RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 RHBGQ9H310 441 aa21.48■■□□□ 1.03
PDLIM2-203ENST00000339162 DUSP12Q9UNI6 340 aa21.48■■□□□ 1.03
PDLIM2-203ENST00000339162 HEATR5BQ9P2D3 2071 aa21.48■■□□□ 1.03
PDLIM2-203ENST00000339162 GSTA4O15217 222 aa21.48■■□□□ 1.03
PDLIM2-203ENST00000339162 PCSK2P16519 638 aa21.48■■□□□ 1.03
PDLIM2-203ENST00000339162 IL10P22301 178 aa21.48■■□□□ 1.03
PDLIM2-203ENST00000339162 C21orf58P58505 322 aa21.48■■□□□ 1.03
PDLIM2-203ENST00000339162 C2orf80Q0P641 193 aa21.48■■□□□ 1.03
PDLIM2-203ENST00000339162 KHDRBS2Q5VWX1 349 aaKnown RBP21.48■■□□□ 1.03
PDLIM2-203ENST00000339162 KIAA0895LQ68EN5 471 aa21.48■■□□□ 1.03
PDLIM2-203ENST00000339162 DEFB119Q8N690 84 aa21.48■■□□□ 1.03
PDLIM2-203ENST00000339162 DNAJB8Q8NHS0 232 aa21.48■■□□□ 1.03
PDLIM2-203ENST00000339162 FAM120BQ96EK7 910 aaKnown RBP21.48■■□□□ 1.03
PDLIM2-203ENST00000339162 MACROD1Q9BQ69 325 aa21.48■■□□□ 1.03
PDLIM2-203ENST00000339162 FAM120CQ9NX05 1096 aaKnown RBP21.48■■□□□ 1.03
PDLIM2-203ENST00000339162 TSC22D4Q9Y3Q8 395 aa21.48■■□□□ 1.03
PDLIM2-203ENST00000339162 COLEC10Q9Y6Z7 277 aa21.48■■□□□ 1.03
PDLIM2-203ENST00000339162 KRBA1A5PL33 1030 aa21.47■■□□□ 1.03
PDLIM2-203ENST00000339162 DEPDC1Q5TB30 811 aa21.47■■□□□ 1.03
PDLIM2-203ENST00000339162 FAM180BQ6P0A1 224 aa21.47■■□□□ 1.03
PDLIM2-203ENST00000339162 NRROSQ86YC3 692 aa21.47■■□□□ 1.03
PDLIM2-203ENST00000339162 TICAM1Q8IUC6 712 aa21.47■■□□□ 1.03
PDLIM2-203ENST00000339162 ADCY4Q8NFM4 1077 aa21.47■■□□□ 1.03
PDLIM2-203ENST00000339162 CIB1Q99828 191 aa21.47■■□□□ 1.03
PDLIM2-203ENST00000339162 CENPKQ9BS16 269 aa21.47■■□□□ 1.03
PDLIM2-203ENST00000339162 RAB11FIP5Q9BXF6 653 aa21.47■■□□□ 1.03
PDLIM2-203ENST00000339162 MS4A8Q9BY19 250 aa21.47■■□□□ 1.03
PDLIM2-203ENST00000339162 SLC6A20Q9NP91 592 aa21.47■■□□□ 1.03
PDLIM2-203ENST00000339162 MRPS30Q9NP92 439 aaKnown RBP21.47■■□□□ 1.03
PDLIM2-203ENST00000339162 WSB2Q9NYS7 404 aaPredicted RBP21.47■■□□□ 1.03
PDLIM2-203ENST00000339162 ELOVL7A1L3X0 281 aa21.47■■□□□ 1.03
PDLIM2-203ENST00000339162 PRAMEF26H0Y7S4 382 aa21.47■■□□□ 1.03
PDLIM2-203ENST00000339162 ABCB1P08183 1280 aaPredicted RBP21.47■■□□□ 1.03
PDLIM2-203ENST00000339162 TPP2P29144 1249 aaPredicted RBP21.47■■□□□ 1.03
PDLIM2-203ENST00000339162 YPEL5P62699 121 aa21.47■■□□□ 1.03
PDLIM2-203ENST00000339162 MSANTD1Q6ZTZ1 278 aa21.47■■□□□ 1.03
PDLIM2-203ENST00000339162 ERMP1Q7Z2K6 904 aa21.47■■□□□ 1.03
PDLIM2-203ENST00000339162 TMEM126BQ8IUX1 230 aa21.47■■□□□ 1.03
PDLIM2-203ENST00000339162 SFTPA2Q8IWL1 248 aa21.47■■□□□ 1.03
PDLIM2-203ENST00000339162 LCN9Q8WX39 176 aa21.47■■□□□ 1.03
PDLIM2-203ENST00000339162 PATE1Q8WXA2 126 aa21.47■■□□□ 1.03
PDLIM2-203ENST00000339162 REEP4Q9H6H4 257 aa21.47■■□□□ 1.03
PDLIM2-203ENST00000339162 SIRT5Q9NXA8 310 aa21.47■■□□□ 1.03
PDLIM2-203ENST00000339162 SPASTQ9UBP0 616 aa21.47■■□□□ 1.03
PDLIM2-203ENST00000339162 ANAPC2Q9UJX6 822 aa21.47■■□□□ 1.03
PDLIM2-203ENST00000339162 HS3ST3A1Q9Y663 406 aa21.47■■□□□ 1.03
PDLIM2-203ENST00000339162 COL6A3P12111 3177 aa21.46■■□□□ 1.03
PDLIM2-203ENST00000339162 A0A0G2JN53 185 aa21.46■■□□□ 1.03
PDLIM2-203ENST00000339162 A0A1W2PPC1 479 aa21.46■■□□□ 1.03
PDLIM2-203ENST00000339162 TNFRSF10CO14798 259 aa21.46■■□□□ 1.03
PDLIM2-203ENST00000339162 PPM1DO15297 605 aa21.46■■□□□ 1.03
PDLIM2-203ENST00000339162 IGLV3-19P01714 112 aa21.46■■□□□ 1.03
PDLIM2-203ENST00000339162 GPIP06744 558 aa21.46■■□□□ 1.03
PDLIM2-203ENST00000339162 CKMT2P17540 419 aa21.46■■□□□ 1.03
PDLIM2-203ENST00000339162 ENGP17813 658 aa21.46■■□□□ 1.03
PDLIM2-203ENST00000339162 SLC19A1P41440 591 aa21.46■■□□□ 1.03
PDLIM2-203ENST00000339162 TRPC1P48995 793 aa21.46■■□□□ 1.03
PDLIM2-203ENST00000339162 FZD5Q13467 585 aa21.46■■□□□ 1.03
PDLIM2-203ENST00000339162 NRF1Q16656 503 aa21.46■■□□□ 1.03
PDLIM2-203ENST00000339162 STARD8Q92502 1023 aa21.46■■□□□ 1.03
PDLIM2-203ENST00000339162 CIDECQ96AQ7 238 aaPredicted RBP21.46■■□□□ 1.03
PDLIM2-203ENST00000339162 PRPF18Q99633 342 aaKnown RBP21.46■■□□□ 1.03
PDLIM2-203ENST00000339162 ZNF717Q9BY31 904 aaPredicted RBP21.46■■□□□ 1.03
PDLIM2-203ENST00000339162 COQ10BQ9H8M1 238 aa21.46■■□□□ 1.03
PDLIM2-203ENST00000339162 KLF15Q9UIH9 416 aa21.46■■□□□ 1.03
PDLIM2-203ENST00000339162 HEBP2Q9Y5Z4 205 aa21.46■■□□□ 1.03
PDLIM2-203ENST00000339162 ISM1B1AKI9 464 aa21.45■■□□□ 1.03
PDLIM2-203ENST00000339162 C10orf142B7Z368 130 aa21.45■■□□□ 1.03
PDLIM2-203ENST00000339162 CLIC1O00299 241 aa21.45■■□□□ 1.03
PDLIM2-203ENST00000339162 PRICKLE3O43900 615 aaPredicted RBP21.45■■□□□ 1.03
PDLIM2-203ENST00000339162 ANXA6P08133 673 aa21.45■■□□□ 1.03
PDLIM2-203ENST00000339162 IL3P08700 152 aa21.45■■□□□ 1.03
PDLIM2-203ENST00000339162 GZMMP51124 257 aa21.45■■□□□ 1.03
PDLIM2-203ENST00000339162 PRSS53Q2L4Q9 553 aa21.45■■□□□ 1.03
PDLIM2-203ENST00000339162 CCNYL2Q5T2Q4 361 aa21.45■■□□□ 1.03
PDLIM2-203ENST00000339162 ABI3BPQ7Z7G0 1075 aa21.45■■□□□ 1.03
PDLIM2-203ENST00000339162 AMIGO1Q86WK6 493 aa21.45■■□□□ 1.03
PDLIM2-203ENST00000339162 FAM86B1Q8N7N1 296 aa21.45■■□□□ 1.03
PDLIM2-203ENST00000339162 TRPV3Q8NET8 790 aa21.45■■□□□ 1.03
PDLIM2-203ENST00000339162 OR2L3Q8NG85 312 aa21.45■■□□□ 1.03
PDLIM2-203ENST00000339162 COQ8BQ96D53 544 aa21.45■■□□□ 1.03
PDLIM2-203ENST00000339162 CXorf40BQ96DE9 158 aa21.45■■□□□ 1.03
PDLIM2-203ENST00000339162 RNF145Q96MT1 663 aa21.45■■□□□ 1.03
PDLIM2-203ENST00000339162 DPH7Q9BTV6 452 aa21.45■■□□□ 1.03
PDLIM2-203ENST00000339162 KIR3DX1Q9H7L2 352 aa21.45■■□□□ 1.03
PDLIM2-203ENST00000339162 SNRNP200O75643 2136 aaKnown RBP21.45■■□□□ 1.02
PDLIM2-203ENST00000339162 TXNDC9O14530 226 aa21.45■■□□□ 1.02
PDLIM2-203ENST00000339162 HNRNPRO43390 633 aaKnown RBP21.45■■□□□ 1.02
PDLIM2-203ENST00000339162 GMNNO75496 209 aa21.45■■□□□ 1.02
PDLIM2-203ENST00000339162 CELA2BP08218 269 aaPredicted RBP21.45■■□□□ 1.02
PDLIM2-203ENST00000339162 FURINP09958 794 aa21.45■■□□□ 1.02
PDLIM2-203ENST00000339162 FOSL2P15408 326 aa21.45■■□□□ 1.02
PDLIM2-203ENST00000339162 CD6P30203 668 aa21.45■■□□□ 1.02
PDLIM2-203ENST00000339162 LRRC32Q14392 662 aa21.45■■□□□ 1.02
PDLIM2-203ENST00000339162 MICU2Q8IYU8 434 aa21.45■■□□□ 1.02
PDLIM2-203ENST00000339162 ADGRE2Q9UHX3 823 aa21.45■■□□□ 1.02
PDLIM2-203ENST00000339162 CXCR6O00574 342 aa21.44■■□□□ 1.02
PDLIM2-203ENST00000339162 CAPNS1P04632 268 aa21.44■■□□□ 1.02
PDLIM2-203ENST00000339162 RABIFP47224 123 aa21.44■■□□□ 1.02
PDLIM2-203ENST00000339162 POLE2P56282 527 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms