RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 FOXK2Q01167 660 aa11.45□□□□□ -0.58
SHMT2-201ENST00000328923 MXD4Q14582 209 aaPredicted RBP11.45□□□□□ -0.58
SHMT2-201ENST00000328923 RBMS2Q15434 407 aaKnown RBP11.45□□□□□ -0.58
SHMT2-201ENST00000328923 TEAD4Q15561 434 aa11.45□□□□□ -0.58
SHMT2-201ENST00000328923 RFX4Q33E94 735 aa11.45□□□□□ -0.58
SHMT2-201ENST00000328923 ZNF528Q3MIS6 628 aa11.45□□□□□ -0.58
SHMT2-201ENST00000328923 OR7E24Q6IFN5 339 aa11.45□□□□□ -0.58
SHMT2-201ENST00000328923 RGMBQ6NW40 437 aa11.45□□□□□ -0.58
SHMT2-201ENST00000328923 KANSL1Q7Z3B3 1105 aa11.45□□□□□ -0.58
SHMT2-201ENST00000328923 SLC44A2Q8IWA5 706 aaPredicted RBP11.45□□□□□ -0.58
SHMT2-201ENST00000328923 TMEM132CQ8N3T6 1108 aa11.45□□□□□ -0.58
SHMT2-201ENST00000328923 DCBLD1Q8N8Z6 715 aa11.45□□□□□ -0.58
SHMT2-201ENST00000328923 DNAAF3Q8N9W5 541 aa11.45□□□□□ -0.58
SHMT2-201ENST00000328923 SLC13A3Q8WWT9 602 aa11.45□□□□□ -0.58
SHMT2-201ENST00000328923 EXOSC8Q96B26 276 aaKnown RBP11.45□□□□□ -0.58
SHMT2-201ENST00000328923 MED18Q9BUE0 208 aa11.45□□□□□ -0.58
SHMT2-201ENST00000328923 AKTIPQ9H8T0 292 aa11.45□□□□□ -0.58
SHMT2-201ENST00000328923 AMBNQ9NP70 447 aa11.45□□□□□ -0.58
SHMT2-201ENST00000328923 ERAP1Q9NZ08 941 aa11.45□□□□□ -0.58
SHMT2-201ENST00000328923 NDRG3Q9UGV2 375 aa11.45□□□□□ -0.58
SHMT2-201ENST00000328923 GTPBP1O00178 669 aaKnown RBP11.45□□□□□ -0.58
SHMT2-201ENST00000328923 SEC14L5O43304 696 aa11.45□□□□□ -0.58
SHMT2-201ENST00000328923 SUPT7LO94864 414 aa11.45□□□□□ -0.58
SHMT2-201ENST00000328923 LPLP06858 475 aa11.45□□□□□ -0.58
SHMT2-201ENST00000328923 NFICP08651 508 aa11.45□□□□□ -0.58
SHMT2-201ENST00000328923 RAB3BP20337 219 aa11.45□□□□□ -0.58
SHMT2-201ENST00000328923 GPX4P36969 197 aaPredicted RBP11.45□□□□□ -0.58
SHMT2-201ENST00000328923 SLC19A1P41440 591 aa11.45□□□□□ -0.58
SHMT2-201ENST00000328923 ALDH9A1P49189 494 aa11.45□□□□□ -0.58
SHMT2-201ENST00000328923 MAN2A2P49641 1150 aa11.45□□□□□ -0.58
SHMT2-201ENST00000328923 EEFSECP57772 596 aaKnown RBP11.45□□□□□ -0.58
SHMT2-201ENST00000328923 OLIG2Q13516 323 aa11.45□□□□□ -0.58
SHMT2-201ENST00000328923 ALKBH1Q13686 389 aaKnown RBP11.45□□□□□ -0.58
SHMT2-201ENST00000328923 MPEG1Q2M385 716 aa11.45□□□□□ -0.58
SHMT2-201ENST00000328923 PRAMEF19Q5SWL8 479 aa11.45□□□□□ -0.58
SHMT2-201ENST00000328923 CYB5R2Q6BCY4 276 aa11.45□□□□□ -0.58
SHMT2-201ENST00000328923 SLC25A25Q6KCM7 469 aa11.45□□□□□ -0.58
SHMT2-201ENST00000328923 RGS7BPQ6MZT1 257 aaPredicted RBP11.45□□□□□ -0.58
SHMT2-201ENST00000328923 RNF130Q86XS8 419 aa11.45□□□□□ -0.58
SHMT2-201ENST00000328923 MIER2Q8N344 545 aa11.45□□□□□ -0.58
SHMT2-201ENST00000328923 ZNF655Q8N720 491 aaPredicted RBP11.45□□□□□ -0.58
SHMT2-201ENST00000328923 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.45□□□□□ -0.58
SHMT2-201ENST00000328923 SLC35F5Q8WV83 523 aa11.45□□□□□ -0.58
SHMT2-201ENST00000328923 IPCEF1Q8WWN9 437 aaPredicted RBP11.45□□□□□ -0.58
SHMT2-201ENST00000328923 NELL1Q92832 810 aa11.45□□□□□ -0.58
SHMT2-201ENST00000328923 ZBED6CLQ96FA7 236 aaPredicted RBP11.45□□□□□ -0.58
SHMT2-201ENST00000328923 EXOC2Q96KP1 924 aa11.45□□□□□ -0.58
SHMT2-201ENST00000328923 C10orf90Q96M02 699 aa11.45□□□□□ -0.58
SHMT2-201ENST00000328923 BARD1Q99728 777 aaKnown RBP11.45□□□□□ -0.58
SHMT2-201ENST00000328923 TREX2Q9BQ50 279 aaPredicted RBP11.45□□□□□ -0.58
SHMT2-201ENST00000328923 C19orf43Q9BQ61 176 aa11.45□□□□□ -0.58
SHMT2-201ENST00000328923 WDR77Q9BQA1 342 aaPredicted RBP11.45□□□□□ -0.58
SHMT2-201ENST00000328923 OR51M1Q9H341 326 aa11.45□□□□□ -0.58
SHMT2-201ENST00000328923 RBFOX1Q9NWB1 397 aaKnown RBP11.45□□□□□ -0.58
SHMT2-201ENST00000328923 HCN3Q9P1Z3 774 aa11.45□□□□□ -0.58
SHMT2-201ENST00000328923 RBPJLQ9UBG7 517 aa11.45□□□□□ -0.58
SHMT2-201ENST00000328923 FZD10Q9ULW2 581 aa11.45□□□□□ -0.58
SHMT2-201ENST00000328923 ABT1Q9ULW3 272 aaKnown RBP11.45□□□□□ -0.58
SHMT2-201ENST00000328923 NDRG2Q9UN36 371 aaKnown RBP11.45□□□□□ -0.58
SHMT2-201ENST00000328923 CMAHPQ9Y471 501 aa11.45□□□□□ -0.58
SHMT2-201ENST00000328923 SLC28A1O00337 649 aa11.44□□□□□ -0.58
SHMT2-201ENST00000328923 ACKR2O00590 384 aa11.44□□□□□ -0.58
SHMT2-201ENST00000328923 PDCD5O14737 125 aa11.44□□□□□ -0.58
SHMT2-201ENST00000328923 PROM1O43490 865 aa11.44□□□□□ -0.58
SHMT2-201ENST00000328923 ORC5O43913 435 aa11.44□□□□□ -0.58
SHMT2-201ENST00000328923 SLC25A27O95847 323 aa11.44□□□□□ -0.58
SHMT2-201ENST00000328923 PGK1P00558 417 aa11.44□□□□□ -0.58
SHMT2-201ENST00000328923 TSPAN19P0C672 248 aa11.44□□□□□ -0.58
SHMT2-201ENST00000328923 FAM157BP0CG42 384 aa11.44□□□□□ -0.58
SHMT2-201ENST00000328923 SMIM6P0DI80 62 aa11.44□□□□□ -0.58
SHMT2-201ENST00000328923 CXCL8P10145 99 aa11.44□□□□□ -0.58
SHMT2-201ENST00000328923 CYP2B6P20813 491 aa11.44□□□□□ -0.58
SHMT2-201ENST00000328923 PCP4P48539 62 aa11.44□□□□□ -0.58
SHMT2-201ENST00000328923 FNTBP49356 437 aa11.44□□□□□ -0.58
SHMT2-201ENST00000328923 ACY1Q03154 408 aa11.44□□□□□ -0.58
SHMT2-201ENST00000328923 TRAM2Q15035 370 aa11.44□□□□□ -0.58
SHMT2-201ENST00000328923 TBCEQ15813 527 aaPredicted RBP11.44□□□□□ -0.58
SHMT2-201ENST00000328923 SNAPC1Q16533 368 aa11.44□□□□□ -0.58
SHMT2-201ENST00000328923 LCN1P1Q5VSP4 162 aa11.44□□□□□ -0.58
SHMT2-201ENST00000328923 PID1Q7Z2X4 250 aa11.44□□□□□ -0.58
SHMT2-201ENST00000328923 CCDC71Q8IV32 467 aaPredicted RBP11.44□□□□□ -0.58
SHMT2-201ENST00000328923 FAM181AQ8N9Y4 354 aa11.44□□□□□ -0.58
SHMT2-201ENST00000328923 OR11H7Q8NGC8 314 aa11.44□□□□□ -0.58
SHMT2-201ENST00000328923 ZDHHC12Q96GR4 267 aa11.44□□□□□ -0.58
SHMT2-201ENST00000328923 COQ10AQ96MF6 247 aa11.44□□□□□ -0.58
SHMT2-201ENST00000328923 TOX2Q96NM4 488 aa11.44□□□□□ -0.58
SHMT2-201ENST00000328923 GAS2L1Q99501 681 aaPredicted RBP11.44□□□□□ -0.58
SHMT2-201ENST00000328923 CMSS1Q9BQ75 279 aaKnown RBP11.44□□□□□ -0.58
SHMT2-201ENST00000328923 TMEM175Q9BSA9 504 aa11.44□□□□□ -0.58
SHMT2-201ENST00000328923 CRB3Q9BUF7 120 aa11.44□□□□□ -0.58
SHMT2-201ENST00000328923 BTBD1Q9H0C5 482 aa11.44□□□□□ -0.58
SHMT2-201ENST00000328923 PRDM12Q9H4Q4 367 aa11.44□□□□□ -0.58
SHMT2-201ENST00000328923 SLC52A3Q9NQ40 469 aa11.44□□□□□ -0.58
SHMT2-201ENST00000328923 KLHL8Q9P2G9 620 aaPredicted RBP11.44□□□□□ -0.58
SHMT2-201ENST00000328923 NDRG4Q9ULP0 352 aaKnown RBP11.44□□□□□ -0.58
SHMT2-201ENST00000328923 PPIEQ9UNP9 301 aaKnown RBP11.44□□□□□ -0.58
SHMT2-201ENST00000328923 BPTFQ12830 3046 aa11.44□□□□□ -0.58
SHMT2-201ENST00000328923 FABP12A6NFH5 140 aa11.44□□□□□ -0.58
SHMT2-201ENST00000328923 GPR37O15354 613 aa11.44□□□□□ -0.58
SHMT2-201ENST00000328923 AKAP8O43823 692 aaKnown RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms