RNA–Protein interactions for RNA: ENST00000336294.9

TMEM39B-201, Transcript of transmembrane protein 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39B, Length 1,813 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-201ENST00000336294 SYNPOQ8N3V7 929 aa16.02■□□□□ 0.16
TMEM39B-201ENST00000336294 PJA1Q8NG27 643 aa16.02■□□□□ 0.16
TMEM39B-201ENST00000336294 OR5K2Q8NHB8 316 aa16.02■□□□□ 0.16
TMEM39B-201ENST00000336294 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.02■□□□□ 0.16
TMEM39B-201ENST00000336294 TBC1D20Q96BZ9 403 aa16.02■□□□□ 0.16
TMEM39B-201ENST00000336294 CNDP2Q96KP4 475 aaKnown RBP16.02■□□□□ 0.16
TMEM39B-201ENST00000336294 TEX101Q9BY14 249 aa16.02■□□□□ 0.16
TMEM39B-201ENST00000336294 TOR3AQ9H497 397 aa16.02■□□□□ 0.16
TMEM39B-201ENST00000336294 SMURF2Q9HAU4 748 aa16.02■□□□□ 0.16
TMEM39B-201ENST00000336294 MYNNQ9NPC7 610 aa16.02■□□□□ 0.16
TMEM39B-201ENST00000336294 FZD4Q9ULV1 537 aa16.02■□□□□ 0.16
TMEM39B-201ENST00000336294 PTX3P26022 381 aaPredicted RBP16.01■□□□□ 0.15
TMEM39B-201ENST00000336294 HPCAP84074 193 aa16.01■□□□□ 0.15
TMEM39B-201ENST00000336294 SPIDRQ14159 915 aa16.01■□□□□ 0.15
TMEM39B-201ENST00000336294 PLCL1Q15111 1095 aa16.01■□□□□ 0.15
TMEM39B-201ENST00000336294 C17orf64Q86WR6 236 aa16.01■□□□□ 0.15
TMEM39B-201ENST00000336294 ZNF513Q8N8E2 541 aaPredicted RBP16.01■□□□□ 0.15
TMEM39B-201ENST00000336294 ZNF555Q8NEP9 628 aa16.01■□□□□ 0.15
TMEM39B-201ENST00000336294 WDR48Q8TAF3 677 aa16.01■□□□□ 0.15
TMEM39B-201ENST00000336294 ZFP90Q8TF47 636 aa16.01■□□□□ 0.15
TMEM39B-201ENST00000336294 C16orf78Q8WTQ4 265 aa16.01■□□□□ 0.15
TMEM39B-201ENST00000336294 MUS81Q96NY9 551 aa16.01■□□□□ 0.15
TMEM39B-201ENST00000336294 TRIT1Q9H3H1 467 aaKnown RBP16.01■□□□□ 0.15
TMEM39B-201ENST00000336294 WDR26Q9H7D7 661 aa16.01■□□□□ 0.15
TMEM39B-201ENST00000336294 PELI2Q9HAT8 420 aa16.01■□□□□ 0.15
TMEM39B-201ENST00000336294 SPATA7Q9P0W8 599 aa16.01■□□□□ 0.15
TMEM39B-201ENST00000336294 IFT80Q9P2H3 777 aaPredicted RBP16.01■□□□□ 0.15
TMEM39B-201ENST00000336294 EXO1Q9UQ84 846 aaKnown RBP16.01■□□□□ 0.15
TMEM39B-201ENST00000336294 PCM1Q15154 2024 aa16.01■□□□□ 0.15
TMEM39B-201ENST00000336294 CHD9Q3L8U1 2897 aa16.01■□□□□ 0.15
TMEM39B-201ENST00000336294 EPOPA6NHQ4 379 aa16.01■□□□□ 0.15
TMEM39B-201ENST00000336294 SAP18O00422 153 aaKnown RBP16.01■□□□□ 0.15
TMEM39B-201ENST00000336294 LINC01565O15544 149 aa16.01■□□□□ 0.15
TMEM39B-201ENST00000336294 ABCB1P08183 1280 aaPredicted RBP16.01■□□□□ 0.15
TMEM39B-201ENST00000336294 FURINP09958 794 aa16.01■□□□□ 0.15
TMEM39B-201ENST00000336294 SLC35G4P0C7Q5 338 aa16.01■□□□□ 0.15
TMEM39B-201ENST00000336294 PCSK6P29122 969 aa16.01■□□□□ 0.15
TMEM39B-201ENST00000336294 C2orf80Q0P641 193 aa16.01■□□□□ 0.15
TMEM39B-201ENST00000336294 GAB1Q13480 694 aa16.01■□□□□ 0.15
TMEM39B-201ENST00000336294 DCTN2Q13561 401 aaKnown RBP16.01■□□□□ 0.15
TMEM39B-201ENST00000336294 PDE7AQ13946 482 aa16.01■□□□□ 0.15
TMEM39B-201ENST00000336294 ZNF385BQ569K4 471 aa16.01■□□□□ 0.15
TMEM39B-201ENST00000336294 CBLL1Q75N03 491 aa16.01■□□□□ 0.15
TMEM39B-201ENST00000336294 EIF3MQ7L2H7 374 aaKnown RBP16.01■□□□□ 0.15
TMEM39B-201ENST00000336294 FAM129CQ86XR2 697 aa16.01■□□□□ 0.15
TMEM39B-201ENST00000336294 HS3ST5Q8IZT8 346 aa16.01■□□□□ 0.15
TMEM39B-201ENST00000336294 C2orf73Q8N5S3 287 aaPredicted RBP16.01■□□□□ 0.15
TMEM39B-201ENST00000336294 ZNF740Q8NDX6 193 aa16.01■□□□□ 0.15
TMEM39B-201ENST00000336294 OR10Q1Q8NGQ4 319 aa16.01■□□□□ 0.15
TMEM39B-201ENST00000336294 GOT1L1Q8NHS2 421 aaPredicted RBP16.01■□□□□ 0.15
TMEM39B-201ENST00000336294 PPCDCQ96CD2 204 aa16.01■□□□□ 0.15
TMEM39B-201ENST00000336294 MTERF3Q96E29 417 aa16.01■□□□□ 0.15
TMEM39B-201ENST00000336294 DPH2Q9BQC3 489 aaPredicted RBP16.01■□□□□ 0.15
TMEM39B-201ENST00000336294 TUBA1CQ9BQE3 449 aa16.01■□□□□ 0.15
TMEM39B-201ENST00000336294 ASPSCR1Q9BZE9 553 aa16.01■□□□□ 0.15
TMEM39B-201ENST00000336294 PCBD2Q9H0N5 130 aa16.01■□□□□ 0.15
TMEM39B-201ENST00000336294 CHST8Q9H2A9 424 aa16.01■□□□□ 0.15
TMEM39B-201ENST00000336294 IL1RAPQ9NPH3 570 aa16.01■□□□□ 0.15
TMEM39B-201ENST00000336294 MBNL1Q9NR56 388 aaKnown RBP16.01■□□□□ 0.15
TMEM39B-201ENST00000336294 TM7SF3Q9NS93 570 aa16.01■□□□□ 0.15
TMEM39B-201ENST00000336294 AP1M2Q9Y6Q5 423 aa16.01■□□□□ 0.15
TMEM39B-201ENST00000336294 CDH23Q9H251 3354 aa16■□□□□ 0.15
TMEM39B-201ENST00000336294 A0A1W2PP55 124 aa16■□□□□ 0.15
TMEM39B-201ENST00000336294 NOBOXO60393 691 aa16■□□□□ 0.15
TMEM39B-201ENST00000336294 SEMG1P04279 462 aa16■□□□□ 0.15
TMEM39B-201ENST00000336294 CDK4P11802 303 aa16■□□□□ 0.15
TMEM39B-201ENST00000336294 CXCR2P25025 360 aa16■□□□□ 0.15
TMEM39B-201ENST00000336294 IRF4Q15306 451 aa16■□□□□ 0.15
TMEM39B-201ENST00000336294 RGNQ15493 299 aa16■□□□□ 0.15
TMEM39B-201ENST00000336294 RFX4Q33E94 735 aa16■□□□□ 0.15
TMEM39B-201ENST00000336294 ATAT1Q5SQI0 421 aa16■□□□□ 0.15
TMEM39B-201ENST00000336294 ZNF776Q68DI1 518 aaPredicted RBP16■□□□□ 0.15
TMEM39B-201ENST00000336294 FAM71E1Q6IPT2 247 aa16■□□□□ 0.15
TMEM39B-201ENST00000336294 SHQ1Q6PI26 577 aaKnown RBP16■□□□□ 0.15
TMEM39B-201ENST00000336294 PARM1Q6UWI2 310 aa16■□□□□ 0.15
TMEM39B-201ENST00000336294 IKBIPQ70UQ0 350 aa16■□□□□ 0.15
TMEM39B-201ENST00000336294 TMEM179BQ7Z7N9 219 aa16■□□□□ 0.15
TMEM39B-201ENST00000336294 C8orf59Q8N0T1 100 aaPredicted RBP16■□□□□ 0.15
TMEM39B-201ENST00000336294 TMIGD2Q96BF3 282 aa16■□□□□ 0.15
TMEM39B-201ENST00000336294 MRPL38Q96DV4 380 aaKnown RBP16■□□□□ 0.15
TMEM39B-201ENST00000336294 MBOAT4Q96T53 435 aa16■□□□□ 0.15
TMEM39B-201ENST00000336294 TRMT61BQ9BVS5 477 aaKnown RBP16■□□□□ 0.15
TMEM39B-201ENST00000336294 ING2Q9H160 280 aa16■□□□□ 0.15
TMEM39B-201ENST00000336294 TM9SF3Q9HD45 589 aa16■□□□□ 0.15
TMEM39B-201ENST00000336294 PHPT1Q9NRX4 125 aaPredicted RBP16■□□□□ 0.15
TMEM39B-201ENST00000336294 DDX18Q9NVP1 670 aaKnown RBP16■□□□□ 0.15
TMEM39B-201ENST00000336294 FAM118AQ9NWS6 357 aa16■□□□□ 0.15
TMEM39B-201ENST00000336294 AHSPQ9NZD4 102 aa16■□□□□ 0.15
TMEM39B-201ENST00000336294 TMEM9Q9P0T7 183 aa16■□□□□ 0.15
TMEM39B-201ENST00000336294 SERGEFQ9UGK8 458 aa16■□□□□ 0.15
TMEM39B-201ENST00000336294 C3orf18Q9UK00 162 aa16■□□□□ 0.15
TMEM39B-201ENST00000336294 BAG5Q9UL15 447 aa16■□□□□ 0.15
TMEM39B-201ENST00000336294 ACSL5Q9ULC5 683 aa16■□□□□ 0.15
TMEM39B-201ENST00000336294 ORC6Q9Y5N6 252 aa16■□□□□ 0.15
TMEM39B-201ENST00000336294 A0A1B0GVG6 124 aa15.99■□□□□ 0.15
TMEM39B-201ENST00000336294 HS6ST1O60243 411 aa15.99■□□□□ 0.15
TMEM39B-201ENST00000336294 GBAP04062 536 aa15.99■□□□□ 0.15
TMEM39B-201ENST00000336294 FABP3P05413 133 aa15.99■□□□□ 0.15
TMEM39B-201ENST00000336294 KLK1P06870 262 aa15.99■□□□□ 0.15
TMEM39B-201ENST00000336294 TNFRSF4P43489 277 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms