RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 C6orf89Q6UWU4 347 aa14.58□□□□□ -0.08
PRPF3-201ENST00000324862 UBE3DQ7Z6J8 389 aa14.58□□□□□ -0.08
PRPF3-201ENST00000324862 B3GNT8Q7Z7M8 397 aa14.58□□□□□ -0.08
PRPF3-201ENST00000324862 PLXDC1Q8IUK5 500 aa14.58□□□□□ -0.08
PRPF3-201ENST00000324862 GBP7Q8N8V2 638 aaPredicted RBP14.58□□□□□ -0.08
PRPF3-201ENST00000324862 SARGQ9BW04 601 aa14.58□□□□□ -0.08
PRPF3-201ENST00000324862 RAB33BQ9H082 229 aa14.58□□□□□ -0.08
PRPF3-201ENST00000324862 ZNF385DQ9H6B1 395 aa14.58□□□□□ -0.08
PRPF3-201ENST00000324862 BRF2Q9HAW0 419 aa14.58□□□□□ -0.08
PRPF3-201ENST00000324862 LHX9Q9NQ69 397 aa14.58□□□□□ -0.08
PRPF3-201ENST00000324862 KLK4Q9Y5K2 254 aa14.58□□□□□ -0.08
PRPF3-201ENST00000324862 AP1M2Q9Y6Q5 423 aa14.58□□□□□ -0.08
PRPF3-201ENST00000324862 GVINP1Q7Z2Y8 2422 aa14.58□□□□□ -0.08
PRPF3-201ENST00000324862 LRIT2A6NDA9 550 aa14.57□□□□□ -0.08
PRPF3-201ENST00000324862 CPNE6O95741 557 aa14.57□□□□□ -0.08
PRPF3-201ENST00000324862 SPTBP11277 2137 aa14.57□□□□□ -0.08
PRPF3-201ENST00000324862 HRH2P25021 359 aa14.57□□□□□ -0.08
PRPF3-201ENST00000324862 RPS15AP62244 130 aaKnown RBP14.57□□□□□ -0.08
PRPF3-201ENST00000324862 ERVK-8P63133 956 aa14.57□□□□□ -0.08
PRPF3-201ENST00000324862 PRAMEF17Q5VTA0 474 aa14.57□□□□□ -0.08
PRPF3-201ENST00000324862 KHDRBS2Q5VWX1 349 aaKnown RBP14.57□□□□□ -0.08
PRPF3-201ENST00000324862 RNF165Q6ZSG1 346 aa14.57□□□□□ -0.08
PRPF3-201ENST00000324862 RNF44Q7L0R7 432 aa14.57□□□□□ -0.08
PRPF3-201ENST00000324862 OR6C4Q8NGE1 309 aa14.57□□□□□ -0.08
PRPF3-201ENST00000324862 ZCCHC10Q8TBK6 192 aa14.57□□□□□ -0.08
PRPF3-201ENST00000324862 GFM2Q969S9 779 aaKnown RBP14.57□□□□□ -0.08
PRPF3-201ENST00000324862 PPP3R2Q96LZ3 170 aa14.57□□□□□ -0.08
PRPF3-201ENST00000324862 CCT7Q99832 543 aa14.57□□□□□ -0.08
PRPF3-201ENST00000324862 C17orf62Q9BQA9 187 aa14.57□□□□□ -0.08
PRPF3-201ENST00000324862 CCDC106Q9BWC9 280 aa14.57□□□□□ -0.08
PRPF3-201ENST00000324862 ZNF717Q9BY31 904 aaPredicted RBP14.57□□□□□ -0.08
PRPF3-201ENST00000324862 REXO4Q9GZR2 422 aaKnown RBP14.57□□□□□ -0.08
PRPF3-201ENST00000324862 NT5DC2Q9H857 520 aa14.57□□□□□ -0.08
PRPF3-201ENST00000324862 MN1Q10571 1320 aaPredicted RBP14.57□□□□□ -0.08
PRPF3-201ENST00000324862 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.57□□□□□ -0.08
PRPF3-201ENST00000324862 EEDO75530 441 aaKnown RBP14.57□□□□□ -0.08
PRPF3-201ENST00000324862 KLHL18O94889 574 aa14.57□□□□□ -0.08
PRPF3-201ENST00000324862 CBX6O95503 412 aa14.57□□□□□ -0.08
PRPF3-201ENST00000324862 DEPDC1Q5TB30 811 aa14.57□□□□□ -0.08
PRPF3-201ENST00000324862 WDR74Q6RFH5 385 aaPredicted RBP14.57□□□□□ -0.08
PRPF3-201ENST00000324862 COMMD6Q7Z4G1 85 aa14.57□□□□□ -0.08
PRPF3-201ENST00000324862 ASPGQ86U10 573 aa14.57□□□□□ -0.08
PRPF3-201ENST00000324862 ZFAND4Q86XD8 727 aa14.57□□□□□ -0.08
PRPF3-201ENST00000324862 LIX1Q8N485 282 aa14.57□□□□□ -0.08
PRPF3-201ENST00000324862 POU5F2Q8N7G0 328 aa14.57□□□□□ -0.08
PRPF3-201ENST00000324862 C11orf24Q96F05 449 aaPredicted RBP14.57□□□□□ -0.08
PRPF3-201ENST00000324862 TSSK3Q96PN8 268 aa14.57□□□□□ -0.08
PRPF3-201ENST00000324862 ACTL8Q9H568 366 aa14.57□□□□□ -0.08
PRPF3-201ENST00000324862 IGHV5-10-1A0A0J9YXX1 117 aa14.56□□□□□ -0.08
PRPF3-201ENST00000324862 SERTM1A2A2V5 107 aa14.56□□□□□ -0.08
PRPF3-201ENST00000324862 CLEC3AO75596 197 aa14.56□□□□□ -0.08
PRPF3-201ENST00000324862 DCTN3O75935 186 aa14.56□□□□□ -0.08
PRPF3-201ENST00000324862 UBOX5O94941 541 aa14.56□□□□□ -0.08
PRPF3-201ENST00000324862 LRATO95237 230 aa14.56□□□□□ -0.08
PRPF3-201ENST00000324862 KLK1P06870 262 aa14.56□□□□□ -0.08
PRPF3-201ENST00000324862 BCKDHAP12694 445 aa14.56□□□□□ -0.08
PRPF3-201ENST00000324862 FOLR1P15328 257 aa14.56□□□□□ -0.08
PRPF3-201ENST00000324862 MLLT3P42568 568 aaPredicted RBP14.56□□□□□ -0.08
PRPF3-201ENST00000324862 UFM1P61960 85 aa14.56□□□□□ -0.08
PRPF3-201ENST00000324862 SLC14A1Q13336 389 aa14.56□□□□□ -0.08
PRPF3-201ENST00000324862 GPR19Q15760 415 aa14.56□□□□□ -0.08
PRPF3-201ENST00000324862 OGFOD2Q6N063 350 aa14.56□□□□□ -0.08
PRPF3-201ENST00000324862 TMEM71Q6P5X7 295 aa14.56□□□□□ -0.08
PRPF3-201ENST00000324862 PRSS41Q7RTY9 318 aa14.56□□□□□ -0.08
PRPF3-201ENST00000324862 MCATQ8IVS2 390 aaKnown RBP14.56□□□□□ -0.08
PRPF3-201ENST00000324862 CHCHD4Q8N4Q1 142 aa14.56□□□□□ -0.08
PRPF3-201ENST00000324862 DNAJC22Q8N4W6 341 aa14.56□□□□□ -0.08
PRPF3-201ENST00000324862 CDC26Q8NHZ8 85 aa14.56□□□□□ -0.08
PRPF3-201ENST00000324862 CHTF18Q8WVB6 975 aa14.56□□□□□ -0.08
PRPF3-201ENST00000324862 MS4A6EQ96DS6 147 aa14.56□□□□□ -0.08
PRPF3-201ENST00000324862 CMTM7Q96FZ5 175 aa14.56□□□□□ -0.08
PRPF3-201ENST00000324862 CCDC167Q9P0B6 97 aa14.56□□□□□ -0.08
PRPF3-201ENST00000324862 TSC22D4Q9Y3Q8 395 aa14.56□□□□□ -0.08
PRPF3-201ENST00000324862 GPR45Q9Y5Y3 372 aa14.56□□□□□ -0.08
PRPF3-201ENST00000324862 LOC100653049A0A140TA62 436 aa14.56□□□□□ -0.08
PRPF3-201ENST00000324862 CCT8L1PA6NM43 557 aa14.56□□□□□ -0.08
PRPF3-201ENST00000324862 ERI3O43414 337 aaKnown RBP14.56□□□□□ -0.08
PRPF3-201ENST00000324862 HYAL3O43820 417 aaPredicted RBP14.56□□□□□ -0.08
PRPF3-201ENST00000324862 DNAJB6O75190 326 aa14.56□□□□□ -0.08
PRPF3-201ENST00000324862 VPS4BO75351 444 aa14.56□□□□□ -0.08
PRPF3-201ENST00000324862 KRT34O76011 436 aa14.56□□□□□ -0.08
PRPF3-201ENST00000324862 MED26O95402 600 aa14.56□□□□□ -0.08
PRPF3-201ENST00000324862 ZBTB11O95625 1053 aaPredicted RBP14.56□□□□□ -0.08
PRPF3-201ENST00000324862 SDC1P18827 310 aa14.56□□□□□ -0.08
PRPF3-201ENST00000324862 PTX3P26022 381 aaPredicted RBP14.56□□□□□ -0.08
PRPF3-201ENST00000324862 AHRP35869 848 aa14.56□□□□□ -0.08
PRPF3-201ENST00000324862 GABRA4P48169 554 aa14.56□□□□□ -0.08
PRPF3-201ENST00000324862 EMX2Q04743 252 aa14.56□□□□□ -0.08
PRPF3-201ENST00000324862 ACSM2AQ08AH3 577 aa14.56□□□□□ -0.08
PRPF3-201ENST00000324862 TOR1AIP1Q5JTV8 583 aa14.56□□□□□ -0.08
PRPF3-201ENST00000324862 STPG1Q5TH74 334 aa14.56□□□□□ -0.08
PRPF3-201ENST00000324862 ACSM2BQ68CK6 577 aa14.56□□□□□ -0.08
PRPF3-201ENST00000324862 NOXRED1Q6NXP6 359 aa14.56□□□□□ -0.08
PRPF3-201ENST00000324862 ZNF793Q6ZN11 406 aa14.56□□□□□ -0.08
PRPF3-201ENST00000324862 KRTCAP2Q8N6L1 136 aa14.56□□□□□ -0.08
PRPF3-201ENST00000324862 TM4SF19Q96DZ7 209 aa14.56□□□□□ -0.08
PRPF3-201ENST00000324862 TEFMQ96QE5 360 aaKnown RBP14.56□□□□□ -0.08
PRPF3-201ENST00000324862 ARL8BQ9NVJ2 186 aa14.56□□□□□ -0.08
PRPF3-201ENST00000324862 AIG1Q9NVV5 245 aa14.56□□□□□ -0.08
PRPF3-201ENST00000324862 TRIM33Q9UPN9 1127 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms