RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 MAN2B2Q9Y2E5 1009 aa17.53■□□□□ 0.4
PKP3-201ENST00000331563 RGS14O43566 566 aa17.53■□□□□ 0.4
PKP3-201ENST00000331563 TSPAN3O60637 253 aa17.53■□□□□ 0.4
PKP3-201ENST00000331563 GNPDA1P46926 289 aa17.53■□□□□ 0.4
PKP3-201ENST00000331563 ZNF79Q15937 498 aa17.53■□□□□ 0.4
PKP3-201ENST00000331563 FAM217AQ8IXS0 508 aa17.53■□□□□ 0.4
PKP3-201ENST00000331563 DBF4BQ8NFT6 615 aa17.53■□□□□ 0.4
PKP3-201ENST00000331563 TESCQ96BS2 214 aa17.53■□□□□ 0.4
PKP3-201ENST00000331563 INPP5KQ9BT40 448 aa17.53■□□□□ 0.4
PKP3-201ENST00000331563 POLMQ9NP87 494 aaPredicted RBP17.53■□□□□ 0.4
PKP3-201ENST00000331563 ASAH2Q9NR71 780 aa17.53■□□□□ 0.4
PKP3-201ENST00000331563 NEU3Q9UQ49 428 aa17.53■□□□□ 0.4
PKP3-201ENST00000331563 V9GYH0 126 aa17.53■□□□□ 0.4
PKP3-201ENST00000331563 M0R129 80 aa17.52■□□□□ 0.4
PKP3-201ENST00000331563 GFRA2O00451 464 aa17.52■□□□□ 0.4
PKP3-201ENST00000331563 IL1RNP18510 177 aa17.52■□□□□ 0.4
PKP3-201ENST00000331563 RPS19P39019 145 aaKnown RBP17.52■□□□□ 0.4
PKP3-201ENST00000331563 HOXC5Q00444 222 aa17.52■□□□□ 0.4
PKP3-201ENST00000331563 IHHQ14623 411 aa17.52■□□□□ 0.4
PKP3-201ENST00000331563 PTCHD3Q3KNS1 767 aa17.52■□□□□ 0.4
PKP3-201ENST00000331563 C1QTNF3Q9BXJ4 246 aa17.52■□□□□ 0.4
PKP3-201ENST00000331563 NIPAL2Q9H841 368 aa17.52■□□□□ 0.4
PKP3-201ENST00000331563 THSD7BQ9C0I4 1608 aa17.52■□□□□ 0.39
PKP3-201ENST00000331563 FNDC1Q4ZHG4 1894 aaPredicted RBP17.52■□□□□ 0.39
PKP3-201ENST00000331563 A0A075B6Q4 140 aa17.52■□□□□ 0.39
PKP3-201ENST00000331563 NIPSNAP2O75323 286 aa17.52■□□□□ 0.39
PKP3-201ENST00000331563 VPS26AO75436 327 aa17.52■□□□□ 0.39
PKP3-201ENST00000331563 GJB3O75712 270 aa17.52■□□□□ 0.39
PKP3-201ENST00000331563 IL2P60568 153 aa17.52■□□□□ 0.39
PKP3-201ENST00000331563 MXD1Q05195 221 aa17.52■□□□□ 0.39
PKP3-201ENST00000331563 SETMARQ53H47 684 aaPredicted RBP17.52■□□□□ 0.39
PKP3-201ENST00000331563 PLET1Q6UQ28 207 aa17.52■□□□□ 0.39
PKP3-201ENST00000331563 SLC24A5Q71RS6 500 aa17.52■□□□□ 0.39
PKP3-201ENST00000331563 GOLGA7Q7Z5G4 137 aa17.52■□□□□ 0.39
PKP3-201ENST00000331563 CPPED1Q9BRF8 314 aaPredicted RBP17.52■□□□□ 0.39
PKP3-201ENST00000331563 IPPKQ9H8X2 491 aa17.52■□□□□ 0.39
PKP3-201ENST00000331563 B3GALT4O96024 378 aa17.51■□□□□ 0.39
PKP3-201ENST00000331563 TGM4P49221 684 aa17.51■□□□□ 0.39
PKP3-201ENST00000331563 VEGFBP49765 207 aa17.51■□□□□ 0.39
PKP3-201ENST00000331563 ATAD1Q8NBU5 361 aa17.51■□□□□ 0.39
PKP3-201ENST00000331563 ZNF296Q8WUU4 475 aaPredicted RBP17.51■□□□□ 0.39
PKP3-201ENST00000331563 POP5Q969H6 163 aaKnown RBP17.51■□□□□ 0.39
PKP3-201ENST00000331563 SCLYQ96I15 445 aa17.51■□□□□ 0.39
PKP3-201ENST00000331563 HSH2DQ96JZ2 352 aa17.51■□□□□ 0.39
PKP3-201ENST00000331563 SRRQ9GZT4 340 aa17.51■□□□□ 0.39
PKP3-201ENST00000331563 HMX1Q9NP08 348 aaPredicted RBP17.51■□□□□ 0.39
PKP3-201ENST00000331563 ING3Q9NXR8 418 aa17.51■□□□□ 0.39
PKP3-201ENST00000331563 SLC23A1Q9UHI7 598 aa17.51■□□□□ 0.39
PKP3-201ENST00000331563 AUP1Q9Y679 476 aa17.51■□□□□ 0.39
PKP3-201ENST00000331563 UNC80Q8N2C7 3258 aa17.51■□□□□ 0.39
PKP3-201ENST00000331563 A0A0B4J293 547 aa17.51■□□□□ 0.39
PKP3-201ENST00000331563 M0QZQ0 153 aa17.51■□□□□ 0.39
PKP3-201ENST00000331563 C9P02748 559 aa17.51■□□□□ 0.39
PKP3-201ENST00000331563 MMP2P08253 660 aa17.51■□□□□ 0.39
PKP3-201ENST00000331563 HOXB1P14653 301 aaPredicted RBP17.51■□□□□ 0.39
PKP3-201ENST00000331563 OGNP20774 298 aaKnown RBP17.51■□□□□ 0.39
PKP3-201ENST00000331563 S100A3P33764 101 aa17.51■□□□□ 0.39
PKP3-201ENST00000331563 RORCP51449 518 aa17.51■□□□□ 0.39
PKP3-201ENST00000331563 GTF2H2Q13888 395 aa17.51■□□□□ 0.39
PKP3-201ENST00000331563 TCTN1Q2MV58 587 aa17.51■□□□□ 0.39
PKP3-201ENST00000331563 GTF2H2CQ6P1K8 395 aa17.51■□□□□ 0.39
PKP3-201ENST00000331563 KIAA1324Q6UXG2 1013 aaKnown RBP17.51■□□□□ 0.39
PKP3-201ENST00000331563 PRSS42Q7Z5A4 293 aa17.51■□□□□ 0.39
PKP3-201ENST00000331563 CALHM3Q86XJ0 350 aa17.51■□□□□ 0.39
PKP3-201ENST00000331563 SPATA2LQ8IUW3 424 aaPredicted RBP17.51■□□□□ 0.39
PKP3-201ENST00000331563 GPR150Q8NGU9 434 aa17.51■□□□□ 0.39
PKP3-201ENST00000331563 RNF31Q96EP0 1072 aa17.51■□□□□ 0.39
PKP3-201ENST00000331563 CRELD1Q96HD1 420 aa17.51■□□□□ 0.39
PKP3-201ENST00000331563 TRAF4Q9BUZ4 470 aaPredicted RBP17.51■□□□□ 0.39
PKP3-201ENST00000331563 MS4A12Q9NXJ0 267 aa17.51■□□□□ 0.39
PKP3-201ENST00000331563 OGDHLQ9ULD0 1010 aa17.51■□□□□ 0.39
PKP3-201ENST00000331563 DUSP12Q9UNI6 340 aa17.51■□□□□ 0.39
PKP3-201ENST00000331563 MED16Q9Y2X0 877 aa17.51■□□□□ 0.39
PKP3-201ENST00000331563 PTCH2Q9Y6C5 1203 aa17.51■□□□□ 0.39
PKP3-201ENST00000331563 TSC2P49815 1807 aa17.51■□□□□ 0.39
PKP3-201ENST00000331563 NBNO60934 754 aa17.5■□□□□ 0.39
PKP3-201ENST00000331563 GPX5O75715 221 aa17.5■□□□□ 0.39
PKP3-201ENST00000331563 GUCA1CO95843 209 aa17.5■□□□□ 0.39
PKP3-201ENST00000331563 ABHD18Q0P651 414 aa17.5■□□□□ 0.39
PKP3-201ENST00000331563 MAD2L1Q13257 205 aaPredicted RBP17.5■□□□□ 0.39
PKP3-201ENST00000331563 TATDN3Q17R31 274 aa17.5■□□□□ 0.39
PKP3-201ENST00000331563 PYDC2Q56P42 97 aa17.5■□□□□ 0.39
PKP3-201ENST00000331563 PDE12Q6L8Q7 609 aaKnown RBP17.5■□□□□ 0.39
PKP3-201ENST00000331563 RNF130Q86XS8 419 aa17.5■□□□□ 0.39
PKP3-201ENST00000331563 RTL3Q8N8U3 475 aaKnown RBP17.5■□□□□ 0.39
PKP3-201ENST00000331563 MTFMTQ96DP5 389 aaKnown RBP17.5■□□□□ 0.39
PKP3-201ENST00000331563 HMCESQ96FZ2 354 aa17.5■□□□□ 0.39
PKP3-201ENST00000331563 SUSD3Q96L08 255 aa17.5■□□□□ 0.39
PKP3-201ENST00000331563 ZNF578Q96N58 590 aaPredicted RBP17.5■□□□□ 0.39
PKP3-201ENST00000331563 PKMYT1Q99640 499 aa17.5■□□□□ 0.39
PKP3-201ENST00000331563 USB1Q9BQ65 265 aaKnown RBP17.5■□□□□ 0.39
PKP3-201ENST00000331563 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.5■□□□□ 0.39
PKP3-201ENST00000331563 NMUR1Q9HB89 426 aa17.5■□□□□ 0.39
PKP3-201ENST00000331563 CSNK1G1Q9HCP0 422 aa17.5■□□□□ 0.39
PKP3-201ENST00000331563 MRPL39Q9NYK5 338 aaKnown RBP17.5■□□□□ 0.39
PKP3-201ENST00000331563 RPS6KA6Q9UK32 745 aa17.5■□□□□ 0.39
PKP3-201ENST00000331563 CASP8AP2Q9UKL3 1982 aa17.5■□□□□ 0.39
PKP3-201ENST00000331563 NUP214P35658 2090 aaPredicted RBP17.5■□□□□ 0.39
PKP3-201ENST00000331563 E9PAM4 449 aa17.5■□□□□ 0.39
PKP3-201ENST00000331563 ALPPP05187 535 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms