RNA–Protein interactions for RNA: ENST00000326656.12

PTPMT1-201, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-201ENST00000326656 ZXDCQ2QGD7 858 aaPredicted RBP16.68■□□□□ 0.26
PTPMT1-201ENST00000326656 BBS9Q3SYG4 887 aa16.68■□□□□ 0.26
PTPMT1-201ENST00000326656 HECTD2Q5U5R9 776 aa16.68■□□□□ 0.26
PTPMT1-201ENST00000326656 FAM45BPQ6NSW5 357 aa16.68■□□□□ 0.26
PTPMT1-201ENST00000326656 MYO7BQ6PIF6 2116 aa16.68■□□□□ 0.26
PTPMT1-201ENST00000326656 TMEM207Q6UWW9 146 aa16.68■□□□□ 0.26
PTPMT1-201ENST00000326656 GFRALQ6UXV0 394 aa16.68■□□□□ 0.26
PTPMT1-201ENST00000326656 LANCL3Q6ZV70 420 aa16.68■□□□□ 0.26
PTPMT1-201ENST00000326656 TICAM1Q8IUC6 712 aa16.68■□□□□ 0.26
PTPMT1-201ENST00000326656 IGDCC3Q8IVU1 814 aa16.68■□□□□ 0.26
PTPMT1-201ENST00000326656 NT5CQ8TCD5 201 aa16.68■□□□□ 0.26
PTPMT1-201ENST00000326656 FAM45AQ8TCE6 357 aa16.68■□□□□ 0.26
PTPMT1-201ENST00000326656 ALKBH8Q96BT7 664 aaKnown RBP16.68■□□□□ 0.26
PTPMT1-201ENST00000326656 KCNK13Q9HB14 408 aa16.68■□□□□ 0.26
PTPMT1-201ENST00000326656 ZFP69BQ9UJL9 534 aa16.68■□□□□ 0.26
PTPMT1-201ENST00000326656 ABCA12Q86UK0 2595 aa16.68■□□□□ 0.26
PTPMT1-201ENST00000326656 IGHV3-20A0A0C4DH32 117 aa16.67■□□□□ 0.26
PTPMT1-201ENST00000326656 GALR3O60755 368 aaPredicted RBP16.67■□□□□ 0.26
PTPMT1-201ENST00000326656 ZG16O60844 167 aa16.67■□□□□ 0.26
PTPMT1-201ENST00000326656 RDH16O75452 317 aa16.67■□□□□ 0.26
PTPMT1-201ENST00000326656 MLYCDO95822 493 aa16.67■□□□□ 0.26
PTPMT1-201ENST00000326656 ALOX12P18054 663 aa16.67■□□□□ 0.26
PTPMT1-201ENST00000326656 ELK3P41970 407 aa16.67■□□□□ 0.26
PTPMT1-201ENST00000326656 RHAGQ02094 409 aa16.67■□□□□ 0.26
PTPMT1-201ENST00000326656 RBPJQ06330 500 aa16.67■□□□□ 0.26
PTPMT1-201ENST00000326656 RGS1Q08116 209 aa16.67■□□□□ 0.26
PTPMT1-201ENST00000326656 CSHL1Q14406 222 aa16.67■□□□□ 0.26
PTPMT1-201ENST00000326656 ABRAXAS2Q15018 415 aa16.67■□□□□ 0.26
PTPMT1-201ENST00000326656 SLC5A8Q8N695 610 aa16.67■□□□□ 0.26
PTPMT1-201ENST00000326656 HORMAD2Q8N7B1 307 aa16.67■□□□□ 0.26
PTPMT1-201ENST00000326656 GPATCH11Q8N954 259 aa16.67■□□□□ 0.26
PTPMT1-201ENST00000326656 TRPV3Q8NET8 790 aa16.67■□□□□ 0.26
PTPMT1-201ENST00000326656 ZCCHC10Q8TBK6 192 aa16.67■□□□□ 0.26
PTPMT1-201ENST00000326656 TBC1D20Q96BZ9 403 aa16.67■□□□□ 0.26
PTPMT1-201ENST00000326656 PYCR2Q96C36 320 aa16.67■□□□□ 0.26
PTPMT1-201ENST00000326656 OR4K3Q96R72 315 aa16.67■□□□□ 0.26
PTPMT1-201ENST00000326656 UTP23Q9BRU9 249 aaKnown RBP16.67■□□□□ 0.26
PTPMT1-201ENST00000326656 RUBCNLQ9H714 662 aa16.67■□□□□ 0.26
PTPMT1-201ENST00000326656 LANCL2Q9NS86 450 aa16.67■□□□□ 0.26
PTPMT1-201ENST00000326656 SEC14L3Q9UDX4 400 aa16.67■□□□□ 0.26
PTPMT1-201ENST00000326656 TEX264Q9Y6I9 313 aa16.67■□□□□ 0.26
PTPMT1-201ENST00000326656 CROCCQ5TZA2 2017 aa16.67■□□□□ 0.26
PTPMT1-201ENST00000326656 URADA6NGE7 173 aa16.66■□□□□ 0.26
PTPMT1-201ENST00000326656 NDUFS4O43181 175 aa16.66■□□□□ 0.26
PTPMT1-201ENST00000326656 HNRNPRO43390 633 aaKnown RBP16.66■□□□□ 0.26
PTPMT1-201ENST00000326656 UNC5CO95185 931 aa16.66■□□□□ 0.26
PTPMT1-201ENST00000326656 F10P00742 488 aa16.66■□□□□ 0.26
PTPMT1-201ENST00000326656 SCTRP47872 440 aa16.66■□□□□ 0.26
PTPMT1-201ENST00000326656 KCNK10P57789 538 aa16.66■□□□□ 0.26
PTPMT1-201ENST00000326656 CBLBQ13191 982 aa16.66■□□□□ 0.26
PTPMT1-201ENST00000326656 ART3Q13508 389 aa16.66■□□□□ 0.26
PTPMT1-201ENST00000326656 KRTCAP3Q53RY4 240 aa16.66■□□□□ 0.26
PTPMT1-201ENST00000326656 SFT2D3Q587I9 215 aa16.66■□□□□ 0.26
PTPMT1-201ENST00000326656 ZNF766Q5HY98 468 aa16.66■□□□□ 0.26
PTPMT1-201ENST00000326656 STEAP4Q687X5 459 aa16.66■□□□□ 0.26
PTPMT1-201ENST00000326656 PAPD4Q6PIY7 484 aaKnown RBP16.66■□□□□ 0.26
PTPMT1-201ENST00000326656 ABHD13Q7L211 337 aa16.66■□□□□ 0.26
PTPMT1-201ENST00000326656 FJX1Q86VR8 437 aa16.66■□□□□ 0.26
PTPMT1-201ENST00000326656 NKAPQ8N5F7 415 aaKnown RBP16.66■□□□□ 0.26
PTPMT1-201ENST00000326656 ZNF740Q8NDX6 193 aa16.66■□□□□ 0.26
PTPMT1-201ENST00000326656 SLC5A11Q8WWX8 675 aa16.66■□□□□ 0.26
PTPMT1-201ENST00000326656 PEX11GQ96HA9 241 aa16.66■□□□□ 0.26
PTPMT1-201ENST00000326656 PLAC1Q9HBJ0 212 aa16.66■□□□□ 0.26
PTPMT1-201ENST00000326656 COPG2Q9UBF2 871 aa16.66■□□□□ 0.26
PTPMT1-201ENST00000326656 SUCOQ9UBS9 1254 aaKnown RBP16.66■□□□□ 0.26
PTPMT1-201ENST00000326656 KCNE2Q9Y6J6 123 aa16.66■□□□□ 0.26
PTPMT1-201ENST00000326656 APCP25054 2843 aa16.65■□□□□ 0.26
PTPMT1-201ENST00000326656 ENO4A6NNW6 628 aa16.65■□□□□ 0.26
PTPMT1-201ENST00000326656 TTI1O43156 1089 aa16.65■□□□□ 0.26
PTPMT1-201ENST00000326656 CHST10O43529 356 aa16.65■□□□□ 0.26
PTPMT1-201ENST00000326656 BANF1O75531 89 aa16.65■□□□□ 0.26
PTPMT1-201ENST00000326656 FHP07954 510 aa16.65■□□□□ 0.26
PTPMT1-201ENST00000326656 CD46P15529 392 aa16.65■□□□□ 0.26
PTPMT1-201ENST00000326656 MST1P26927 711 aa16.65■□□□□ 0.26
PTPMT1-201ENST00000326656 HNMTP50135 292 aa16.65■□□□□ 0.26
PTPMT1-201ENST00000326656 ARL4CP56559 192 aa16.65■□□□□ 0.26
PTPMT1-201ENST00000326656 TAS2R50P59544 299 aa16.65■□□□□ 0.26
PTPMT1-201ENST00000326656 CDKL1Q00532 357 aa16.65■□□□□ 0.26
PTPMT1-201ENST00000326656 TUBA3CQ13748 450 aa16.65■□□□□ 0.26
PTPMT1-201ENST00000326656 USP10Q14694 798 aaKnown RBP16.65■□□□□ 0.26
PTPMT1-201ENST00000326656 DEFB134Q4QY38 66 aa16.65■□□□□ 0.26
PTPMT1-201ENST00000326656 C1QL3Q5VWW1 255 aa16.65■□□□□ 0.26
PTPMT1-201ENST00000326656 TUBA3EQ6PEY2 450 aa16.65■□□□□ 0.26
PTPMT1-201ENST00000326656 SBSNQ6UWP8 590 aa16.65■□□□□ 0.26
PTPMT1-201ENST00000326656 CRLF3Q8IUI8 442 aa16.65■□□□□ 0.26
PTPMT1-201ENST00000326656 BEST3Q8N1M1 668 aa16.65■□□□□ 0.26
PTPMT1-201ENST00000326656 MDS2Q8NDY4 140 aa16.65■□□□□ 0.26
PTPMT1-201ENST00000326656 THAP3Q8WTV1 239 aaPredicted RBP16.65■□□□□ 0.26
PTPMT1-201ENST00000326656 NEIL2Q969S2 332 aa16.65■□□□□ 0.26
PTPMT1-201ENST00000326656 AIF1LQ9BQI0 150 aa16.65■□□□□ 0.26
PTPMT1-201ENST00000326656 PELI2Q9HAT8 420 aa16.65■□□□□ 0.26
PTPMT1-201ENST00000326656 KLF2Q9Y5W3 355 aaPredicted RBP16.65■□□□□ 0.26
PTPMT1-201ENST00000326656 OR2W5A6NFC9 320 aa16.64■□□□□ 0.25
PTPMT1-201ENST00000326656 NDC80O14777 642 aa16.64■□□□□ 0.25
PTPMT1-201ENST00000326656 ZNF37AP17032 561 aaPredicted RBP16.64■□□□□ 0.25
PTPMT1-201ENST00000326656 CD96P40200 585 aa16.64■□□□□ 0.25
PTPMT1-201ENST00000326656 CASP6P55212 293 aa16.64■□□□□ 0.25
PTPMT1-201ENST00000326656 OR4D2P58180 307 aa16.64■□□□□ 0.25
PTPMT1-201ENST00000326656 SLC26A5P58743 744 aa16.64■□□□□ 0.25
PTPMT1-201ENST00000326656 DR1Q01658 176 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms