q8N3Y7 309 aa20.53■□□□□ 0.88
TSPAN3-202ENST00000346495 MFSD9Q8NBP5 474 aa20.53■□□□□ 0.88
TSPAN3-202ENST00000346495 TRPV3Q8NET8 790 aa20.53■□□□□ 0.88
TSPAN3-202ENST00000346495 OR7A2PQ8NGA2 310 aa20.53■□□□□ 0.88
TSPAN3-202ENST00000346495 OR8J3Q8NGG0 315 aa20.53■□□□□ 0.88
TSPAN3-202ENST00000346495 OR10G6Q8NH81 332 aa20.53■□□□□ 0.88
TSPAN3-202ENST00000346495 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.53■□□□□ 0.881e-7■■■□□ 17.5
TSPAN3-202ENST00000346495 SLC26A7Q8TE54 656 aa20.53■□□□□ 0.88
TSPAN3-202ENST00000346495 C16orf78Q8WTQ4 265 aa20.53■□□□□ 0.88
TSPAN3-202ENST00000346495 NELL1Q92832 810 aa20.53■□□□□ 0.88
TSPAN3-202ENST00000346495 EDAQ92838 391 aa20.53■□□□□ 0.88
TSPAN3-202ENST00000346495 RGMAQ96B86 450 aa20.53■□□□□ 0.88
TSPAN3-202ENST00000346495 PPM1MQ96MI6 270 aa20.53■□□□□ 0.88
TSPAN3-202ENST00000346495 PRMT8Q9NR22 394 aaPredicted RBP20.53■□□□□ 0.88
TSPAN3-202ENST00000346495 FAM120CQ9NX05 1096 aaKnown RBP20.53■□□□□ 0.88
TSPAN3-202ENST00000346495 AP1M2Q9Y6Q5 423 aa20.53■□□□□ 0.88
TSPAN3-202ENST00000346495 A0A096LPI6 279 aa20.53■□□□□ 0.88
TSPAN3-202ENST00000346495 GSAPA4D1B5 854 aa20.53■□□□□ 0.88
TSPAN3-202ENST00000346495 C2orf74A8MZ97 194 aa20.53■□□□□ 0.88
TSPAN3-202ENST00000346495 ZW10O43264 779 aa20.53■□□□□ 0.88
TSPAN3-202ENST00000346495 STAMBPO95630 424 aa20.53■□□□□ 0.88
TSPAN3-202ENST00000346495 AFF3P51826 1226 aaKnown RBP20.53■□□□□ 0.88
TSPAN3-202ENST00000346495 BNIP2Q12982 314 aa20.53■□□□□ 0.88
TSPAN3-202ENST00000346495 ZIC1Q15915 447 aa20.53■□□□□ 0.88
TSPAN3-202ENST00000346495 RABL3Q5HYI8 236 aa20.53■□□□□ 0.88
TSPAN3-202ENST00000346495 OR4F3Q6IEY1 312 aa20.53■□□□□ 0.88
TSPAN3-202ENST00000346495 WDR5BQ86VZ2 330 aa20.53■□□□□ 0.88
TSPAN3-202ENST00000346495 SFTPA2Q8IWL1 248 aa20.53■□□□□ 0.88
TSPAN3-202ENST00000346495 ABCA7Q8IZY2 2146 aa20.53■□□□□ 0.88
TSPAN3-202ENST00000346495 TMEM132CQ8N3T6 1108 aa20.53■□□□□ 0.88
TSPAN3-202ENST00000346495 HIPK4Q8NE63 616 aa20.53■□□□□ 0.88
TSPAN3-202ENST00000346495 REXO4Q9GZR2 422 aaKnown RBP20.53■□□□□ 0.88
TSPAN3-202ENST00000346495 ZMYND15Q9H091 742 aa20.53■□□□□ 0.88
TSPAN3-202ENST00000346495 REEP4Q9H6H4 257 aa20.53■□□□□ 0.88
TSPAN3-202ENST00000346495 S100A14Q9HCY8 104 aa20.53■□□□□ 0.88
TSPAN3-202ENST00000346495 ANKMY1Q9P2S6 941 aa20.53■□□□□ 0.88
TSPAN3-202ENST00000346495 STX18Q9P2W9 335 aaKnown RBP20.53■□□□□ 0.88
TSPAN3-202ENST00000346495 ATP6V1HQ9UI12 483 aa20.53■□□□□ 0.88
TSPAN3-202ENST00000346495 TP53BP1Q12888 1972 aaPredicted RBP20.52■□□□□ 0.88
TSPAN3-202ENST00000346495 SNRNP200O75643 2136 aaKnown RBP20.52■□□□□ 0.88
TSPAN3-202ENST00000346495 THADAQ6YHU6 1953 aa20.52■□□□□ 0.88
TSPAN3-202ENST00000346495 CAPN5O15484 640 aaPredicted RBP20.52■□□□□ 0.88
TSPAN3-202ENST00000346495 TNFSF14O43557 240 aa20.52■□□□□ 0.88
TSPAN3-202ENST00000346495 DNAJA2O60884 412 aa20.52■□□□□ 0.88
TSPAN3-202ENST00000346495 GBAP04062 536 aa20.52■□□□□ 0.88
TSPAN3-202ENST00000346495 CSNK1EP49674 416 aaKnown RBP20.52■□□□□ 0.88
TSPAN3-202ENST00000346495 ERFP50548 548 aa20.52■□□□□ 0.88
TSPAN3-202ENST00000346495 RPS15AP62244 130 aaKnown RBP20.52■□□□□ 0.88
TSPAN3-202ENST00000346495 SLC5A12Q1EHB4 618 aa20.52■□□□□ 0.88
TSPAN3-202ENST00000346495 CCNYL2Q5T2Q4 361 aa20.52■□□□□ 0.88
TSPAN3-202ENST00000346495 LRIF1Q5T3J3 769 aa20.52■□□□□ 0.88
TSPAN3-202ENST00000346495 CPTPQ5TA50 214 aa20.52■□□□□ 0.88
TSPAN3-202ENST00000346495 IKBIPQ70UQ0 350 aa20.52■□□□□ 0.88
TSPAN3-202ENST00000346495 R3HCC1LQ7Z5L2 792 aaKnown RBP20.52■□□□□ 0.88
TSPAN3-202ENST00000346495 BHLHE22Q8NFJ8 381 aaPredicted RBP20.52■□□□□ 0.88
TSPAN3-202ENST00000346495 COQ8BQ96D53 544 aa20.52■□□□□ 0.88
TSPAN3-202ENST00000346495 ANKRD27Q96NW4 1050 aa20.52■□□□□ 0.88
TSPAN3-202ENST00000346495 SH3GL1Q99961 368 aa20.52■□□□□ 0.88
TSPAN3-202ENST00000346495 PAIP1Q9H074 479 aaKnown RBP20.52■□□□□ 0.88
TSPAN3-202ENST00000346495 SERHLQ9NQF3 203 aa20.52■□□□□ 0.88
TSPAN3-202ENST00000346495 VAPAQ9P0L0 249 aa20.52■□□□□ 0.88
TSPAN3-202ENST00000346495 NIPSNAP3AQ9UFN0 247 aaPredicted RBP20.52■□□□□ 0.88
TSPAN3-202ENST00000346495 ADAM29Q9UKF5 820 aa20.52■□□□□ 0.88
TSPAN3-202ENST00000346495 AP3M1Q9Y2T2 418 aa20.52■□□□□ 0.88
TSPAN3-202ENST00000346495 WBP11Q9Y2W2 641 aaKnown RBP20.52■□□□□ 0.88
TSPAN3-202ENST00000346495 PCDHGA4Q9Y5G9 962 aa20.52■□□□□ 0.88
TSPAN3-202ENST00000346495 ARHGAP10A1A4S6 786 aa20.51■□□□□ 0.87
TSPAN3-202ENST00000346495 GABRR3A8MPY1 467 aa20.51■□□□□ 0.87
TSPAN3-202ENST00000346495 YY2O15391 372 aa20.51■□□□□ 0.87
TSPAN3-202ENST00000346495 DFNA5O60443 496 aa20.51■□□□□ 0.87
TSPAN3-202ENST00000346495 KLHL18O94889 574 aa20.51■□□□□ 0.87
TSPAN3-202ENST00000346495 SERPIND1P05546 499 aa20.51■□□□□ 0.87
TSPAN3-202ENST00000346495 TPP2P29144 1249 aaPredicted RBP20.51■□□□□ 0.87
TSPAN3-202ENST00000346495 BSGP35613 385 aa20.51■□□□□ 0.87
TSPAN3-202ENST00000346495 GSTM5P46439 218 aa20.51■□□□□ 0.87
TSPAN3-202ENST00000346495 LIPEQ05469 1076 aa20.51■□□□□ 0.87
TSPAN3-202ENST00000346495 NUDT13Q86X67 352 aa20.51■□□□□ 0.87
TSPAN3-202ENST00000346495 MTERF3Q96E29 417 aa20.51■□□□□ 0.87
TSPAN3-202ENST00000346495 DUSP26Q9BV47 211 aa20.51■□□□□ 0.87
TSPAN3-202ENST00000346495 ZNF717Q9BY31 904 aaPredicted RBP20.51■□□□□ 0.87
TSPAN3-202ENST00000346495 PCDHAC1Q9H158 963 aa20.51■□□□□ 0.87
TSPAN3-202ENST00000346495 MUC13Q9H3R2 512 aa20.51■□□□□ 0.87
TSPAN3-202ENST00000346495 ALG2Q9H553 416 aa20.51■□□□□ 0.87
TSPAN3-202ENST00000346495 ANGPTL2Q9UKU9 493 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms