RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 KCNH6Q9H252 994 aa17.98■□□□□ 0.47
EXOSC3-201ENST00000327304 IGKV1-8A0A0C4DH67 115 aa17.98■□□□□ 0.47
EXOSC3-201ENST00000327304 HSD3B1P14060 373 aa17.98■□□□□ 0.47
EXOSC3-201ENST00000327304 AMD1P17707 334 aa17.98■□□□□ 0.47
EXOSC3-201ENST00000327304 HSD3B2P26439 372 aa17.98■□□□□ 0.47
EXOSC3-201ENST00000327304 ALDH4A1P30038 563 aa17.98■□□□□ 0.47
EXOSC3-201ENST00000327304 SUZ12Q15022 739 aaKnown RBP17.98■□□□□ 0.47
EXOSC3-201ENST00000327304 TLR1Q15399 786 aa17.98■□□□□ 0.47
EXOSC3-201ENST00000327304 CSRP2Q16527 193 aa17.98■□□□□ 0.47
EXOSC3-201ENST00000327304 SPATS1Q496A3 300 aa17.98■□□□□ 0.47
EXOSC3-201ENST00000327304 Q8N9G6 341 aaPredicted RBP17.98■□□□□ 0.47
EXOSC3-201ENST00000327304 WDR34Q96EX3 536 aa17.98■□□□□ 0.47
EXOSC3-201ENST00000327304 METTL2AQ96IZ6 378 aaKnown RBP17.98■□□□□ 0.47
EXOSC3-201ENST00000327304 SPNS1Q9H2V7 528 aa17.98■□□□□ 0.47
EXOSC3-201ENST00000327304 S100A14Q9HCY8 104 aa17.98■□□□□ 0.47
EXOSC3-201ENST00000327304 SLC6A20Q9NP91 592 aa17.98■□□□□ 0.47
EXOSC3-201ENST00000327304 ABCD2Q9UBJ2 740 aa17.98■□□□□ 0.47
EXOSC3-201ENST00000327304 CD300AQ9UGN4 299 aa17.98■□□□□ 0.47
EXOSC3-201ENST00000327304 ANGPTL2Q9UKU9 493 aa17.98■□□□□ 0.47
EXOSC3-201ENST00000327304 KLHL20Q9Y2M5 609 aa17.98■□□□□ 0.47
EXOSC3-201ENST00000327304 PCDHGA11Q9Y5H2 935 aa17.98■□□□□ 0.47
EXOSC3-201ENST00000327304 ASXL3Q9C0F0 2248 aa17.98■□□□□ 0.47
EXOSC3-201ENST00000327304 CPED1A4D0V7 1026 aa17.97■□□□□ 0.47
EXOSC3-201ENST00000327304 C2orf74A8MZ97 194 aa17.97■□□□□ 0.47
EXOSC3-201ENST00000327304 ANP32DO95626 131 aa17.97■□□□□ 0.47
EXOSC3-201ENST00000327304 C1GALT1C1LP0DN25 315 aa17.97■□□□□ 0.47
EXOSC3-201ENST00000327304 PRPS2P11908 318 aa17.97■□□□□ 0.47
EXOSC3-201ENST00000327304 MAPK1P28482 360 aa17.97■□□□□ 0.47
EXOSC3-201ENST00000327304 CAPZBP47756 277 aa17.97■□□□□ 0.47
EXOSC3-201ENST00000327304 EPHA4P54764 986 aa17.97■□□□□ 0.47
EXOSC3-201ENST00000327304 MEF2AQ02078 507 aaPredicted RBP17.97■□□□□ 0.47
EXOSC3-201ENST00000327304 NR1D2Q14995 579 aa17.97■□□□□ 0.47
EXOSC3-201ENST00000327304 PROX2Q3B8N5 592 aa17.97■□□□□ 0.47
EXOSC3-201ENST00000327304 C10orf62Q5T681 223 aaPredicted RBP17.97■□□□□ 0.47
EXOSC3-201ENST00000327304 NKAIN2Q5VXU1 208 aa17.97■□□□□ 0.47
EXOSC3-201ENST00000327304 KIAA1614Q5VZ46 1190 aa17.97■□□□□ 0.47
EXOSC3-201ENST00000327304 ATG9BQ674R7 924 aa17.97■□□□□ 0.47
EXOSC3-201ENST00000327304 DBX2Q6ZNG2 339 aa17.97■□□□□ 0.47
EXOSC3-201ENST00000327304 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.97■□□□□ 0.47
EXOSC3-201ENST00000327304 SLC22A18Q96BI1 424 aa17.97■□□□□ 0.47
EXOSC3-201ENST00000327304 LRRC58Q96CX6 371 aa17.97■□□□□ 0.47
EXOSC3-201ENST00000327304 ASB9Q96DX5 294 aa17.97■□□□□ 0.47
EXOSC3-201ENST00000327304 PPM1MQ96MI6 270 aa17.97■□□□□ 0.47
EXOSC3-201ENST00000327304 ZBTB18Q99592 522 aa17.97■□□□□ 0.47
EXOSC3-201ENST00000327304 EHD1Q9H4M9 534 aa17.97■□□□□ 0.47
EXOSC3-201ENST00000327304 BRF2Q9HAW0 419 aa17.97■□□□□ 0.47
EXOSC3-201ENST00000327304 MRPS30Q9NP92 439 aaKnown RBP17.97■□□□□ 0.47
EXOSC3-201ENST00000327304 PACSIN3Q9UKS6 424 aa17.97■□□□□ 0.47
EXOSC3-201ENST00000327304 ENTPD2Q9Y5L3 495 aa17.97■□□□□ 0.47
EXOSC3-201ENST00000327304 EP300Q09472 2414 aaPredicted RBP17.97■□□□□ 0.47
EXOSC3-201ENST00000327304 ASPDHA6ND91 283 aa17.96■□□□□ 0.47
EXOSC3-201ENST00000327304 C9JVG2 144 aa17.96■□□□□ 0.47
EXOSC3-201ENST00000327304 H7BY64 318 aa17.96■□□□□ 0.47
EXOSC3-201ENST00000327304 FXYD1O00168 92 aa17.96■□□□□ 0.47
EXOSC3-201ENST00000327304 CASC3O15234 703 aaKnown RBP17.96■□□□□ 0.47
EXOSC3-201ENST00000327304 B4GAT1O43505 415 aa17.96■□□□□ 0.47
EXOSC3-201ENST00000327304 LRP3O75074 770 aa17.96■□□□□ 0.47
EXOSC3-201ENST00000327304 BCAS2O75934 225 aaPredicted RBP17.96■□□□□ 0.47
EXOSC3-201ENST00000327304 TGM1P22735 817 aa17.96■□□□□ 0.47
EXOSC3-201ENST00000327304 GRK6P43250 576 aa17.96■□□□□ 0.47
EXOSC3-201ENST00000327304 NEK2P51955 445 aa17.96■□□□□ 0.47
EXOSC3-201ENST00000327304 TRAP1Q12931 704 aaKnown RBP17.96■□□□□ 0.47
EXOSC3-201ENST00000327304 FLOT2Q14254 428 aa17.96■□□□□ 0.47
EXOSC3-201ENST00000327304 PERM1Q5SV97 790 aa17.96■□□□□ 0.47
EXOSC3-201ENST00000327304 SPESP1Q6UW49 350 aa17.96■□□□□ 0.47
EXOSC3-201ENST00000327304 PRR23CQ6ZRP0 262 aa17.96■□□□□ 0.47
EXOSC3-201ENST00000327304 LIX1Q8N485 282 aa17.96■□□□□ 0.47
EXOSC3-201ENST00000327304 DPP10Q8N608 796 aa17.96■□□□□ 0.47
EXOSC3-201ENST00000327304 ABHD11Q8NFV4 315 aa17.96■□□□□ 0.47
EXOSC3-201ENST00000327304 SLC26A7Q8TE54 656 aa17.96■□□□□ 0.47
EXOSC3-201ENST00000327304 VPS33AQ96AX1 596 aa17.96■□□□□ 0.47
EXOSC3-201ENST00000327304 PRAP1Q96NZ9 151 aa17.96■□□□□ 0.47
EXOSC3-201ENST00000327304 EVA1BQ9NVM1 165 aa17.96■□□□□ 0.47
EXOSC3-201ENST00000327304 GEMIN8Q9NWZ8 242 aaKnown RBP17.96■□□□□ 0.47
EXOSC3-201ENST00000327304 IGHV1OR21-1A0A087WYE8 117 aa17.95■□□□□ 0.46
EXOSC3-201ENST00000327304 ACOT8O14734 319 aa17.95■□□□□ 0.46
EXOSC3-201ENST00000327304 CCNDBP1O95273 360 aa17.95■□□□□ 0.46
EXOSC3-201ENST00000327304 CMPK1P30085 196 aa17.95■□□□□ 0.46
EXOSC3-201ENST00000327304 GPR3P46089 330 aa17.95■□□□□ 0.46
EXOSC3-201ENST00000327304 LSSP48449 732 aa17.95■□□□□ 0.46
EXOSC3-201ENST00000327304 PTDSS1P48651 473 aaKnown RBP17.95■□□□□ 0.46
EXOSC3-201ENST00000327304 PPM1FP49593 454 aaPredicted RBP17.95■□□□□ 0.46
EXOSC3-201ENST00000327304 ABATP80404 500 aa17.95■□□□□ 0.46
EXOSC3-201ENST00000327304 NFYCQ13952 458 aa17.95■□□□□ 0.46
EXOSC3-201ENST00000327304 TRIM25Q14258 630 aaKnown RBP17.95■□□□□ 0.46
EXOSC3-201ENST00000327304 SLBPQ14493 270 aaKnown RBP eCLIP17.95■□□□□ 0.46
EXOSC3-201ENST00000327304 ARMC6Q6NXE6 501 aa17.95■□□□□ 0.46
EXOSC3-201ENST00000327304 KLHL35Q6PF15 583 aa17.95■□□□□ 0.46
EXOSC3-201ENST00000327304 ZNF740Q8NDX6 193 aa17.95■□□□□ 0.46
EXOSC3-201ENST00000327304 REPS1Q96D71 796 aa17.95■□□□□ 0.46
EXOSC3-201ENST00000327304 FCRL1Q96LA6 429 aa17.95■□□□□ 0.46
EXOSC3-201ENST00000327304 EFCAB11Q9BUY7 163 aa17.95■□□□□ 0.46
EXOSC3-201ENST00000327304 DPY30Q9C005 99 aa17.95■□□□□ 0.46
EXOSC3-201ENST00000327304 ABCG4Q9H172 646 aa17.95■□□□□ 0.46
EXOSC3-201ENST00000327304 PELI2Q9HAT8 420 aa17.95■□□□□ 0.46
EXOSC3-201ENST00000327304 TMEM9BQ9NQ34 198 aa17.95■□□□□ 0.46
EXOSC3-201ENST00000327304 POMT2Q9UKY4 750 aa17.95■□□□□ 0.46
EXOSC3-201ENST00000327304 RP1P56715 2156 aa17.95■□□□□ 0.46
EXOSC3-201ENST00000327304 EME2A4GXA9 379 aaPredicted RBP17.95■□□□□ 0.46
EXOSC3-201ENST00000327304 PRORSD1PA6NEY8 169 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms