RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.36□□□□□ -1.55
PTPRB-202ENST00000334414 ABT1Q9ULW3 272 aaKnown RBP5.36□□□□□ -1.55
PTPRB-202ENST00000334414 CIB4A0PJX0 185 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 C20orf202A1L168 122 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 A8MVJ9 347 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 IMPA2O14732 288 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 RBBP9O75884 186 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 CD34P28906 385 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 PRKAG1P54619 331 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 WNT3AP56704 352 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 KCNJ11Q14654 390 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 PLA2G4EQ3MJ16 856 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 ZNF280BQ86YH2 543 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 ARRDC4Q8NCT1 418 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 PRRT1Q99946 306 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 ATG4BQ9Y4P1 393 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 CAPN5O15484 640 aaPredicted RBP5.36□□□□□ -1.55
PTPRB-202ENST00000334414 MFSD11O43934 449 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 ERAL1O75616 437 aaKnown RBP5.36□□□□□ -1.55
PTPRB-202ENST00000334414 FARS2O95363 451 aaKnown RBP5.36□□□□□ -1.55
PTPRB-202ENST00000334414 CDK1P06493 297 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 RANP62826 216 aaKnown RBP5.36□□□□□ -1.55
PTPRB-202ENST00000334414 IL10RBQ08334 325 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 DPYSL2Q16555 572 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 CDNFQ49AH0 187 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 UBE2NLQ5JXB2 153 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 PDSS1Q5T2R2 415 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 ANKRD23Q86SG2 305 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 PLD5Q8N7P1 536 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 PDCD2LQ9BRP1 358 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 SLC35A5Q9BS91 424 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 IDI2Q9BXS1 227 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 PPIL3Q9H2H8 161 aaKnown RBP5.36□□□□□ -1.55
PTPRB-202ENST00000334414 ZDHHC7Q9NXF8 308 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 CPQQ9Y646 472 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 OR6C75A6NL08 312 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 SCAMP3O14828 347 aaKnown RBP5.36□□□□□ -1.55
PTPRB-202ENST00000334414 AMHP03971 560 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 ARP10275 920 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 HSD3B2P26439 372 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 GRM5P41594 1212 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 CCR8P51685 355 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 CXCR4P61073 352 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 C14orf28Q4W4Y0 310 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 TMEM31Q5JXX7 168 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 ZNF550Q7Z398 422 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 PHTF2Q8N3S3 785 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 CHDHQ8NE62 594 aaPredicted RBP5.36□□□□□ -1.55
PTPRB-202ENST00000334414 CANT1Q8WVQ1 401 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 OR8D1Q8WZ84 308 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 OR52A5Q9H2C5 316 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 GRHPRQ9UBQ7 328 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 SH2B3Q9UQQ2 575 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 ASF1AQ9Y294 204 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 CACNG2Q9Y698 323 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 C13orf42A0A1B0GVH6 325 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 CCND3P30281 292 aaPredicted RBP5.36□□□□□ -1.55
PTPRB-202ENST00000334414 GSTM4Q03013 218 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 GALEQ14376 348 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 GANABQ14697 944 aaKnown RBP5.36□□□□□ -1.55
PTPRB-202ENST00000334414 TRAM2Q15035 370 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 PTPRRQ15256 657 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 SLC27A4Q6P1M0 643 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 OR8J1Q8NGP2 316 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 SOCS4Q8WXH5 440 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 TSSK3Q96PN8 268 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 OR2M2Q96R28 347 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 IL4I1Q96RQ9 567 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 ZNF382Q96SR6 550 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 ORAI3Q9BRQ5 295 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 LAMP5Q9UJQ1 280 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 CDHR4A6H8M9 788 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 RCCD1A6NED2 376 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 ZNF878C9JN71 531 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 H3BMQ9 156 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 TAS2R40P59535 323 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 PCDH1Q08174 1060 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 PUM1Q14671 1186 aaKnown RBP eCLIP5.36□□□□□ -1.55
PTPRB-202ENST00000334414 TSTD2Q5T7W7 516 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 SMARCD3Q6STE5 483 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 AQP11Q8NBQ7 271 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 COG8Q96MW5 612 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 PELOQ9BRX2 385 aaKnown RBP5.36□□□□□ -1.55
PTPRB-202ENST00000334414 CIPCQ9C0C6 399 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 SLC5A7Q9GZV3 580 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 PXDNQ92626 1479 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 STK25O00506 426 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 PRNPP04156 253 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 TUBG1P23258 451 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 CCKBRP32239 447 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 ECI1P42126 302 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 ZNF616Q08AN1 781 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 IKBKEQ14164 716 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 KRBOX4Q5JUW0 171 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 GAREM2Q75VX8 874 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 AKT1S1Q96B36 256 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 MYOZ2Q9NPC6 264 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 INPP5EQ9NRR6 644 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 PHPT1Q9NRX4 125 aaPredicted RBP5.36□□□□□ -1.55
PTPRB-202ENST00000334414 RPH3AQ9Y2J0 694 aaPredicted RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms