RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 DCTN3O75935 186 aa4.94□□□□□ -1.62
LRIT3-201ENST00000327908 NCF1P14598 390 aaPredicted RBP4.94□□□□□ -1.62
LRIT3-201ENST00000327908 IDO1P14902 403 aa4.94□□□□□ -1.62
LRIT3-201ENST00000327908 PPIBP23284 216 aaKnown RBP4.94□□□□□ -1.62
LRIT3-201ENST00000327908 HOXD11P31277 338 aaPredicted RBP4.94□□□□□ -1.62
LRIT3-201ENST00000327908 RRADP55042 308 aa4.94□□□□□ -1.62
LRIT3-201ENST00000327908 PCBP4P57723 403 aaKnown RBP4.94□□□□□ -1.62
LRIT3-201ENST00000327908 RAB38P57729 211 aa4.94□□□□□ -1.62
LRIT3-201ENST00000327908 RPS15P62841 145 aaKnown RBP4.94□□□□□ -1.62
LRIT3-201ENST00000327908 DCDP81605 110 aaKnown RBP4.94□□□□□ -1.62
LRIT3-201ENST00000327908 HEPACAMQ14CZ8 416 aa4.94□□□□□ -1.62
LRIT3-201ENST00000327908 TERF2Q15554 542 aa4.94□□□□□ -1.62
LRIT3-201ENST00000327908 TOR1AIP1Q5JTV8 583 aa4.94□□□□□ -1.62
LRIT3-201ENST00000327908 IRAK1BP1Q5VVH5 260 aa4.94□□□□□ -1.62
LRIT3-201ENST00000327908 OR52E8Q6IFG1 317 aa4.94□□□□□ -1.62
LRIT3-201ENST00000327908 GALNT18Q6P9A2 607 aa4.94□□□□□ -1.62
LRIT3-201ENST00000327908 BHLHB9Q6PI77 547 aa4.94□□□□□ -1.62
LRIT3-201ENST00000327908 DND1Q8IYX4 353 aaKnown RBP4.94□□□□□ -1.62
LRIT3-201ENST00000327908 METTL4Q8N3J2 472 aa4.94□□□□□ -1.62
LRIT3-201ENST00000327908 LILRA3Q8N6C8 439 aaPredicted RBP4.94□□□□□ -1.62
LRIT3-201ENST00000327908 LINC01555Q8NAE3 123 aa4.94□□□□□ -1.62
LRIT3-201ENST00000327908 SPDYE1Q8NFV5 336 aaPredicted RBP4.94□□□□□ -1.62
LRIT3-201ENST00000327908 FLVCR1-AS1Q8TAF5 88 aa4.94□□□□□ -1.62
LRIT3-201ENST00000327908 ZNF473Q8WTR7 871 aaKnown RBP4.94□□□□□ -1.62
LRIT3-201ENST00000327908 ARL8AQ96BM9 186 aa4.94□□□□□ -1.62
LRIT3-201ENST00000327908 FAM136AQ96C01 138 aa4.94□□□□□ -1.62
LRIT3-201ENST00000327908 CHMP6Q96FZ7 201 aa4.94□□□□□ -1.62
LRIT3-201ENST00000327908 TGIF2Q9GZN2 237 aa4.94□□□□□ -1.62
LRIT3-201ENST00000327908 EVA1AQ9H8M9 152 aa4.94□□□□□ -1.62
LRIT3-201ENST00000327908 SLC6A20Q9NP91 592 aa4.94□□□□□ -1.62
LRIT3-201ENST00000327908 SEMA3GQ9NS98 782 aa4.94□□□□□ -1.62
LRIT3-201ENST00000327908 CUTCQ9NTM9 273 aa4.94□□□□□ -1.62
LRIT3-201ENST00000327908 PNMA8BQ9ULN7 279 aaPredicted RBP4.94□□□□□ -1.62
LRIT3-201ENST00000327908 CFAP20Q9Y6A4 193 aaKnown RBP4.94□□□□□ -1.62
LRIT3-201ENST00000327908 PIKFYVEQ9Y2I7 2098 aa4.94□□□□□ -1.62
LRIT3-201ENST00000327908 HYKKA2RU49 373 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 STMND1H3BQB6 276 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 RRP8O43159 456 aaKnown RBP4.93□□□□□ -1.62
LRIT3-201ENST00000327908 BRINP1O60477 761 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 ICAM2P13598 275 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 COX7A2P14406 83 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 SSR2P43308 183 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 MNAT1P51948 309 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 MRPS22P82650 360 aaKnown RBP4.93□□□□□ -1.62
LRIT3-201ENST00000327908 EMX2Q04743 252 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 SLC9A5Q14940 896 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 LSM12Q3MHD2 195 aaKnown RBP4.93□□□□□ -1.62
LRIT3-201ENST00000327908 SPDYAQ5MJ70 313 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 C16orf46Q6P387 395 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 LRRC69Q6ZNQ3 347 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 OR4F6Q8NGB9 312 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 NEIL2Q969S2 332 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 XKR8Q9H6D3 395 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 MEAF6Q9HAF1 191 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 LRTM1Q9HBL6 345 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 MYNNQ9NPC7 610 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 KLHL14Q9P2G3 628 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 PCDHGB7Q9Y5F8 929 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 PCDHGA6Q9Y5G7 932 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 SLCO1B1Q9Y6L6 691 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 CACNA1EQ15878 2313 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 TRBV23OR9-2A0A075B6M9 112 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 A0A1W2PQM1 296 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 H0YGG7 62 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 EML2O95834 649 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 LIPCP11150 499 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 HOXB6P17509 224 aaKnown RBP4.93□□□□□ -1.62
LRIT3-201ENST00000327908 MAGP20916 626 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 NTSP30990 170 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 LCN1P31025 176 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 CSF2RBP32927 897 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 ARF3P61204 181 aaPredicted RBP4.93□□□□□ -1.62
LRIT3-201ENST00000327908 ERVK-8P63133 956 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 RPP38P78345 283 aaKnown RBP4.93□□□□□ -1.62
LRIT3-201ENST00000327908 SRSF11Q05519 484 aaKnown RBP4.93□□□□□ -1.62
LRIT3-201ENST00000327908 RPS6KA2Q15349 733 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 KIAA1614Q5VZ46 1190 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 FCRL6Q6DN72 434 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 FAM92BQ6ZTR7 304 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 MYLK4Q86YV6 388 aaPredicted RBP4.93□□□□□ -1.62
LRIT3-201ENST00000327908 OR7G3Q8NG95 312 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 SNIP1Q8TAD8 396 aaKnown RBP4.93□□□□□ -1.62
LRIT3-201ENST00000327908 FCRL1Q96LA6 429 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 OR2A5Q96R48 311 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 RMND5AQ9H871 391 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 SEMA4BQ9NPR2 832 aaPredicted RBP4.93□□□□□ -1.62
LRIT3-201ENST00000327908 THUMPD1Q9NXG2 353 aaKnown RBP4.93□□□□□ -1.62
LRIT3-201ENST00000327908 ZIM2Q9NZV7 527 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 SLC17A7Q9P2U7 560 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 ZNF490Q9ULM2 529 aaPredicted RBP4.93□□□□□ -1.62
LRIT3-201ENST00000327908 CORO2BQ9UQ03 480 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 PCYT1BQ9Y5K3 369 aaPredicted RBP4.93□□□□□ -1.62
LRIT3-201ENST00000327908 TMEM131Q92545 1883 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 C1orf226A1L170 272 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 ZNF891A8MT65 544 aaPredicted RBP4.93□□□□□ -1.62
LRIT3-201ENST00000327908 BBIP1A8MTZ0 92 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 EDF1O60869 148 aaKnown RBP4.93□□□□□ -1.62
LRIT3-201ENST00000327908 SCRG1O75711 98 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 CAPN1P07384 714 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 ST6GAL1P15907 406 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms