RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 SGPP1Q9BX95 441 aa10.06□□□□□ -0.8
CAPN3-202ENST00000337571 CORO1CQ9ULV4 474 aaPredicted RBP10.06□□□□□ -0.8
CAPN3-202ENST00000337571 SNX12Q9UMY4 172 aa10.06□□□□□ -0.8
CAPN3-202ENST00000337571 SCN2AQ99250 2005 aa10.06□□□□□ -0.8
CAPN3-202ENST00000337571 URADA6NGE7 173 aa10.05□□□□□ -0.8
CAPN3-202ENST00000337571 PRSS44E7EML9 344 aa10.05□□□□□ -0.8
CAPN3-202ENST00000337571 CCL21O00585 134 aa10.05□□□□□ -0.8
CAPN3-202ENST00000337571 TTI1O43156 1089 aa10.05□□□□□ -0.8
CAPN3-202ENST00000337571 NDUFS4O43181 175 aa10.05□□□□□ -0.8
CAPN3-202ENST00000337571 HNRNPRO43390 633 aaKnown RBP10.05□□□□□ -0.8
CAPN3-202ENST00000337571 RDH16O75452 317 aa10.05□□□□□ -0.8
CAPN3-202ENST00000337571 GUCA1CO95843 209 aa10.05□□□□□ -0.8
CAPN3-202ENST00000337571 CD46P15529 392 aa10.05□□□□□ -0.8
CAPN3-202ENST00000337571 JAK1P23458 1154 aa10.05□□□□□ -0.8
CAPN3-202ENST00000337571 OC90Q02509 493 aaPredicted RBP10.05□□□□□ -0.8
CAPN3-202ENST00000337571 RGS1Q08116 209 aa10.05□□□□□ -0.8
CAPN3-202ENST00000337571 PWP1Q13610 501 aa10.05□□□□□ -0.8
CAPN3-202ENST00000337571 ABRAXAS2Q15018 415 aa10.05□□□□□ -0.8
CAPN3-202ENST00000337571 SFT2D3Q587I9 215 aa10.05□□□□□ -0.8
CAPN3-202ENST00000337571 ZNF766Q5HY98 468 aa10.05□□□□□ -0.8
CAPN3-202ENST00000337571 RBM20Q5T481 1227 aaKnown RBP10.05□□□□□ -0.8
CAPN3-202ENST00000337571 HECTD2Q5U5R9 776 aa10.05□□□□□ -0.8
CAPN3-202ENST00000337571 ZNF324BQ6AW86 544 aaPredicted RBP10.05□□□□□ -0.8
CAPN3-202ENST00000337571 FAM45BPQ6NSW5 357 aa10.05□□□□□ -0.8
CAPN3-202ENST00000337571 H3F3CQ6NXT2 135 aa10.05□□□□□ -0.8
CAPN3-202ENST00000337571 MTFR2Q6P444 385 aa10.05□□□□□ -0.8
CAPN3-202ENST00000337571 MBOAT1Q6ZNC8 495 aa10.05□□□□□ -0.8
CAPN3-202ENST00000337571 ABHD13Q7L211 337 aa10.05□□□□□ -0.8
CAPN3-202ENST00000337571 PRSS41Q7RTY9 318 aa10.05□□□□□ -0.8
CAPN3-202ENST00000337571 ZGRF1Q86YA3 2104 aa10.05□□□□□ -0.8
CAPN3-202ENST00000337571 SLC5A8Q8N695 610 aa10.05□□□□□ -0.8
CAPN3-202ENST00000337571 PLPP5Q8NEB5 264 aa10.05□□□□□ -0.8
CAPN3-202ENST00000337571 FAM45AQ8TCE6 357 aa10.05□□□□□ -0.8
CAPN3-202ENST00000337571 RELTQ969Z4 430 aa10.05□□□□□ -0.8
CAPN3-202ENST00000337571 TBC1D20Q96BZ9 403 aa10.05□□□□□ -0.8
CAPN3-202ENST00000337571 PYCR2Q96C36 320 aa10.05□□□□□ -0.8
CAPN3-202ENST00000337571 CFAP36Q96G28 342 aa10.05□□□□□ -0.8
CAPN3-202ENST00000337571 OR1F2PQ96R84 312 aa10.05□□□□□ -0.8
CAPN3-202ENST00000337571 PRR14Q9BWN1 585 aa10.05□□□□□ -0.8
CAPN3-202ENST00000337571 DDX47Q9H0S4 455 aaKnown RBP10.05□□□□□ -0.8
CAPN3-202ENST00000337571 GRPEL1Q9HAV7 217 aa10.05□□□□□ -0.8
CAPN3-202ENST00000337571 DYRK1BQ9Y463 629 aa10.05□□□□□ -0.8
CAPN3-202ENST00000337571 UNC79Q9P2D8 2635 aa10.05□□□□□ -0.8
CAPN3-202ENST00000337571 CACNA1DQ01668 2161 aa10.05□□□□□ -0.8
CAPN3-202ENST00000337571 CNTRLQ7Z7A1 2325 aa10.05□□□□□ -0.8
CAPN3-202ENST00000337571 ITPR2Q14571 2701 aa10.05□□□□□ -0.8
CAPN3-202ENST00000337571 TRBC2A0A5B9 178 aa10.04□□□□□ -0.8
CAPN3-202ENST00000337571 ARHGAP10A1A4S6 786 aa10.04□□□□□ -0.8
CAPN3-202ENST00000337571 OR2W5A6NFC9 320 aa10.04□□□□□ -0.8
CAPN3-202ENST00000337571 MAGEB17A8MXT2 336 aa10.04□□□□□ -0.8
CAPN3-202ENST00000337571 PSMD12O00232 456 aaPredicted RBP10.04□□□□□ -0.8
CAPN3-202ENST00000337571 H2AFYO75367 372 aaKnown RBP10.04□□□□□ -0.8
CAPN3-202ENST00000337571 BANF1O75531 89 aa10.04□□□□□ -0.8
CAPN3-202ENST00000337571 CDC123O75794 336 aaPredicted RBP10.04□□□□□ -0.8
CAPN3-202ENST00000337571 ENO2P09104 434 aaPredicted RBP10.04□□□□□ -0.8
CAPN3-202ENST00000337571 TCP1P17987 556 aaKnown RBP10.04□□□□□ -0.8
CAPN3-202ENST00000337571 SAT1P21673 171 aa10.04□□□□□ -0.8
CAPN3-202ENST00000337571 GABRB3P28472 473 aa10.04□□□□□ -0.8
CAPN3-202ENST00000337571 EEF1DP29692 281 aaKnown RBP10.04□□□□□ -0.8
CAPN3-202ENST00000337571 ELK3P41970 407 aa10.04□□□□□ -0.8
CAPN3-202ENST00000337571 TDGF1P3P51864 188 aa10.04□□□□□ -0.8
CAPN3-202ENST00000337571 OR4D2P58180 307 aa10.04□□□□□ -0.8
CAPN3-202ENST00000337571 TIAL1Q01085 375 aaKnown RBP eCLIP10.04□□□□□ -0.8
CAPN3-202ENST00000337571 MEF2AQ02078 507 aaPredicted RBP10.04□□□□□ -0.8
CAPN3-202ENST00000337571 MORF4L2Q15014 288 aa10.04□□□□□ -0.8
CAPN3-202ENST00000337571 PHKG1Q16816 387 aa10.04□□□□□ -0.8
CAPN3-202ENST00000337571 DEFB134Q4QY38 66 aa10.04□□□□□ -0.8
CAPN3-202ENST00000337571 MSS51Q4VC12 460 aa10.04□□□□□ -0.8
CAPN3-202ENST00000337571 HP1BP3Q5SSJ5 553 aaPredicted RBP10.04□□□□□ -0.8
CAPN3-202ENST00000337571 TEDDM1Q5T9Z0 273 aa10.04□□□□□ -0.8
CAPN3-202ENST00000337571 FCRLBQ6BAA4 426 aa10.04□□□□□ -0.8
CAPN3-202ENST00000337571 PAPD4Q6PIY7 484 aaKnown RBP10.04□□□□□ -0.8
CAPN3-202ENST00000337571 SYDE1Q6ZW31 735 aaPredicted RBP10.04□□□□□ -0.8
CAPN3-202ENST00000337571 GALNT7Q86SF2 657 aa10.04□□□□□ -0.8
CAPN3-202ENST00000337571 PDSS2Q86YH6 399 aa10.04□□□□□ -0.8
CAPN3-202ENST00000337571 CNTN4Q8IWV2 1026 aa10.04□□□□□ -0.8
CAPN3-202ENST00000337571 CYP4X1Q8N118 509 aa10.04□□□□□ -0.8
CAPN3-202ENST00000337571 BEST3Q8N1M1 668 aa10.04□□□□□ -0.8
CAPN3-202ENST00000337571 FAM98AQ8NCA5 519 aaKnown RBP10.04□□□□□ -0.8
CAPN3-202ENST00000337571 ABHD11Q8NFV4 315 aa10.04□□□□□ -0.8
CAPN3-202ENST00000337571 OR4K1Q8NGD4 311 aa10.04□□□□□ -0.8
CAPN3-202ENST00000337571 SLC5A11Q8WWX8 675 aa10.04□□□□□ -0.8
CAPN3-202ENST00000337571 LRRC39Q96DD0 335 aa10.04□□□□□ -0.8
CAPN3-202ENST00000337571 RUNDC3BQ96NL0 473 aa10.04□□□□□ -0.8
CAPN3-202ENST00000337571 MMP25Q9NPA2 562 aa10.04□□□□□ -0.8
CAPN3-202ENST00000337571 SH2B3Q9UQQ2 575 aa10.04□□□□□ -0.8
CAPN3-202ENST00000337571 ENTPD4Q9Y227 616 aa10.04□□□□□ -0.8
CAPN3-202ENST00000337571 PCDHGB6Q9Y5F9 930 aa10.04□□□□□ -0.8
CAPN3-202ENST00000337571 LRBAP50851 2863 aa10.03□□□□□ -0.8
CAPN3-202ENST00000337571 ZNF860A6NHJ4 632 aa10.03□□□□□ -0.8
CAPN3-202ENST00000337571 FAM227AF5H4B4 570 aa10.03□□□□□ -0.8
CAPN3-202ENST00000337571 NDC80O14777 642 aa10.03□□□□□ -0.8
CAPN3-202ENST00000337571 CHST10O43529 356 aa10.03□□□□□ -0.8
CAPN3-202ENST00000337571 PRMT3O60678 531 aa10.03□□□□□ -0.8
CAPN3-202ENST00000337571 GALR3O60755 368 aaPredicted RBP10.03□□□□□ -0.8
CAPN3-202ENST00000337571 B4GALT2O60909 372 aa10.03□□□□□ -0.8
CAPN3-202ENST00000337571 FHP07954 510 aa10.03□□□□□ -0.8
CAPN3-202ENST00000337571 ESRRAP11474 423 aaPredicted RBP10.03□□□□□ -0.8
CAPN3-202ENST00000337571 ALOX12P18054 663 aa10.03□□□□□ -0.8
CAPN3-202ENST00000337571 MST1P26927 711 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms