RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 NKG7Q16617 165 aa15.3■□□□□ 0.04
RAB5C-201ENST00000346213 ZC3H12BQ5HYM0 836 aaKnown RBP15.3■□□□□ 0.04
RAB5C-201ENST00000346213 PRAMEF13Q5VWM6 474 aa15.3■□□□□ 0.04
RAB5C-201ENST00000346213 CES4AQ5XG92 561 aa15.3■□□□□ 0.04
RAB5C-201ENST00000346213 APLFQ8IW19 511 aaPredicted RBP15.3■□□□□ 0.04
RAB5C-201ENST00000346213 ZNF740Q8NDX6 193 aa15.3■□□□□ 0.04
RAB5C-201ENST00000346213 RDH11Q8TC12 318 aa15.3■□□□□ 0.04
RAB5C-201ENST00000346213 ADNPQ9H2P0 1102 aa15.3■□□□□ 0.04
RAB5C-201ENST00000346213 NPHS2Q9NP85 383 aa15.3■□□□□ 0.04
RAB5C-201ENST00000346213 THAP1Q9NVV9 213 aa15.3■□□□□ 0.04
RAB5C-201ENST00000346213 IFT80Q9P2H3 777 aaPredicted RBP15.3■□□□□ 0.04
RAB5C-201ENST00000346213 NDOR1Q9UHB4 597 aa15.3■□□□□ 0.04
RAB5C-201ENST00000346213 SRPK3Q9UPE1 567 aa15.3■□□□□ 0.04
RAB5C-201ENST00000346213 CCDC88CQ9P219 2028 aa15.3■□□□□ 0.04
RAB5C-201ENST00000346213 TNRC6AQ8NDV7 1962 aaKnown RBP15.3■□□□□ 0.04
RAB5C-201ENST00000346213 UBR5O95071 2799 aaPredicted RBP15.29■□□□□ 0.04
RAB5C-201ENST00000346213 HYKKA2RU49 373 aa15.29■□□□□ 0.04
RAB5C-201ENST00000346213 MAP3K7O43318 606 aa15.29■□□□□ 0.04
RAB5C-201ENST00000346213 SUV39H1O43463 412 aa15.29■□□□□ 0.04
RAB5C-201ENST00000346213 GUCA1CO95843 209 aa15.29■□□□□ 0.04
RAB5C-201ENST00000346213 C8GP07360 202 aa15.29■□□□□ 0.04
RAB5C-201ENST00000346213 CDH1P12830 882 aa15.29■□□□□ 0.04
RAB5C-201ENST00000346213 NPPBP16860 134 aa15.29■□□□□ 0.04
RAB5C-201ENST00000346213 GRK2P25098 689 aa15.29■□□□□ 0.04
RAB5C-201ENST00000346213 OTX2P32243 289 aa15.29■□□□□ 0.04
RAB5C-201ENST00000346213 SLC12A2P55011 1212 aa15.29■□□□□ 0.04
RAB5C-201ENST00000346213 IL2P60568 153 aa15.29■□□□□ 0.04
RAB5C-201ENST00000346213 DLG1Q12959 904 aa15.29■□□□□ 0.04
RAB5C-201ENST00000346213 TSNQ15631 228 aaKnown RBP15.29■□□□□ 0.04
RAB5C-201ENST00000346213 SYT16Q17RD7 645 aa15.29■□□□□ 0.04
RAB5C-201ENST00000346213 FBXO48Q5FWF7 155 aa15.29■□□□□ 0.04
RAB5C-201ENST00000346213 CCDC91Q7Z6B0 441 aa15.29■□□□□ 0.04
RAB5C-201ENST00000346213 C10orf107Q8IVU9 208 aa15.29■□□□□ 0.04
RAB5C-201ENST00000346213 CENPLQ8N0S6 344 aaPredicted RBP15.29■□□□□ 0.04
RAB5C-201ENST00000346213 RAB42Q8N4Z0 105 aa15.29■□□□□ 0.04
RAB5C-201ENST00000346213 GBP7Q8N8V2 638 aaPredicted RBP15.29■□□□□ 0.04
RAB5C-201ENST00000346213 AMER3Q8N944 861 aa15.29■□□□□ 0.04
RAB5C-201ENST00000346213 OR2Y1Q8NGV0 311 aa15.29■□□□□ 0.04
RAB5C-201ENST00000346213 OR6Y1Q8NGX8 325 aa15.29■□□□□ 0.04
RAB5C-201ENST00000346213 OR56A3Q8NH54 315 aa15.29■□□□□ 0.04
RAB5C-201ENST00000346213 PPP1R14CQ8TAE6 165 aa15.29■□□□□ 0.04
RAB5C-201ENST00000346213 C9orf43Q8TAL5 461 aaPredicted RBP15.29■□□□□ 0.04
RAB5C-201ENST00000346213 TSPAN17Q96FV3 270 aa15.29■□□□□ 0.04
RAB5C-201ENST00000346213 THOC1Q96FV9 657 aaKnown RBP15.29■□□□□ 0.04
RAB5C-201ENST00000346213 DPH2Q9BQC3 489 aaPredicted RBP15.29■□□□□ 0.04
RAB5C-201ENST00000346213 ING2Q9H160 280 aa15.29■□□□□ 0.04
RAB5C-201ENST00000346213 SOX17Q9H6I2 414 aaPredicted RBP15.29■□□□□ 0.04
RAB5C-201ENST00000346213 CCDC177Q9NQR7 707 aaPredicted RBP15.29■□□□□ 0.04
RAB5C-201ENST00000346213 TXLNGQ9NUQ3 528 aa15.29■□□□□ 0.04
RAB5C-201ENST00000346213 TUBD1Q9UJT1 453 aa15.29■□□□□ 0.04
RAB5C-201ENST00000346213 SPTA1P02549 2419 aa15.29■□□□□ 0.04
RAB5C-201ENST00000346213 ANKRD65E5RJM6 399 aa15.28■□□□□ 0.04
RAB5C-201ENST00000346213 G3V2L1 256 aa15.28■□□□□ 0.04
RAB5C-201ENST00000346213 SLC16A5O15375 505 aa15.28■□□□□ 0.04
RAB5C-201ENST00000346213 KLHL2O95198 593 aa15.28■□□□□ 0.04
RAB5C-201ENST00000346213 SERPINE1P05121 402 aa15.28■□□□□ 0.04
RAB5C-201ENST00000346213 HBQ1P09105 142 aa15.28■□□□□ 0.04
RAB5C-201ENST00000346213 RGS4P49798 205 aa15.28■□□□□ 0.04
RAB5C-201ENST00000346213 RAPSNQ13702 412 aa15.28■□□□□ 0.04
RAB5C-201ENST00000346213 GRM7Q14831 915 aa15.28■□□□□ 0.04
RAB5C-201ENST00000346213 TSNAXIP1Q2TAA8 658 aa15.28■□□□□ 0.04
RAB5C-201ENST00000346213 GALNTL6Q49A17 601 aa15.28■□□□□ 0.04
RAB5C-201ENST00000346213 OVCH1Q7RTY7 1134 aa15.28■□□□□ 0.04
RAB5C-201ENST00000346213 LAPTM4BQ86VI4 370 aa15.28■□□□□ 0.04
RAB5C-201ENST00000346213 CSNK1A1LQ8N752 337 aa15.28■□□□□ 0.04
RAB5C-201ENST00000346213 PTERQ96BW5 349 aa15.28■□□□□ 0.04
RAB5C-201ENST00000346213 MOCOSQ96EN8 888 aa15.28■□□□□ 0.04
RAB5C-201ENST00000346213 PDLIM5Q96HC4 596 aaKnown RBP15.28■□□□□ 0.04
RAB5C-201ENST00000346213 NUDT9Q9BW91 350 aa15.28■□□□□ 0.04
RAB5C-201ENST00000346213 ASB1Q9Y576 335 aa15.28■□□□□ 0.04
RAB5C-201ENST00000346213 VSTM2BA6NLU5 285 aa15.28■□□□□ 0.04
RAB5C-201ENST00000346213 SOCS6O14544 535 aa15.28■□□□□ 0.04
RAB5C-201ENST00000346213 SRPX2O60687 465 aaPredicted RBP15.28■□□□□ 0.04
RAB5C-201ENST00000346213 DNAJB6O75190 326 aa15.28■□□□□ 0.04
RAB5C-201ENST00000346213 CEACAM4O75871 244 aa15.28■□□□□ 0.04
RAB5C-201ENST00000346213 DCTN3O75935 186 aa15.28■□□□□ 0.04
RAB5C-201ENST00000346213 B3GALT4O96024 378 aa15.28■□□□□ 0.04
RAB5C-201ENST00000346213 AGXTP21549 392 aa15.28■□□□□ 0.04
RAB5C-201ENST00000346213 HSD17B2P37059 387 aa15.28■□□□□ 0.04
RAB5C-201ENST00000346213 KCNC1P48547 511 aa15.28■□□□□ 0.04
RAB5C-201ENST00000346213 MAT1AQ00266 395 aaKnown RBP15.28■□□□□ 0.04
RAB5C-201ENST00000346213 TCTE1Q5JU00 501 aa15.28■□□□□ 0.04
RAB5C-201ENST00000346213 CATSPEREQ5SY80 951 aa15.28■□□□□ 0.04
RAB5C-201ENST00000346213 ADCK2Q7Z695 626 aa15.28■□□□□ 0.04
RAB5C-201ENST00000346213 ZNF605Q86T29 641 aa15.28■□□□□ 0.04
RAB5C-201ENST00000346213 CRLF3Q8IUI8 442 aa15.28■□□□□ 0.04
RAB5C-201ENST00000346213 TMEM151AQ8N4L1 468 aa15.28■□□□□ 0.04
RAB5C-201ENST00000346213 FITM2Q8N6M3 262 aa15.28■□□□□ 0.04
RAB5C-201ENST00000346213 FDCSPQ8NFU4 85 aa15.28■□□□□ 0.04
RAB5C-201ENST00000346213 RFWD2Q8NHY2 731 aa15.28■□□□□ 0.04
RAB5C-201ENST00000346213 MCOLN3Q8TDD5 553 aa15.28■□□□□ 0.04
RAB5C-201ENST00000346213 KCTD4Q8WVF5 259 aa15.28■□□□□ 0.04
RAB5C-201ENST00000346213 SREK1Q8WXA9 508 aaKnown RBP15.28■□□□□ 0.04
RAB5C-201ENST00000346213 GPR78Q96P69 363 aa15.28■□□□□ 0.04
RAB5C-201ENST00000346213 AICDAQ9GZX7 198 aa15.28■□□□□ 0.04
RAB5C-201ENST00000346213 KCNK13Q9HB14 408 aa15.28■□□□□ 0.04
RAB5C-201ENST00000346213 ANKMY1Q9P2S6 941 aa15.28■□□□□ 0.04
RAB5C-201ENST00000346213 HEATR5BQ9P2D3 2071 aa15.28■□□□□ 0.04
RAB5C-201ENST00000346213 C4orf51C9J302 202 aa15.27■□□□□ 0.03
RAB5C-201ENST00000346213 C9J4A7 227 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms