RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 PTGS2P35354 604 aa10.79□□□□□ -0.68
CSMD2-202ENST00000338325 CYB561P49447 251 aa10.79□□□□□ -0.68
CSMD2-202ENST00000338325 ART1P52961 327 aa10.79□□□□□ -0.68
CSMD2-202ENST00000338325 TBPL1P62380 186 aa10.79□□□□□ -0.68
CSMD2-202ENST00000338325 CUL1Q13616 776 aa10.79□□□□□ -0.68
CSMD2-202ENST00000338325 RPS6KA1Q15418 735 aa10.79□□□□□ -0.68
CSMD2-202ENST00000338325 SKOR2Q2VWA4 1001 aaPredicted RBP10.79□□□□□ -0.68
CSMD2-202ENST00000338325 C4orf22Q6V702 233 aa10.79□□□□□ -0.68
CSMD2-202ENST00000338325 ASPGQ86U10 573 aa10.79□□□□□ -0.68
CSMD2-202ENST00000338325 CD163Q86VB7 1156 aa10.79□□□□□ -0.68
CSMD2-202ENST00000338325 TXLNBQ8N3L3 684 aa10.79□□□□□ -0.68
CSMD2-202ENST00000338325 KIF2BQ8N4N8 673 aa10.79□□□□□ -0.68
CSMD2-202ENST00000338325 KCT2Q8NC54 265 aa10.79□□□□□ -0.68
CSMD2-202ENST00000338325 ASB5Q8WWX0 329 aa10.79□□□□□ -0.68
CSMD2-202ENST00000338325 TMEM125Q96AQ2 219 aa10.79□□□□□ -0.68
CSMD2-202ENST00000338325 PCBD2Q9H0N5 130 aa10.79□□□□□ -0.68
CSMD2-202ENST00000338325 TRIM45Q9H8W5 580 aaPredicted RBP10.79□□□□□ -0.68
CSMD2-202ENST00000338325 KLHL42Q9P2K6 505 aa10.79□□□□□ -0.68
CSMD2-202ENST00000338325 NAALAD2Q9Y3Q0 740 aa10.79□□□□□ -0.68
CSMD2-202ENST00000338325 SLC22A7Q9Y694 548 aa10.79□□□□□ -0.68
CSMD2-202ENST00000338325 CAPN6Q9Y6Q1 641 aa10.79□□□□□ -0.68
CSMD2-202ENST00000338325 INTS1Q8N201 2190 aaKnown RBP10.78□□□□□ -0.68
CSMD2-202ENST00000338325 FEZF1A0PJY2 475 aa10.78□□□□□ -0.68
CSMD2-202ENST00000338325 ZNF860A6NHJ4 632 aa10.78□□□□□ -0.68
CSMD2-202ENST00000338325 TPOP07202 933 aa10.78□□□□□ -0.68
CSMD2-202ENST00000338325 FHP07954 510 aa10.78□□□□□ -0.68
CSMD2-202ENST00000338325 SLC35G6P0C7Q6 338 aa10.78□□□□□ -0.68
CSMD2-202ENST00000338325 COILP38432 576 aaPredicted RBP10.78□□□□□ -0.68
CSMD2-202ENST00000338325 ITGA8P53708 1063 aa10.78□□□□□ -0.68
CSMD2-202ENST00000338325 MPP1Q00013 466 aa10.78□□□□□ -0.68
CSMD2-202ENST00000338325 TMEM211Q6ICI0 200 aa10.78□□□□□ -0.68
CSMD2-202ENST00000338325 NEPROQ6NW34 567 aa10.78□□□□□ -0.68
CSMD2-202ENST00000338325 CEP128Q6ZU80 1094 aa10.78□□□□□ -0.68
CSMD2-202ENST00000338325 UBE2R2Q712K3 238 aaPredicted RBP10.78□□□□□ -0.68
CSMD2-202ENST00000338325 SLC26A11Q86WA9 606 aa10.78□□□□□ -0.68
CSMD2-202ENST00000338325 ZNF227Q86WZ6 799 aa10.78□□□□□ -0.68
CSMD2-202ENST00000338325 MARVELD2Q8N4S9 558 aa10.78□□□□□ -0.68
CSMD2-202ENST00000338325 SLC13A3Q8WWT9 602 aa10.78□□□□□ -0.68
CSMD2-202ENST00000338325 KCNJ9Q92806 393 aa10.78□□□□□ -0.68
CSMD2-202ENST00000338325 CCDC138Q96M89 665 aa10.78□□□□□ -0.68
CSMD2-202ENST00000338325 FAM129AQ9BZQ8 928 aa10.78□□□□□ -0.68
CSMD2-202ENST00000338325 NPDC1Q9NQX5 325 aaPredicted RBP10.78□□□□□ -0.68
CSMD2-202ENST00000338325 TNFRSF10DQ9UBN6 386 aa10.78□□□□□ -0.68
CSMD2-202ENST00000338325 SH2B3Q9UQQ2 575 aa10.78□□□□□ -0.68
CSMD2-202ENST00000338325 KLF13Q9Y2Y9 288 aaPredicted RBP10.78□□□□□ -0.68
CSMD2-202ENST00000338325 A0A1B0GTH9 108 aa10.77□□□□□ -0.69
CSMD2-202ENST00000338325 CTAGE9A4FU28 777 aa10.77□□□□□ -0.69
CSMD2-202ENST00000338325 LCMT2O60294 686 aaKnown RBP10.77□□□□□ -0.69
CSMD2-202ENST00000338325 TPSB2P20231 275 aa10.77□□□□□ -0.69
CSMD2-202ENST00000338325 JAK1P23458 1154 aa10.77□□□□□ -0.69
CSMD2-202ENST00000338325 CHRNB4P30926 498 aa10.77□□□□□ -0.69
CSMD2-202ENST00000338325 TRHRP34981 398 aaPredicted RBP10.77□□□□□ -0.69
CSMD2-202ENST00000338325 MEOX1P50221 254 aa10.77□□□□□ -0.69
CSMD2-202ENST00000338325 HLCSP50747 726 aa10.77□□□□□ -0.69
CSMD2-202ENST00000338325 MLF1P58340 268 aa10.77□□□□□ -0.69
CSMD2-202ENST00000338325 CDK16Q00536 496 aa10.77□□□□□ -0.69
CSMD2-202ENST00000338325 TFF3Q07654 80 aa10.77□□□□□ -0.69
CSMD2-202ENST00000338325 HERC3Q15034 1050 aa10.77□□□□□ -0.69
CSMD2-202ENST00000338325 TPSAB1Q15661 275 aa10.77□□□□□ -0.69
CSMD2-202ENST00000338325 CCNG2Q16589 344 aa10.77□□□□□ -0.69
CSMD2-202ENST00000338325 ARMC3Q5W041 872 aa10.77□□□□□ -0.69
CSMD2-202ENST00000338325 ZNF470Q6ECI4 717 aa10.77□□□□□ -0.69
CSMD2-202ENST00000338325 CAPN13Q6MZZ7 669 aaPredicted RBP10.77□□□□□ -0.69
CSMD2-202ENST00000338325 CYHR1Q6ZMK1 362 aa10.77□□□□□ -0.69
CSMD2-202ENST00000338325 C17orf64Q86WR6 236 aa10.77□□□□□ -0.69
CSMD2-202ENST00000338325 SPNS2Q8IVW8 549 aa10.77□□□□□ -0.69
CSMD2-202ENST00000338325 OR5T3Q8NGG3 340 aa10.77□□□□□ -0.69
CSMD2-202ENST00000338325 TBC1D20Q96BZ9 403 aa10.77□□□□□ -0.69
CSMD2-202ENST00000338325 TSGA10Q9BZW7 698 aa10.77□□□□□ -0.69
CSMD2-202ENST00000338325 CCDC68Q9H2F9 335 aa10.77□□□□□ -0.69
CSMD2-202ENST00000338325 MED16Q9Y2X0 877 aa10.77□□□□□ -0.69
CSMD2-202ENST00000338325 DHRS7Q9Y394 339 aa10.77□□□□□ -0.69
CSMD2-202ENST00000338325 NKX2-6A6NCS4 301 aa10.76□□□□□ -0.69
CSMD2-202ENST00000338325 SAGE2PA6NJ88 616 aa10.76□□□□□ -0.69
CSMD2-202ENST00000338325 FAM90A27PA6NNH2 459 aa10.76□□□□□ -0.69
CSMD2-202ENST00000338325 FCHO1O14526 889 aa10.76□□□□□ -0.69
CSMD2-202ENST00000338325 CDC40O60508 579 aaKnown RBP eCLIP10.76□□□□□ -0.69
CSMD2-202ENST00000338325 NADKO95544 446 aaPredicted RBP10.76□□□□□ -0.69
CSMD2-202ENST00000338325 F7P08709 466 aaPredicted RBP10.76□□□□□ -0.69
CSMD2-202ENST00000338325 TFEBP19484 476 aa10.76□□□□□ -0.69
CSMD2-202ENST00000338325 MSX1P28360 303 aa10.76□□□□□ -0.69
CSMD2-202ENST00000338325 GRK3P35626 688 aa10.76□□□□□ -0.69
CSMD2-202ENST00000338325 SIX1Q15475 284 aaPredicted RBP10.76□□□□□ -0.69
CSMD2-202ENST00000338325 ZNF549Q6P9A3 640 aa10.76□□□□□ -0.69
CSMD2-202ENST00000338325 DRICH1Q6PGQ1 229 aaPredicted RBP10.76□□□□□ -0.69
CSMD2-202ENST00000338325 GSTA5Q7RTV2 222 aa10.76□□□□□ -0.69
CSMD2-202ENST00000338325 PIWIL4Q7Z3Z4 852 aaKnown RBP10.76□□□□□ -0.69
CSMD2-202ENST00000338325 TMEM200AQ86VY9 491 aa10.76□□□□□ -0.69
CSMD2-202ENST00000338325 DMRTC2Q8IXT2 367 aaPredicted RBP10.76□□□□□ -0.69
CSMD2-202ENST00000338325 CPNE9Q8IYJ1 553 aa10.76□□□□□ -0.69
CSMD2-202ENST00000338325 CYP4X1Q8N118 509 aa10.76□□□□□ -0.69
CSMD2-202ENST00000338325 AFAP1L2Q8N4X5 818 aa10.76□□□□□ -0.69
CSMD2-202ENST00000338325 MFSD9Q8NBP5 474 aa10.76□□□□□ -0.69
CSMD2-202ENST00000338325 LILRB4Q8NHJ6 448 aa10.76□□□□□ -0.69
CSMD2-202ENST00000338325 CD200R1Q8TD46 325 aa10.76□□□□□ -0.69
CSMD2-202ENST00000338325 GPR21Q99679 349 aa10.76□□□□□ -0.69
CSMD2-202ENST00000338325 ZNF559Q9BR84 538 aa10.76□□□□□ -0.69
CSMD2-202ENST00000338325 TP63Q9H3D4 680 aaPredicted RBP10.76□□□□□ -0.69
CSMD2-202ENST00000338325 FBXO6Q9NRD1 293 aaPredicted RBP10.76□□□□□ -0.69
CSMD2-202ENST00000338325 RNF6Q9Y252 685 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms