RNA–Protein interactions for RNA: ENST00000344638.4

DEFB108F-201, Transcript of defensin beta 108F (pseudogene), humanhuman

BASIC

Gene DEFB108F, Length 222 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEFB108F-201ENST00000344638 ZNF416Q9BWM5 594 aa3.1□□□□□ -1.91
DEFB108F-201ENST00000344638 FTHL17Q9BXU8 183 aa3.1□□□□□ -1.91
DEFB108F-201ENST00000344638 KRTAP4-6Q9BYQ5 205 aa3.1□□□□□ -1.91
DEFB108F-201ENST00000344638 PUS3Q9BZE2 481 aaKnown RBP3.1□□□□□ -1.91
DEFB108F-201ENST00000344638 NMNAT2Q9BZQ4 307 aa3.1□□□□□ -1.91
DEFB108F-201ENST00000344638 SEMA4CQ9C0C4 833 aa3.1□□□□□ -1.91
DEFB108F-201ENST00000344638 DCLRE1BQ9H816 532 aa3.1□□□□□ -1.91
DEFB108F-201ENST00000344638 RAVER2Q9HCJ3 691 aaKnown RBP3.1□□□□□ -1.91
DEFB108F-201ENST00000344638 VAT1LQ9HCJ6 419 aa3.1□□□□□ -1.91
DEFB108F-201ENST00000344638 YAE1D1Q9NRH1 226 aa3.1□□□□□ -1.91
DEFB108F-201ENST00000344638 DDX28Q9NUL7 540 aaKnown RBP3.1□□□□□ -1.91
DEFB108F-201ENST00000344638 SLC38A7Q9NVC3 462 aa3.1□□□□□ -1.91
DEFB108F-201ENST00000344638 SMPD3Q9NY59 655 aaPredicted RBP3.1□□□□□ -1.91
DEFB108F-201ENST00000344638 STUB1Q9UNE7 303 aa3.1□□□□□ -1.91
DEFB108F-201ENST00000344638 SNX6Q9UNH7 406 aa3.1□□□□□ -1.91
DEFB108F-201ENST00000344638 SMC3Q9UQE7 1217 aa3.1□□□□□ -1.91
DEFB108F-201ENST00000344638 DLGAP4Q9Y2H0 992 aa3.1□□□□□ -1.91
DEFB108F-201ENST00000344638 ABCC4O15439 1325 aa3.1□□□□□ -1.91
DEFB108F-201ENST00000344638 ARID2Q68CP9 1835 aa3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 SPATA31D1Q6ZQQ2 1576 aa3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 FAM230AA0A1W2PPH8 454 aa3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 OR6C75A6NL08 312 aa3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 CXCL11O14625 94 aa3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 ZNF197O14709 1029 aa3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 TLX2O43763 284 aaPredicted RBP3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 GPRIN2O60269 458 aa3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 CYTIPO60759 359 aa3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 VPS26AO75436 327 aa3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 IDH1O75874 414 aaKnown RBP3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 APOHP02749 345 aaPredicted RBP3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 RAF1P04049 648 aa3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 CLUP10909 449 aa3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 ODC1P11926 461 aa3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 GNSP15586 552 aa3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 CDH3P22223 829 aa3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 IL4RP24394 825 aa3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 HLA-FP30511 346 aa3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 HOXD3P31249 432 aaPredicted RBP3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 SFTPDP35247 375 aa3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 AHRP35869 848 aa3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 GNL1P36915 607 aaPredicted RBP3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 ELLP55199 621 aaPredicted RBP3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 NLRP11P59045 1033 aaKnown RBP3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 SSTP61278 116 aa3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 SP3Q02447 781 aa3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 HSF2Q03933 536 aa3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 TRAP1Q12931 704 aaKnown RBP3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 DMP1Q13316 513 aaPredicted RBP3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 ADPRMQ3LIE5 342 aa3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 GPR33Q49SQ1 333 aa3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 CCDC152Q4G0S7 254 aa3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 ARMCX4Q5H9R4 360 aa3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 EFHC1Q5JVL4 640 aa3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 DCAF10Q5QP82 559 aa3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 C9orf50Q5SZB4 431 aa3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 STXBP5Q5T5C0 1151 aa3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 CRIP3Q6Q6R5 217 aa3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 FAM159AQ6UWV7 190 aa3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 BNIPLQ7Z465 357 aa3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 MRGPRGQ86SM5 289 aa3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 LONP2Q86WA8 852 aa3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 ZC3H3Q8IXZ2 948 aaKnown RBP3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 CDK20Q8IZL9 346 aa3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 Q8N1X5 172 aa3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 PRSS35Q8N3Z0 413 aa3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 FADS6Q8N9I5 356 aa3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 GPRC5AQ8NFJ5 357 aa3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 RDM1Q8NG50 284 aa3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 PHLDA1Q8WV24 401 aaPredicted RBP3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 HSD17B8Q92506 261 aa3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 SEPT8Q92599 483 aa3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 MTBPQ96DY7 904 aa3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 NEURL2Q9BR09 285 aa3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 POLR1EQ9GZS1 481 aaKnown RBP3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 MIS12Q9H081 205 aa3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 SLITRK6Q9H5Y7 841 aa3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 SDR39U1Q9NRG7 319 aaPredicted RBP3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 OLFML3Q9NRN5 406 aa3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 HOMER3Q9NSC5 361 aa3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 TRNAU1APQ9NX07 287 aaKnown RBP3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 SPHK1Q9NYA1 384 aa3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 GTSE1Q9NYZ3 720 aa3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 SMARCAL1Q9NZC9 954 aa3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 COX16Q9P0S2 106 aa3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 SIX4Q9UIU6 781 aa3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 RALYQ9UKM9 306 aaKnown RBP3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 PCDHA7Q9UN72 937 aa3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 IL16Q14005 1332 aa3.09□□□□□ -1.91
DEFB108F-201ENST00000344638 A0A0G2JPF8 293 aa3.08□□□□□ -1.92
DEFB108F-201ENST00000344638 CCDC162PA2VCL2 907 aa3.08□□□□□ -1.92
DEFB108F-201ENST00000344638 ANKRD61A6NGH8 418 aa3.08□□□□□ -1.92
DEFB108F-201ENST00000344638 C2orf81A6NN90 581 aa3.08□□□□□ -1.92
DEFB108F-201ENST00000344638 CCDC169A6NNP5 214 aa3.08□□□□□ -1.92
DEFB108F-201ENST00000344638 C4orf47A7E2U8 309 aa3.08□□□□□ -1.92
DEFB108F-201ENST00000344638 SRRM4A7MD48 611 aaKnown RBP3.08□□□□□ -1.92
DEFB108F-201ENST00000344638 HNRNPCL3B7ZW38 293 aa3.08□□□□□ -1.92
DEFB108F-201ENST00000344638 PPEF2O14830 753 aa3.08□□□□□ -1.92
DEFB108F-201ENST00000344638 XPO1O14980 1071 aaKnown RBP3.08□□□□□ -1.92
DEFB108F-201ENST00000344638 CHUKO15111 745 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms