RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 MRPL10Q7Z7H8 261 aaKnown RBP9.32□□□□□ -0.92
HOXA1-201ENST00000343060 TRIM69Q86WT6 500 aa9.32□□□□□ -0.92
HOXA1-201ENST00000343060 LGI4Q8N135 537 aa9.32□□□□□ -0.92
HOXA1-201ENST00000343060 LSMEM1Q8N8F7 131 aa9.32□□□□□ -0.92
HOXA1-201ENST00000343060 WDR36Q8NI36 951 aaKnown RBP9.32□□□□□ -0.92
HOXA1-201ENST00000343060 CSGALNACT1Q8TDX6 532 aa9.32□□□□□ -0.92
HOXA1-201ENST00000343060 TPD52L3Q96J77 140 aa9.32□□□□□ -0.92
HOXA1-201ENST00000343060 SUSD3Q96L08 255 aa9.32□□□□□ -0.92
HOXA1-201ENST00000343060 PANX1Q96RD7 426 aa9.32□□□□□ -0.92
HOXA1-201ENST00000343060 MAPKAP1Q9BPZ7 522 aa9.32□□□□□ -0.92
HOXA1-201ENST00000343060 CNPPD1Q9BV87 410 aa9.32□□□□□ -0.92
HOXA1-201ENST00000343060 ABHD16BQ9H3Z7 469 aa9.32□□□□□ -0.92
HOXA1-201ENST00000343060 FAM83DQ9H4H8 585 aa9.32□□□□□ -0.92
HOXA1-201ENST00000343060 RETREG1Q9H6L5 497 aa9.32□□□□□ -0.92
HOXA1-201ENST00000343060 ZNF556Q9HAH1 456 aa9.32□□□□□ -0.92
HOXA1-201ENST00000343060 SLC25A19Q9HC21 320 aa9.32□□□□□ -0.92
HOXA1-201ENST00000343060 TIGARQ9NQ88 270 aa9.32□□□□□ -0.92
HOXA1-201ENST00000343060 TLR8Q9NR97 1041 aaKnown RBP9.32□□□□□ -0.92
HOXA1-201ENST00000343060 THSD1Q9NS62 852 aa9.32□□□□□ -0.92
HOXA1-201ENST00000343060 NDUFB11Q9NX14 153 aa9.32□□□□□ -0.92
HOXA1-201ENST00000343060 IL17CQ9P0M4 197 aa9.32□□□□□ -0.92
HOXA1-201ENST00000343060 ENOPH1Q9UHY7 261 aa9.32□□□□□ -0.92
HOXA1-201ENST00000343060 STUB1Q9UNE7 303 aa9.32□□□□□ -0.92
HOXA1-201ENST00000343060 PCDHB11Q9Y5F2 797 aa9.32□□□□□ -0.92
HOXA1-201ENST00000343060 A0A0D9SEW6 157 aa9.31□□□□□ -0.92
HOXA1-201ENST00000343060 TEX51A0A1B0GUA7 166 aa9.31□□□□□ -0.92
HOXA1-201ENST00000343060 ARRDC5A6NEK1 342 aa9.31□□□□□ -0.92
HOXA1-201ENST00000343060 OR6C70A6NIJ9 312 aa9.31□□□□□ -0.92
HOXA1-201ENST00000343060 ZAR1LA6NP61 321 aa9.31□□□□□ -0.92
HOXA1-201ENST00000343060 ANKRD66B4E2M5 251 aa9.31□□□□□ -0.92
HOXA1-201ENST00000343060 PLA2G10O15496 165 aa9.31□□□□□ -0.92
HOXA1-201ENST00000343060 GPR39O43194 453 aa9.31□□□□□ -0.92
HOXA1-201ENST00000343060 ARHGEF9O43307 516 aa9.31□□□□□ -0.92
HOXA1-201ENST00000343060 PROM1O43490 865 aa9.31□□□□□ -0.92
HOXA1-201ENST00000343060 GCM2O75603 506 aaPredicted RBP9.31□□□□□ -0.92
HOXA1-201ENST00000343060 STK16O75716 305 aa9.31□□□□□ -0.92
HOXA1-201ENST00000343060 B3GAT3O94766 335 aa9.31□□□□□ -0.92
HOXA1-201ENST00000343060 ALAS2P22557 587 aa9.31□□□□□ -0.92
HOXA1-201ENST00000343060 CDC42P60953 191 aa9.31□□□□□ -0.92
HOXA1-201ENST00000343060 RING1Q06587 406 aa9.31□□□□□ -0.92
HOXA1-201ENST00000343060 CACNB2Q08289 660 aaPredicted RBP9.31□□□□□ -0.92
HOXA1-201ENST00000343060 ELOAQ14241 798 aaKnown RBP9.31□□□□□ -0.92
HOXA1-201ENST00000343060 QPRTQ15274 297 aa9.31□□□□□ -0.92
HOXA1-201ENST00000343060 DPY19L3Q6ZPD9 716 aa9.31□□□□□ -0.92
HOXA1-201ENST00000343060 FAM20CQ8IXL6 584 aa9.31□□□□□ -0.92
HOXA1-201ENST00000343060 CLDN22Q8N7P3 220 aa9.31□□□□□ -0.92
HOXA1-201ENST00000343060 TP53I13Q8NBR0 393 aaPredicted RBP9.31□□□□□ -0.92
HOXA1-201ENST00000343060 SELENOMQ8WWX9 145 aa9.31□□□□□ -0.92
HOXA1-201ENST00000343060 DEDD2Q8WXF8 326 aa9.31□□□□□ -0.92
HOXA1-201ENST00000343060 SLC25A46Q96AG3 418 aa9.31□□□□□ -0.92
HOXA1-201ENST00000343060 TRMT61AQ96FX7 289 aaKnown RBP9.31□□□□□ -0.92
HOXA1-201ENST00000343060 APIPQ96GX9 242 aa9.31□□□□□ -0.92
HOXA1-201ENST00000343060 MAP6Q96JE9 813 aa9.31□□□□□ -0.92
HOXA1-201ENST00000343060 SAMD11Q96NU1 681 aa9.31□□□□□ -0.92
HOXA1-201ENST00000343060 APOL5Q9BWW9 433 aa9.31□□□□□ -0.92
HOXA1-201ENST00000343060 BBS2Q9BXC9 721 aa9.31□□□□□ -0.92
HOXA1-201ENST00000343060 ZNF717Q9BY31 904 aaPredicted RBP9.31□□□□□ -0.92
HOXA1-201ENST00000343060 CIPCQ9C0C6 399 aa9.31□□□□□ -0.92
HOXA1-201ENST00000343060 ARHGAP39Q9C0H5 1083 aa9.31□□□□□ -0.92
HOXA1-201ENST00000343060 PDGFDQ9GZP0 370 aaPredicted RBP9.31□□□□□ -0.92
HOXA1-201ENST00000343060 BPIFA1Q9NP55 256 aa9.31□□□□□ -0.92
HOXA1-201ENST00000343060 B3GNT2Q9NY97 397 aa9.31□□□□□ -0.92
HOXA1-201ENST00000343060 TSR3Q9UJK0 312 aaKnown RBP9.31□□□□□ -0.92
HOXA1-201ENST00000343060 CORO2BQ9UQ03 480 aa9.31□□□□□ -0.92
HOXA1-201ENST00000343060 PRELID1Q9Y255 219 aa9.31□□□□□ -0.92
HOXA1-201ENST00000343060 RAI2Q9Y5P3 530 aa9.31□□□□□ -0.92
HOXA1-201ENST00000343060 SCN8AQ9UQD0 1980 aa9.31□□□□□ -0.92
HOXA1-201ENST00000343060 A0A1W2PQ72 361 aa9.31□□□□□ -0.92
HOXA1-201ENST00000343060 C1orf226A1L170 272 aa9.31□□□□□ -0.92
HOXA1-201ENST00000343060 H3BM21 787 aa9.31□□□□□ -0.92
HOXA1-201ENST00000343060 IL1AP01583 271 aa9.31□□□□□ -0.92
HOXA1-201ENST00000343060 FAM157BP0CG42 384 aa9.31□□□□□ -0.92
HOXA1-201ENST00000343060 TACR2P21452 398 aa9.31□□□□□ -0.92
HOXA1-201ENST00000343060 CBLP22681 906 aa9.31□□□□□ -0.92
HOXA1-201ENST00000343060 PRKACBP22694 351 aa9.31□□□□□ -0.92
HOXA1-201ENST00000343060 PPIBP23284 216 aaKnown RBP9.31□□□□□ -0.92
HOXA1-201ENST00000343060 SELENOWP63302 87 aa9.31□□□□□ -0.92
HOXA1-201ENST00000343060 RUNX1T1Q06455 604 aa9.31□□□□□ -0.92
HOXA1-201ENST00000343060 GPR19Q15760 415 aa9.31□□□□□ -0.92
HOXA1-201ENST00000343060 TRIM60Q495X7 471 aa9.31□□□□□ -0.92
HOXA1-201ENST00000343060 PAN2Q504Q3 1202 aaKnown RBP9.31□□□□□ -0.92
HOXA1-201ENST00000343060 TMEM201Q5SNT2 666 aa9.31□□□□□ -0.92
HOXA1-201ENST00000343060 GPRC6AQ5T6X5 926 aa9.31□□□□□ -0.92
HOXA1-201ENST00000343060 MEDAGQ5VYS4 303 aa9.31□□□□□ -0.92
HOXA1-201ENST00000343060 SPRYD7Q5W111 196 aa9.31□□□□□ -0.92
HOXA1-201ENST00000343060 PTRHD1Q6GMV3 140 aaKnown RBP9.31□□□□□ -0.92
HOXA1-201ENST00000343060 LAMTOR1Q6IAA8 161 aa9.31□□□□□ -0.92
HOXA1-201ENST00000343060 DLK2Q6UY11 383 aa9.31□□□□□ -0.92
HOXA1-201ENST00000343060 LRRC70Q7Z2Q7 622 aa9.31□□□□□ -0.92
HOXA1-201ENST00000343060 RASAL3Q86YV0 1011 aa9.31□□□□□ -0.92
HOXA1-201ENST00000343060 SLC44A2Q8IWA5 706 aaPredicted RBP9.31□□□□□ -0.92
HOXA1-201ENST00000343060 LAS2Q8IYD9 372 aa9.31□□□□□ -0.92
HOXA1-201ENST00000343060 SIX5Q8N196 739 aa9.31□□□□□ -0.92
HOXA1-201ENST00000343060 L3MBTL4Q8NA19 623 aa9.31□□□□□ -0.92
HOXA1-201ENST00000343060 UTP15Q8TED0 518 aaKnown RBP9.31□□□□□ -0.92
HOXA1-201ENST00000343060 ADGRE3Q9BY15 652 aa9.31□□□□□ -0.92
HOXA1-201ENST00000343060 SLC32A1Q9H598 525 aa9.31□□□□□ -0.92
HOXA1-201ENST00000343060 TPT1P8Q9HAU6 139 aa9.31□□□□□ -0.92
HOXA1-201ENST00000343060 SLC6A14Q9UN76 642 aa9.31□□□□□ -0.92
HOXA1-201ENST00000343060 AUP1Q9Y679 476 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms