RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 TRIM73Q86UV7 250 aa12.99□□□□□ -0.33
CDC42-202ENST00000344548 OR8J2Q8NGG1 315 aa12.99□□□□□ -0.33
CDC42-202ENST00000344548 CREB3L4Q8TEY5 395 aa12.99□□□□□ -0.33
CDC42-202ENST00000344548 C16orf78Q8WTQ4 265 aa12.99□□□□□ -0.33
CDC42-202ENST00000344548 RSRC1Q96IZ7 334 aaKnown RBP12.99□□□□□ -0.33
CDC42-202ENST00000344548 PCBD2Q9H0N5 130 aa12.99□□□□□ -0.33
CDC42-202ENST00000344548 TAAR2Q9P1P5 351 aa12.99□□□□□ -0.33
CDC42-202ENST00000344548 ACTR3BQ9P1U1 418 aa12.99□□□□□ -0.33
CDC42-202ENST00000344548 CACNA1IQ9P0X4 2223 aa12.99□□□□□ -0.33
CDC42-202ENST00000344548 TCRBV5S2A0A599 114 aa12.99□□□□□ -0.33
CDC42-202ENST00000344548 ISM1B1AKI9 464 aa12.99□□□□□ -0.33
CDC42-202ENST00000344548 RFXANKO14593 260 aa12.99□□□□□ -0.33
CDC42-202ENST00000344548 PRAMEF10O60809 474 aa12.99□□□□□ -0.33
CDC42-202ENST00000344548 MYO1DO94832 1006 aa12.99□□□□□ -0.33
CDC42-202ENST00000344548 TNFP01375 233 aa12.99□□□□□ -0.33
CDC42-202ENST00000344548 CHRM5P08912 532 aaPredicted RBP12.99□□□□□ -0.33
CDC42-202ENST00000344548 PTX3P26022 381 aaPredicted RBP12.99□□□□□ -0.33
CDC42-202ENST00000344548 BSGP35613 385 aa12.99□□□□□ -0.33
CDC42-202ENST00000344548 HYAL2Q12891 473 aa12.99□□□□□ -0.33
CDC42-202ENST00000344548 FXNQ16595 210 aa12.99□□□□□ -0.33
CDC42-202ENST00000344548 SFT2D3Q587I9 215 aa12.99□□□□□ -0.33
CDC42-202ENST00000344548 PRRT3Q5FWE3 981 aa12.99□□□□□ -0.33
CDC42-202ENST00000344548 NAGSQ8N159 534 aa12.99□□□□□ -0.33
CDC42-202ENST00000344548 TMEM102Q8N9M5 508 aaPredicted RBP12.99□□□□□ -0.33
CDC42-202ENST00000344548 OR8J3Q8NGG0 315 aa12.99□□□□□ -0.33
CDC42-202ENST00000344548 LRTOMTQ8WZ04 291 aa12.99□□□□□ -0.33
CDC42-202ENST00000344548 CXorf40BQ96DE9 158 aa12.99□□□□□ -0.33
CDC42-202ENST00000344548 METTL2AQ96IZ6 378 aaKnown RBP12.99□□□□□ -0.33
CDC42-202ENST00000344548 CPPED1Q9BRF8 314 aaPredicted RBP12.99□□□□□ -0.33
CDC42-202ENST00000344548 MRPS30Q9NP92 439 aaKnown RBP12.99□□□□□ -0.33
CDC42-202ENST00000344548 CD320Q9NPF0 282 aa12.99□□□□□ -0.33
CDC42-202ENST00000344548 SIRT5Q9NXA8 310 aa12.99□□□□□ -0.33
CDC42-202ENST00000344548 SH3BP4Q9P0V3 963 aa12.99□□□□□ -0.33
CDC42-202ENST00000344548 DMTF1Q9Y222 760 aa12.99□□□□□ -0.33
CDC42-202ENST00000344548 MRPS17Q9Y2R5 130 aaKnown RBP12.99□□□□□ -0.33
CDC42-202ENST00000344548 COLEC10Q9Y6Z7 277 aa12.99□□□□□ -0.33
CDC42-202ENST00000344548 V9GYQ6 96 aa12.99□□□□□ -0.33
CDC42-202ENST00000344548 A0A096LPI6 279 aa12.98□□□□□ -0.33
CDC42-202ENST00000344548 WASHC1A8K0Z3 465 aa12.98□□□□□ -0.33
CDC42-202ENST00000344548 ZNF217O75362 1048 aa12.98□□□□□ -0.33
CDC42-202ENST00000344548 CPSF4O95639 269 aaKnown RBP12.98□□□□□ -0.33
CDC42-202ENST00000344548 SERPIND1P05546 499 aa12.98□□□□□ -0.33
CDC42-202ENST00000344548 HTR1EP28566 365 aa12.98□□□□□ -0.33
CDC42-202ENST00000344548 GZMMP51124 257 aa12.98□□□□□ -0.33
CDC42-202ENST00000344548 C21orf58P58505 322 aa12.98□□□□□ -0.33
CDC42-202ENST00000344548 ZNF763Q0D2J5 394 aa12.98□□□□□ -0.33
CDC42-202ENST00000344548 ILF3Q12906 894 aaKnown RBP eCLIP12.98□□□□□ -0.33
CDC42-202ENST00000344548 TRIP10Q15642 601 aa12.98□□□□□ -0.33
CDC42-202ENST00000344548 HMBOX1Q6NT76 420 aa12.98□□□□□ -0.33
CDC42-202ENST00000344548 RAB42Q8N4Z0 105 aa12.98□□□□□ -0.33
CDC42-202ENST00000344548 UBE2E3Q969T4 207 aa12.98□□□□□ -0.33
CDC42-202ENST00000344548 ZUFSPQ96AP4 578 aa12.98□□□□□ -0.33
CDC42-202ENST00000344548 CIDECQ96AQ7 238 aaPredicted RBP12.98□□□□□ -0.33
CDC42-202ENST00000344548 ECSITQ9BQ95 431 aa12.98□□□□□ -0.33
CDC42-202ENST00000344548 DUSP26Q9BV47 211 aa12.98□□□□□ -0.33
CDC42-202ENST00000344548 KLHL25Q9H0H3 589 aa12.98□□□□□ -0.33
CDC42-202ENST00000344548 SEMA6AQ9H2E6 1030 aa12.98□□□□□ -0.33
CDC42-202ENST00000344548 KAT8Q9H7Z6 458 aaKnown RBP12.98□□□□□ -0.33
CDC42-202ENST00000344548 AP4S1Q9Y587 144 aa12.98□□□□□ -0.33
CDC42-202ENST00000344548 EML5Q05BV3 1969 aa12.97□□□□□ -0.33
CDC42-202ENST00000344548 METTL12A8MUP2 240 aa12.97□□□□□ -0.33
CDC42-202ENST00000344548 TMPRSS11DO60235 418 aa12.97□□□□□ -0.33
CDC42-202ENST00000344548 TIPRLO75663 272 aa12.97□□□□□ -0.33
CDC42-202ENST00000344548 IL3P08700 152 aa12.97□□□□□ -0.33
CDC42-202ENST00000344548 BCKDHBP21953 392 aa12.97□□□□□ -0.33
CDC42-202ENST00000344548 BNIP2Q12982 314 aa12.97□□□□□ -0.33
CDC42-202ENST00000344548 C16orf72Q14CZ0 275 aa12.97□□□□□ -0.33
CDC42-202ENST00000344548 IZUMO2Q6UXV1 221 aa12.97□□□□□ -0.33
CDC42-202ENST00000344548 AMIGO2Q86SJ2 522 aa12.97□□□□□ -0.33
CDC42-202ENST00000344548 ADGRG5Q8IZF4 528 aa12.97□□□□□ -0.33
CDC42-202ENST00000344548 FAM86B1Q8N7N1 296 aa12.97□□□□□ -0.33
CDC42-202ENST00000344548 ZNF548Q8NEK5 533 aaPredicted RBP12.97□□□□□ -0.33
CDC42-202ENST00000344548 PJA1Q8NG27 643 aa12.97□□□□□ -0.33
CDC42-202ENST00000344548 PNPT1Q8TCS8 783 aaKnown RBP12.97□□□□□ -0.33
CDC42-202ENST00000344548 COQ8BQ96D53 544 aa12.97□□□□□ -0.33
CDC42-202ENST00000344548 KLHDC7BQ96G42 594 aa12.97□□□□□ -0.33
CDC42-202ENST00000344548 ITCHQ96J02 903 aa12.97□□□□□ -0.33
CDC42-202ENST00000344548 PANX1Q96RD7 426 aa12.97□□□□□ -0.33
CDC42-202ENST00000344548 C5AR2Q9P296 337 aa12.97□□□□□ -0.33
CDC42-202ENST00000344548 SNX13Q9Y5W8 968 aa12.97□□□□□ -0.33
CDC42-202ENST00000344548 C15orf38-AP3S2A0A0A6YYH1 394 aa12.97□□□□□ -0.33
CDC42-202ENST00000344548 CASQ2O14958 399 aaPredicted RBP12.97□□□□□ -0.33
CDC42-202ENST00000344548 MAP3K13O43283 966 aa12.97□□□□□ -0.33
CDC42-202ENST00000344548 PRMT3O60678 531 aa12.97□□□□□ -0.33
CDC42-202ENST00000344548 ERN1O75460 977 aaKnown RBP12.97□□□□□ -0.33
CDC42-202ENST00000344548 MT-ND1P03886 318 aa12.97□□□□□ -0.33
CDC42-202ENST00000344548 FURINP09958 794 aa12.97□□□□□ -0.33
CDC42-202ENST00000344548 PLA2G16P53816 162 aa12.97□□□□□ -0.33
CDC42-202ENST00000344548 SRSF11Q05519 484 aaKnown RBP12.97□□□□□ -0.33
CDC42-202ENST00000344548 C2orf80Q0P641 193 aa12.97□□□□□ -0.33
CDC42-202ENST00000344548 GAB1Q13480 694 aa12.97□□□□□ -0.33
CDC42-202ENST00000344548 C10orf62Q5T681 223 aaPredicted RBP12.97□□□□□ -0.33
CDC42-202ENST00000344548 CPTPQ5TA50 214 aa12.97□□□□□ -0.33
CDC42-202ENST00000344548 GLYATQ6IB77 296 aa12.97□□□□□ -0.33
CDC42-202ENST00000344548 FAM71E1Q6IPT2 247 aa12.97□□□□□ -0.33
CDC42-202ENST00000344548 ZNF425Q6IV72 752 aa12.97□□□□□ -0.33
CDC42-202ENST00000344548 ARPINQ7Z6K5 226 aa12.97□□□□□ -0.33
CDC42-202ENST00000344548 FAM9CQ8IZT9 166 aa12.97□□□□□ -0.33
CDC42-202ENST00000344548 SLC37A2Q8TED4 501 aa12.97□□□□□ -0.33
CDC42-202ENST00000344548 DNAJC9Q8WXX5 260 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms