RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 PITHD1Q9GZP4 211 aaPredicted RBP12.25□□□□□ -0.45
DDX39A-202ENST00000324340 SRMSQ9H3Y6 488 aa12.25□□□□□ -0.45
DDX39A-202ENST00000324340 ELOVL6Q9H5J4 265 aa12.25□□□□□ -0.45
DDX39A-202ENST00000324340 UCK1Q9HA47 277 aa12.25□□□□□ -0.45
DDX39A-202ENST00000324340 FARSBQ9NSD9 589 aaKnown RBP12.25□□□□□ -0.45
DDX39A-202ENST00000324340 CROTQ9UKG9 612 aa12.25□□□□□ -0.45
DDX39A-202ENST00000324340 TMEM131Q92545 1883 aa12.25□□□□□ -0.45
DDX39A-202ENST00000324340 PCM1Q15154 2024 aa12.24□□□□□ -0.45
DDX39A-202ENST00000324340 TRIM64BA6NI03 449 aa12.24□□□□□ -0.45
DDX39A-202ENST00000324340 B4DGG1 531 aa12.24□□□□□ -0.45
DDX39A-202ENST00000324340 BTN3A3O00478 584 aa12.24□□□□□ -0.45
DDX39A-202ENST00000324340 UBDO15205 165 aa12.24□□□□□ -0.45
DDX39A-202ENST00000324340 RGS14O43566 566 aa12.24□□□□□ -0.45
DDX39A-202ENST00000324340 NOBOXO60393 691 aa12.24□□□□□ -0.45
DDX39A-202ENST00000324340 RSL1D1O76021 490 aaKnown RBP12.24□□□□□ -0.45
DDX39A-202ENST00000324340 ANXA6P08133 673 aa12.24□□□□□ -0.45
DDX39A-202ENST00000324340 ALDOCP09972 364 aaKnown RBP12.24□□□□□ -0.45
DDX39A-202ENST00000324340 CDH1P12830 882 aa12.24□□□□□ -0.45
DDX39A-202ENST00000324340 NCF2P19878 526 aaPredicted RBP12.24□□□□□ -0.45
DDX39A-202ENST00000324340 PSMB5P28074 263 aa12.24□□□□□ -0.45
DDX39A-202ENST00000324340 ARRB1P49407 418 aaPredicted RBP12.24□□□□□ -0.45
DDX39A-202ENST00000324340 ATP4BP51164 291 aa12.24□□□□□ -0.45
DDX39A-202ENST00000324340 NUBP1P53384 320 aa12.24□□□□□ -0.45
DDX39A-202ENST00000324340 ESRRGP62508 458 aa12.24□□□□□ -0.45
DDX39A-202ENST00000324340 HHEXQ03014 270 aa12.24□□□□□ -0.45
DDX39A-202ENST00000324340 CSTF3Q12996 717 aaKnown RBP12.24□□□□□ -0.45
DDX39A-202ENST00000324340 SIM2Q14190 667 aaPredicted RBP12.24□□□□□ -0.45
DDX39A-202ENST00000324340 SLBPQ14493 270 aaKnown RBP eCLIP12.24□□□□□ -0.45
DDX39A-202ENST00000324340 KIR2DS3Q14952 304 aa12.24□□□□□ -0.45
DDX39A-202ENST00000324340 SHBQ15464 509 aa12.24□□□□□ -0.45
DDX39A-202ENST00000324340 KCTD21Q4G0X4 260 aa12.24□□□□□ -0.45
DDX39A-202ENST00000324340 C6orf136Q5SQH8 315 aa12.24□□□□□ -0.45
DDX39A-202ENST00000324340 TMEM198Q66K66 360 aa12.24□□□□□ -0.45
DDX39A-202ENST00000324340 MED27Q6P2C8 311 aa12.24□□□□□ -0.45
DDX39A-202ENST00000324340 SCIMPQ6UWF3 145 aa12.24□□□□□ -0.45
DDX39A-202ENST00000324340 C16orf89Q6UX73 402 aa12.24□□□□□ -0.45
DDX39A-202ENST00000324340 TMEM26Q6ZUK4 368 aa12.24□□□□□ -0.45
DDX39A-202ENST00000324340 CEP68Q76N32 757 aa12.24□□□□□ -0.45
DDX39A-202ENST00000324340 SPATA19Q7Z5L4 167 aa12.24□□□□□ -0.45
DDX39A-202ENST00000324340 ARL14Q8N4G2 192 aa12.24□□□□□ -0.45
DDX39A-202ENST00000324340 TSPAN14Q8NG11 270 aa12.24□□□□□ -0.45
DDX39A-202ENST00000324340 OR7G3Q8NG95 312 aa12.24□□□□□ -0.45
DDX39A-202ENST00000324340 FBXO27Q8NI29 283 aa12.24□□□□□ -0.45
DDX39A-202ENST00000324340 FLVCR1-AS1Q8TAF5 88 aa12.24□□□□□ -0.45
DDX39A-202ENST00000324340 CEP76Q8TAP6 659 aa12.24□□□□□ -0.45
DDX39A-202ENST00000324340 SNRNP27Q8WVK2 155 aaKnown RBP12.24□□□□□ -0.45
DDX39A-202ENST00000324340 SELENOMQ8WWX9 145 aa12.24□□□□□ -0.45
DDX39A-202ENST00000324340 PIGKQ92643 395 aa12.24□□□□□ -0.45
DDX39A-202ENST00000324340 UBE2E3Q969T4 207 aa12.24□□□□□ -0.45
DDX39A-202ENST00000324340 SLC22A18Q96BI1 424 aa12.24□□□□□ -0.45
DDX39A-202ENST00000324340 REPS1Q96D71 796 aa12.24□□□□□ -0.45
DDX39A-202ENST00000324340 PPP3R2Q96LZ3 170 aa12.24□□□□□ -0.45
DDX39A-202ENST00000324340 OSBPL11Q9BXB4 747 aa12.24□□□□□ -0.45
DDX39A-202ENST00000324340 ACPTQ9BZG2 426 aa12.24□□□□□ -0.45
DDX39A-202ENST00000324340 NT5DC2Q9H857 520 aa12.24□□□□□ -0.45
DDX39A-202ENST00000324340 BRF2Q9HAW0 419 aa12.24□□□□□ -0.45
DDX39A-202ENST00000324340 UCKL1Q9NWZ5 548 aa12.24□□□□□ -0.45
DDX39A-202ENST00000324340 SPHK1Q9NYA1 384 aa12.24□□□□□ -0.45
DDX39A-202ENST00000324340 TMEM9Q9P0T7 183 aa12.24□□□□□ -0.45
DDX39A-202ENST00000324340 DOLKQ9UPQ8 538 aa12.24□□□□□ -0.45
DDX39A-202ENST00000324340 GPC6Q9Y625 555 aaPredicted RBP12.24□□□□□ -0.45
DDX39A-202ENST00000324340 ARHGEF17Q96PE2 2063 aaPredicted RBP12.24□□□□□ -0.45
DDX39A-202ENST00000324340 SPAG17Q6Q759 2223 aa12.24□□□□□ -0.45
DDX39A-202ENST00000324340 TDRD6O60522 2096 aaKnown RBP12.23□□□□□ -0.45
DDX39A-202ENST00000324340 IGKV1-8A0A0C4DH67 115 aa12.23□□□□□ -0.45
DDX39A-202ENST00000324340 PIPSLA2A3N6 862 aa12.23□□□□□ -0.45
DDX39A-202ENST00000324340 FUOMA2VDF0 154 aa12.23□□□□□ -0.45
DDX39A-202ENST00000324340 FOXE1O00358 373 aaPredicted RBP12.23□□□□□ -0.45
DDX39A-202ENST00000324340 FBP2O00757 339 aa12.23□□□□□ -0.45
DDX39A-202ENST00000324340 DFNA5O60443 496 aa12.23□□□□□ -0.45
DDX39A-202ENST00000324340 CCNDBP1O95273 360 aa12.23□□□□□ -0.45
DDX39A-202ENST00000324340 H6PDO95479 791 aa12.23□□□□□ -0.45
DDX39A-202ENST00000324340 GIMD1P0DJR0 217 aa12.23□□□□□ -0.45
DDX39A-202ENST00000324340 THRAP10827 490 aa12.23□□□□□ -0.45
DDX39A-202ENST00000324340 HRH2P25021 359 aa12.23□□□□□ -0.45
DDX39A-202ENST00000324340 CXCR2P25025 360 aa12.23□□□□□ -0.45
DDX39A-202ENST00000324340 PCSK6P29122 969 aa12.23□□□□□ -0.45
DDX39A-202ENST00000324340 CCR8P51685 355 aa12.23□□□□□ -0.45
DDX39A-202ENST00000324340 NEK2P51955 445 aa12.23□□□□□ -0.45
DDX39A-202ENST00000324340 ERVK-8P63133 956 aa12.23□□□□□ -0.45
DDX39A-202ENST00000324340 YBX1P67809 324 aaKnown RBP12.23□□□□□ -0.45
DDX39A-202ENST00000324340 REEP5Q00765 189 aa12.23□□□□□ -0.45
DDX39A-202ENST00000324340 GRIK2Q13002 908 aa12.23□□□□□ -0.45
DDX39A-202ENST00000324340 UBAP2LQ14157 1087 aaKnown RBP12.23□□□□□ -0.45
DDX39A-202ENST00000324340 HIST2H2ACQ16777 129 aaPredicted RBP12.23□□□□□ -0.45
DDX39A-202ENST00000324340 DUOXA1Q1HG43 343 aa12.23□□□□□ -0.45
DDX39A-202ENST00000324340 ZBED5Q49AG3 693 aa12.23□□□□□ -0.45
DDX39A-202ENST00000324340 ATP6AP1LQ52LC2 224 aa12.23□□□□□ -0.45
DDX39A-202ENST00000324340 DEPDC1Q5TB30 811 aa12.23□□□□□ -0.45
DDX39A-202ENST00000324340 HIST2H2AA3Q6FI13 130 aa12.23□□□□□ -0.45
DDX39A-202ENST00000324340 KANSL1Q7Z3B3 1105 aa12.23□□□□□ -0.45
DDX39A-202ENST00000324340 CHERPQ8IWX8 916 aaKnown RBP12.23□□□□□ -0.45
DDX39A-202ENST00000324340 KRT78Q8N1N4 520 aa12.23□□□□□ -0.45
DDX39A-202ENST00000324340 SLC25A45Q8N413 288 aa12.23□□□□□ -0.45
DDX39A-202ENST00000324340 TRIML2Q8N7C3 387 aa12.23□□□□□ -0.45
DDX39A-202ENST00000324340 GPR156Q8NFN8 814 aa12.23□□□□□ -0.45
DDX39A-202ENST00000324340 OR2L3Q8NG85 312 aa12.23□□□□□ -0.45
DDX39A-202ENST00000324340 JPH3Q8WXH2 748 aaPredicted RBP12.23□□□□□ -0.45
DDX39A-202ENST00000324340 HSPBAP1Q96EW2 488 aa12.23□□□□□ -0.45
DDX39A-202ENST00000324340 HBEGFQ99075 208 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms