RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 ZNF195O14628 629 aa17.05■□□□□ 0.32
SDCBP2-201ENST00000339987 ZSCAN9O15535 394 aaPredicted RBP17.05■□□□□ 0.32
SDCBP2-201ENST00000339987 P2RX6O15547 441 aa17.05■□□□□ 0.32
SDCBP2-201ENST00000339987 JUNP05412 331 aaKnown RBP17.05■□□□□ 0.32
SDCBP2-201ENST00000339987 TROVE2P10155 538 aaKnown RBP eCLIP17.05■□□□□ 0.32
SDCBP2-201ENST00000339987 PTX3P26022 381 aaPredicted RBP17.05■□□□□ 0.32
SDCBP2-201ENST00000339987 TSPAN7P41732 249 aa17.05■□□□□ 0.32
SDCBP2-201ENST00000339987 EMP3P54852 163 aa17.05■□□□□ 0.32
SDCBP2-201ENST00000339987 HYAL2Q12891 473 aa17.05■□□□□ 0.32
SDCBP2-201ENST00000339987 EIF3IQ13347 325 aaKnown RBP17.05■□□□□ 0.32
SDCBP2-201ENST00000339987 CUL3Q13618 768 aa17.05■□□□□ 0.32
SDCBP2-201ENST00000339987 ADPRMQ3LIE5 342 aa17.05■□□□□ 0.32
SDCBP2-201ENST00000339987 WASHC2DQ5SRD0 308 aa17.05■□□□□ 0.32
SDCBP2-201ENST00000339987 SCIMPQ6UWF3 145 aa17.05■□□□□ 0.32
SDCBP2-201ENST00000339987 DDIASQ8IXT1 998 aa17.05■□□□□ 0.32
SDCBP2-201ENST00000339987 RNF175Q8N4F7 328 aa17.05■□□□□ 0.32
SDCBP2-201ENST00000339987 C19orf60Q96EN9 201 aa17.05■□□□□ 0.32
SDCBP2-201ENST00000339987 HBEGFQ99075 208 aa17.05■□□□□ 0.32
SDCBP2-201ENST00000339987 SIKE1Q9BRV8 207 aa17.05■□□□□ 0.32
SDCBP2-201ENST00000339987 TRIM55Q9BYV6 548 aa17.05■□□□□ 0.32
SDCBP2-201ENST00000339987 SLC6A16Q9GZN6 736 aa17.05■□□□□ 0.32
SDCBP2-201ENST00000339987 MEAF6Q9HAF1 191 aa17.05■□□□□ 0.32
SDCBP2-201ENST00000339987 NMRK1Q9NWW6 199 aa17.05■□□□□ 0.32
SDCBP2-201ENST00000339987 OCIAD1Q9NX40 245 aa17.05■□□□□ 0.32
SDCBP2-201ENST00000339987 SERTAD3Q9UJW9 196 aa17.05■□□□□ 0.32
SDCBP2-201ENST00000339987 CCL27Q9Y4X3 112 aa17.05■□□□□ 0.32
SDCBP2-201ENST00000339987 FITM1A5D6W6 292 aa17.04■□□□□ 0.32
SDCBP2-201ENST00000339987 LRIT2A6NDA9 550 aa17.04■□□□□ 0.32
SDCBP2-201ENST00000339987 RGS14O43566 566 aa17.04■□□□□ 0.32
SDCBP2-201ENST00000339987 OR2B3O76000 313 aa17.04■□□□□ 0.32
SDCBP2-201ENST00000339987 SEMA3DO95025 777 aa17.04■□□□□ 0.32
SDCBP2-201ENST00000339987 SERPIND1P05546 499 aa17.04■□□□□ 0.32
SDCBP2-201ENST00000339987 LINC00032P0C843 101 aa17.04■□□□□ 0.32
SDCBP2-201ENST00000339987 SEC24CP53992 1094 aa17.04■□□□□ 0.32
SDCBP2-201ENST00000339987 ITGA1P56199 1179 aa17.04■□□□□ 0.32
SDCBP2-201ENST00000339987 STXBP1P61764 594 aaKnown RBP17.04■□□□□ 0.32
SDCBP2-201ENST00000339987 MC2RQ01718 297 aa17.04■□□□□ 0.32
SDCBP2-201ENST00000339987 IL11RAQ14626 422 aa17.04■□□□□ 0.32
SDCBP2-201ENST00000339987 TMEM35AQ53FP2 167 aa17.04■□□□□ 0.32
SDCBP2-201ENST00000339987 DEPDC1Q5TB30 811 aa17.04■□□□□ 0.32
SDCBP2-201ENST00000339987 KHDRBS2Q5VWX1 349 aaKnown RBP17.04■□□□□ 0.32
SDCBP2-201ENST00000339987 CHSY3Q70JA7 882 aa17.04■□□□□ 0.32
SDCBP2-201ENST00000339987 MAVSQ7Z434 540 aa17.04■□□□□ 0.32
SDCBP2-201ENST00000339987 OR1L3Q8NH93 324 aa17.04■□□□□ 0.32
SDCBP2-201ENST00000339987 STON2Q8WXE9 905 aa17.04■□□□□ 0.32
SDCBP2-201ENST00000339987 OR6C1Q96RD1 312 aa17.04■□□□□ 0.32
SDCBP2-201ENST00000339987 NUF2Q9BZD4 464 aa17.04■□□□□ 0.32
SDCBP2-201ENST00000339987 NSRP1Q9H0G5 558 aaKnown RBP17.04■□□□□ 0.32
SDCBP2-201ENST00000339987 FBXO8Q9NRD0 319 aa17.04■□□□□ 0.32
SDCBP2-201ENST00000339987 RIC8BQ9NVN3 520 aa17.04■□□□□ 0.32
SDCBP2-201ENST00000339987 VPS29Q9UBQ0 182 aa17.04■□□□□ 0.32
SDCBP2-201ENST00000339987 RARRES3Q9UL19 164 aa17.04■□□□□ 0.32
SDCBP2-201ENST00000339987 LOXL2Q9Y4K0 774 aa17.04■□□□□ 0.32
SDCBP2-201ENST00000339987 PTGDR2Q9Y5Y4 395 aa17.04■□□□□ 0.32
SDCBP2-201ENST00000339987 DCDC2BA2VCK2 349 aa17.04■□□□□ 0.32
SDCBP2-201ENST00000339987 URADA6NGE7 173 aa17.04■□□□□ 0.32
SDCBP2-201ENST00000339987 RSL1D1O76021 490 aaKnown RBP17.04■□□□□ 0.32
SDCBP2-201ENST00000339987 ETHE1O95571 254 aa17.04■□□□□ 0.32
SDCBP2-201ENST00000339987 TGFB1P01137 390 aa17.04■□□□□ 0.32
SDCBP2-201ENST00000339987 EIF2S1P05198 315 aaKnown RBP17.04■□□□□ 0.32
SDCBP2-201ENST00000339987 CTSBP07858 339 aa17.04■□□□□ 0.32
SDCBP2-201ENST00000339987 FGF5P12034 268 aa17.04■□□□□ 0.32
SDCBP2-201ENST00000339987 DRD4P21917 467 aa17.04■□□□□ 0.32
SDCBP2-201ENST00000339987 PRPH2P23942 346 aa17.04■□□□□ 0.32
SDCBP2-201ENST00000339987 HNRNPH1P31943 449 aaKnown RBP17.04■□□□□ 0.32
SDCBP2-201ENST00000339987 ARFIP1P53367 373 aa17.04■□□□□ 0.32
SDCBP2-201ENST00000339987 GRM7Q14831 915 aa17.04■□□□□ 0.32
SDCBP2-201ENST00000339987 HKDC1Q2TB90 917 aa17.04■□□□□ 0.32
SDCBP2-201ENST00000339987 TOR1AIP1Q5JTV8 583 aa17.04■□□□□ 0.32
SDCBP2-201ENST00000339987 CGB2Q6NT52 195 aa17.04■□□□□ 0.32
SDCBP2-201ENST00000339987 TLDC1Q6P9B6 456 aa17.04■□□□□ 0.32
SDCBP2-201ENST00000339987 Q6ZSR9 355 aa17.04■□□□□ 0.32
SDCBP2-201ENST00000339987 RAB11FIP2Q7L804 512 aa17.04■□□□□ 0.32
SDCBP2-201ENST00000339987 GPR135Q8IZ08 494 aa17.04■□□□□ 0.32
SDCBP2-201ENST00000339987 GALNT15Q8N3T1 639 aa17.04■□□□□ 0.32
SDCBP2-201ENST00000339987 ARHGEF39Q8N4T4 335 aa17.04■□□□□ 0.32
SDCBP2-201ENST00000339987 C3orf30Q96M34 536 aa17.04■□□□□ 0.32
SDCBP2-201ENST00000339987 CFAP54Q96N23 3096 aa17.04■□□□□ 0.32
SDCBP2-201ENST00000339987 CENPKQ9BS16 269 aa17.04■□□□□ 0.32
SDCBP2-201ENST00000339987 AICDAQ9GZX7 198 aa17.04■□□□□ 0.32
SDCBP2-201ENST00000339987 SPRTNQ9H040 489 aaPredicted RBP17.04■□□□□ 0.32
SDCBP2-201ENST00000339987 EPN3Q9H201 632 aa17.04■□□□□ 0.32
SDCBP2-201ENST00000339987 OR51B5Q9H339 312 aa17.04■□□□□ 0.32
SDCBP2-201ENST00000339987 PRM3Q9NNZ6 103 aa17.04■□□□□ 0.32
SDCBP2-201ENST00000339987 SLC12A4Q9UP95 1085 aa17.04■□□□□ 0.32
SDCBP2-201ENST00000339987 RUVBL1Q9Y265 456 aaKnown RBP17.04■□□□□ 0.32
SDCBP2-201ENST00000339987 SDHDO14521 159 aa17.03■□□□□ 0.32
SDCBP2-201ENST00000339987 VPS4BO75351 444 aa17.03■□□□□ 0.32
SDCBP2-201ENST00000339987 STATHP02808 62 aa17.03■□□□□ 0.32
SDCBP2-201ENST00000339987 CCL4P13236 92 aa17.03■□□□□ 0.32
SDCBP2-201ENST00000339987 GCGRP47871 477 aa17.03■□□□□ 0.32
SDCBP2-201ENST00000339987 HMGCS1Q01581 520 aa17.03■□□□□ 0.32
SDCBP2-201ENST00000339987 FOXM1Q08050 763 aa17.03■□□□□ 0.32
SDCBP2-201ENST00000339987 IMPG1Q17R60 797 aa17.03■□□□□ 0.32
SDCBP2-201ENST00000339987 YOD1Q5VVQ6 348 aaPredicted RBP17.03■□□□□ 0.32
SDCBP2-201ENST00000339987 GARNL3Q5VVW2 1013 aa17.03■□□□□ 0.32
SDCBP2-201ENST00000339987 TMEM214Q6NUQ4 689 aaKnown RBP17.03■□□□□ 0.32
SDCBP2-201ENST00000339987 EPGNQ6UW88 154 aa17.03■□□□□ 0.32
SDCBP2-201ENST00000339987 TMPRSS7Q7RTY8 843 aa17.03■□□□□ 0.32
SDCBP2-201ENST00000339987 TTC29Q8NA56 475 aaPredicted RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms