RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 SMN1Q16637 294 aaKnown RBP17.03■□□□□ 0.32
LRCH3-201ENST00000334859 RAET1GQ6H3X3 334 aa17.03■□□□□ 0.32
LRCH3-201ENST00000334859 TRMT11Q7Z4G4 463 aaKnown RBP17.03■□□□□ 0.32
LRCH3-201ENST00000334859 C12orf40Q86WS4 652 aa17.03■□□□□ 0.32
LRCH3-201ENST00000334859 CPA6Q8N4T0 437 aa17.03■□□□□ 0.32
LRCH3-201ENST00000334859 PAWRQ96IZ0 340 aaKnown RBP17.03■□□□□ 0.32
LRCH3-201ENST00000334859 PLEKHA8Q96JA3 519 aa17.03■□□□□ 0.32
LRCH3-201ENST00000334859 RHNO1Q9BSD3 238 aa17.03■□□□□ 0.32
LRCH3-201ENST00000334859 ZCCHC2Q9C0B9 1178 aaKnown RBP17.03■□□□□ 0.32
LRCH3-201ENST00000334859 SAGE1Q9NXZ1 904 aa17.03■□□□□ 0.32
LRCH3-201ENST00000334859 HSPE1-MOB4S4R3N1 261 aa17.03■□□□□ 0.32
LRCH3-201ENST00000334859 PIPSLA2A3N6 862 aa17.03■□□□□ 0.32
LRCH3-201ENST00000334859 RNASET2O00584 256 aaKnown RBP17.03■□□□□ 0.32
LRCH3-201ENST00000334859 SLC9A3R1O14745 358 aaPredicted RBP17.03■□□□□ 0.32
LRCH3-201ENST00000334859 FAM20BO75063 409 aa17.03■□□□□ 0.32
LRCH3-201ENST00000334859 DNAJB5O75953 348 aa17.03■□□□□ 0.32
LRCH3-201ENST00000334859 TGFB1P01137 390 aa17.03■□□□□ 0.32
LRCH3-201ENST00000334859 OPN1SWP03999 348 aa17.03■□□□□ 0.32
LRCH3-201ENST00000334859 SRPRAP08240 638 aaKnown RBP17.03■□□□□ 0.32
LRCH3-201ENST00000334859 SLC35A2P78381 396 aa17.03■□□□□ 0.32
LRCH3-201ENST00000334859 KCNJ10P78508 379 aa17.03■□□□□ 0.32
LRCH3-201ENST00000334859 LAIR1Q6GTX8 287 aa17.03■□□□□ 0.32
LRCH3-201ENST00000334859 PIWIL3Q7Z3Z3 882 aaKnown RBP17.03■□□□□ 0.32
LRCH3-201ENST00000334859 ZNF540Q8NDQ6 660 aa17.03■□□□□ 0.32
LRCH3-201ENST00000334859 COQ8BQ96D53 544 aa17.03■□□□□ 0.32
LRCH3-201ENST00000334859 C7orf34Q96L11 122 aa17.03■□□□□ 0.32
LRCH3-201ENST00000334859 OR51B5Q9H339 312 aa17.03■□□□□ 0.32
LRCH3-201ENST00000334859 REEP4Q9H6H4 257 aa17.03■□□□□ 0.32
LRCH3-201ENST00000334859 NDRG4Q9ULP0 352 aaKnown RBP17.03■□□□□ 0.32
LRCH3-201ENST00000334859 FADS2O95864 444 aaKnown RBP17.02■□□□□ 0.32
LRCH3-201ENST00000334859 SOD1P00441 154 aa17.02■□□□□ 0.32
LRCH3-201ENST00000334859 HLA-EP13747 358 aa17.02■□□□□ 0.32
LRCH3-201ENST00000334859 ETFAP13804 333 aa17.02■□□□□ 0.32
LRCH3-201ENST00000334859 NPPBP16860 134 aa17.02■□□□□ 0.32
LRCH3-201ENST00000334859 RRM2P31350 389 aa17.02■□□□□ 0.32
LRCH3-201ENST00000334859 GPR1P46091 355 aa17.02■□□□□ 0.32
LRCH3-201ENST00000334859 HBA1P69905 142 aa17.02■□□□□ 0.32
LRCH3-201ENST00000334859 HTRA4P83105 476 aaPredicted RBP17.02■□□□□ 0.32
LRCH3-201ENST00000334859 CAMK2GQ13555 558 aaPredicted RBP17.02■□□□□ 0.32
LRCH3-201ENST00000334859 DGCR6Q14129 220 aa17.02■□□□□ 0.32
LRCH3-201ENST00000334859 MAD2L1BPQ15013 274 aaPredicted RBP17.02■□□□□ 0.32
LRCH3-201ENST00000334859 TEAD4Q15561 434 aa17.02■□□□□ 0.32
LRCH3-201ENST00000334859 PAGE2BQ5JRK9 111 aa17.02■□□□□ 0.32
LRCH3-201ENST00000334859 COX20Q5RI15 118 aa17.02■□□□□ 0.32
LRCH3-201ENST00000334859 ZNF852Q6ZMS4 543 aa17.02■□□□□ 0.32
LRCH3-201ENST00000334859 ARMCX6Q7L4S7 300 aa17.02■□□□□ 0.32
LRCH3-201ENST00000334859 SLC15A4Q8N697 577 aa17.02■□□□□ 0.32
LRCH3-201ENST00000334859 GIPC3Q8TF64 312 aa17.02■□□□□ 0.32
LRCH3-201ENST00000334859 POF1BQ8WVV4 589 aa17.02■□□□□ 0.32
LRCH3-201ENST00000334859 NUS1Q96E22 293 aa17.02■□□□□ 0.32
LRCH3-201ENST00000334859 COQ10AQ96MF6 247 aa17.02■□□□□ 0.32
LRCH3-201ENST00000334859 EFCAB11Q9BUY7 163 aa17.02■□□□□ 0.32
LRCH3-201ENST00000334859 BHLHE41Q9C0J9 482 aaPredicted RBP17.02■□□□□ 0.32
LRCH3-201ENST00000334859 DMRT3Q9NQL9 472 aa17.02■□□□□ 0.32
LRCH3-201ENST00000334859 EXO1Q9UQ84 846 aaKnown RBP17.02■□□□□ 0.32
LRCH3-201ENST00000334859 ZNF451Q9Y4E5 1061 aa17.02■□□□□ 0.32
LRCH3-201ENST00000334859 INSL6Q9Y581 213 aa17.02■□□□□ 0.32
LRCH3-201ENST00000334859 PCDHGA10Q9Y5H3 936 aa17.02■□□□□ 0.32
LRCH3-201ENST00000334859 PSMD11O00231 422 aa17.01■□□□□ 0.31
LRCH3-201ENST00000334859 PLK4O00444 970 aa17.01■□□□□ 0.31
LRCH3-201ENST00000334859 SPINT1O43278 529 aa17.01■□□□□ 0.31
LRCH3-201ENST00000334859 C6orf47O95873 294 aa17.01■□□□□ 0.31
LRCH3-201ENST00000334859 ZNF8P17098 575 aaPredicted RBP17.01■□□□□ 0.31
LRCH3-201ENST00000334859 JUNDP17535 347 aa17.01■□□□□ 0.31
LRCH3-201ENST00000334859 MLLT10P55197 1068 aa17.01■□□□□ 0.31
LRCH3-201ENST00000334859 MC1RQ01726 317 aa17.01■□□□□ 0.31
LRCH3-201ENST00000334859 FAHD1Q6P587 224 aa17.01■□□□□ 0.31
LRCH3-201ENST00000334859 NLRP8Q86W28 1048 aa17.01■□□□□ 0.31
LRCH3-201ENST00000334859 ANKRD13BQ86YJ7 626 aa17.01■□□□□ 0.31
LRCH3-201ENST00000334859 HCAR2Q8TDS4 363 aa17.01■□□□□ 0.31
LRCH3-201ENST00000334859 CIDECQ96AQ7 238 aaPredicted RBP17.01■□□□□ 0.31
LRCH3-201ENST00000334859 CXorf40BQ96DE9 158 aa17.01■□□□□ 0.31
LRCH3-201ENST00000334859 SLC35A5Q9BS91 424 aa17.01■□□□□ 0.31
LRCH3-201ENST00000334859 DOHHQ9BU89 302 aa17.01■□□□□ 0.31
LRCH3-201ENST00000334859 ATAD3AQ9NVI7 634 aa17.01■□□□□ 0.31
LRCH3-201ENST00000334859 ACSL6Q9UKU0 697 aa17.01■□□□□ 0.31
LRCH3-201ENST00000334859 TESMINQ9Y4I5 508 aa17.01■□□□□ 0.31
LRCH3-201ENST00000334859 AXIN1O15169 862 aa17.01■□□□□ 0.31
LRCH3-201ENST00000334859 MT-ND2P03891 347 aa17.01■□□□□ 0.31
LRCH3-201ENST00000334859 PRNPP04156 253 aa17.01■□□□□ 0.31
LRCH3-201ENST00000334859 TNFRSF1BP20333 461 aa17.01■□□□□ 0.31
LRCH3-201ENST00000334859 PSMB9P28065 219 aa17.01■□□□□ 0.31
LRCH3-201ENST00000334859 KRT20P35900 424 aa17.01■□□□□ 0.31
LRCH3-201ENST00000334859 PHEXP78562 749 aa17.01■□□□□ 0.31
LRCH3-201ENST00000334859 MESP2Q0VG99 397 aa17.01■□□□□ 0.31
LRCH3-201ENST00000334859 NPRL3Q12980 569 aa17.01■□□□□ 0.31
LRCH3-201ENST00000334859 CTF1Q16619 201 aa17.01■□□□□ 0.31
LRCH3-201ENST00000334859 FNDC3BQ53EP0 1204 aaKnown RBP17.01■□□□□ 0.31
LRCH3-201ENST00000334859 PRSS36Q5K4E3 855 aa17.01■□□□□ 0.31
LRCH3-201ENST00000334859 TSPYL5Q86VY4 417 aaPredicted RBP17.01■□□□□ 0.31
LRCH3-201ENST00000334859 PARP8Q8N3A8 854 aa17.01■□□□□ 0.31
LRCH3-201ENST00000334859 SMYD1Q8NB12 490 aa17.01■□□□□ 0.31
LRCH3-201ENST00000334859 OR9A1PQ8NGU1 263 aa17.01■□□□□ 0.31
LRCH3-201ENST00000334859 WDR48Q8TAF3 677 aa17.01■□□□□ 0.31
LRCH3-201ENST00000334859 SNRNP27Q8WVK2 155 aaKnown RBP17.01■□□□□ 0.31
LRCH3-201ENST00000334859 PPCDCQ96CD2 204 aa17.01■□□□□ 0.31
LRCH3-201ENST00000334859 LRRC3BQ96PB8 259 aa17.01■□□□□ 0.31
LRCH3-201ENST00000334859 EPYCQ99645 322 aa17.01■□□□□ 0.31
LRCH3-201ENST00000334859 DUSP21Q9H596 190 aa17.01■□□□□ 0.31
LRCH3-201ENST00000334859 SPASTQ9UBP0 616 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms