RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 FBXW2Q9UKT8 454 aa14.76□□□□□ -0.05
VARS2-201ENST00000321897 ING4Q9UNL4 249 aa14.76□□□□□ -0.05
VARS2-201ENST00000321897 PRAMEF33A0A0G2JMD5 474 aa14.76□□□□□ -0.05
VARS2-201ENST00000321897 SLC35F4A4IF30 521 aa14.76□□□□□ -0.05
VARS2-201ENST00000321897 NPIPB15A6NHN6 443 aaPredicted RBP14.76□□□□□ -0.05
VARS2-201ENST00000321897 ZNF701M0R085 212 aaPredicted RBP14.76□□□□□ -0.05
VARS2-201ENST00000321897 AREL1O15033 823 aa14.76□□□□□ -0.05
VARS2-201ENST00000321897 GMFGO60234 142 aa14.76□□□□□ -0.05
VARS2-201ENST00000321897 PRAMEF10O60809 474 aa14.76□□□□□ -0.05
VARS2-201ENST00000321897 LEFTY1O75610 366 aa14.76□□□□□ -0.05
VARS2-201ENST00000321897 FAM163BP0C2L3 166 aa14.76□□□□□ -0.05
VARS2-201ENST00000321897 FSHRP23945 695 aa14.76□□□□□ -0.05
VARS2-201ENST00000321897 TIE1P35590 1138 aa14.76□□□□□ -0.05
VARS2-201ENST00000321897 RPS13P62277 151 aaKnown RBP14.76□□□□□ -0.05
VARS2-201ENST00000321897 AKIRIN2Q53H80 203 aa14.76□□□□□ -0.05
VARS2-201ENST00000321897 PARGQ86W56 976 aa14.76□□□□□ -0.05
VARS2-201ENST00000321897 PEX5LQ8IYB4 626 aa14.76□□□□□ -0.05
VARS2-201ENST00000321897 ZZZ3Q8IYH5 903 aa14.76□□□□□ -0.05
VARS2-201ENST00000321897 SLCO4A1Q96BD0 722 aa14.76□□□□□ -0.05
VARS2-201ENST00000321897 ENPP5Q9UJA9 477 aa14.76□□□□□ -0.05
VARS2-201ENST00000321897 GTF2A1LQ9UNN4 478 aa14.76□□□□□ -0.05
VARS2-201ENST00000321897 OR1F1O43749 312 aa14.75□□□□□ -0.05
VARS2-201ENST00000321897 NUAK1O60285 661 aa14.75□□□□□ -0.05
VARS2-201ENST00000321897 FHP07954 510 aa14.75□□□□□ -0.05
VARS2-201ENST00000321897 SLC35G4P0C7Q5 338 aa14.75□□□□□ -0.05
VARS2-201ENST00000321897 RPS3P23396 243 aaKnown RBP eCLIP14.75□□□□□ -0.052e-8■■□□□ 13.5
VARS2-201ENST00000321897 RACK1P63244 317 aaKnown RBP14.75□□□□□ -0.05
VARS2-201ENST00000321897 ERICH5Q6P6B1 374 aa14.75□□□□□ -0.05
VARS2-201ENST00000321897 BHLHB9Q6PI77 547 aa14.75□□□□□ -0.05
VARS2-201ENST00000321897 GDPD4Q6W3E5 623 aa14.75□□□□□ -0.05
VARS2-201ENST00000321897 NUDT18Q6ZVK8 323 aa14.75□□□□□ -0.05
VARS2-201ENST00000321897 MRPL10Q7Z7H8 261 aaKnown RBP14.75□□□□□ -0.05
VARS2-201ENST00000321897 OR13F1Q8NGS4 319 aa14.75□□□□□ -0.05
VARS2-201ENST00000321897 LILRB4Q8NHJ6 448 aa14.75□□□□□ -0.05
VARS2-201ENST00000321897 MSANTD3Q96H12 275 aa14.75□□□□□ -0.05
VARS2-201ENST00000321897 MRM3Q9HC36 420 aaKnown RBP14.75□□□□□ -0.05
VARS2-201ENST00000321897 ZIM2Q9NZV7 527 aa14.75□□□□□ -0.05
VARS2-201ENST00000321897 CCDC59Q9P031 241 aaKnown RBP14.75□□□□□ -0.05
VARS2-201ENST00000321897 HSD17B1P14061 328 aa14.75□□□□□ -0.05
VARS2-201ENST00000321897 HOXD9P28356 352 aaPredicted RBP14.75□□□□□ -0.05
VARS2-201ENST00000321897 MAGEA11P43364 429 aa14.75□□□□□ -0.05
VARS2-201ENST00000321897 DSC3Q14574 896 aa14.75□□□□□ -0.05
VARS2-201ENST00000321897 INAVAQ3KP66 663 aa14.75□□□□□ -0.05
VARS2-201ENST00000321897 CARD16Q5EG05 197 aa14.75□□□□□ -0.05
VARS2-201ENST00000321897 AGTRAPQ6RW13 159 aa14.75□□□□□ -0.05
VARS2-201ENST00000321897 FAM129CQ86XR2 697 aa14.75□□□□□ -0.05
VARS2-201ENST00000321897 KCT2Q8NC54 265 aa14.75□□□□□ -0.05
VARS2-201ENST00000321897 C11orf65Q8NCR3 313 aa14.75□□□□□ -0.05
VARS2-201ENST00000321897 CHDHQ8NE62 594 aaPredicted RBP14.75□□□□□ -0.05
VARS2-201ENST00000321897 LKAAEAR1Q8TD35 194 aa14.75□□□□□ -0.05
VARS2-201ENST00000321897 JPH3Q8WXH2 748 aaPredicted RBP14.75□□□□□ -0.05
VARS2-201ENST00000321897 TMEM125Q96AQ2 219 aa14.75□□□□□ -0.05
VARS2-201ENST00000321897 TBC1D17Q9HA65 648 aa14.75□□□□□ -0.05
VARS2-201ENST00000321897 TPT1P8Q9HAU6 139 aa14.75□□□□□ -0.05
VARS2-201ENST00000321897 PTGFRNQ9P2B2 879 aa14.75□□□□□ -0.05
VARS2-201ENST00000321897 TBC1D3DA0A087WVF3 549 aa14.75□□□□□ -0.05
VARS2-201ENST00000321897 TBC1D3IA0A087WXS9 549 aa14.75□□□□□ -0.05
VARS2-201ENST00000321897 TBC1D3EA0A087X179 549 aa14.75□□□□□ -0.05
VARS2-201ENST00000321897 TBC1D3KA0A087X1G2 549 aa14.75□□□□□ -0.05
VARS2-201ENST00000321897 TBC1D3FA6NER0 549 aaPredicted RBP14.75□□□□□ -0.05
VARS2-201ENST00000321897 TBC1D3LB9A6J9 549 aa14.75□□□□□ -0.05
VARS2-201ENST00000321897 TNFRSF10BO14763 440 aa14.75□□□□□ -0.05
VARS2-201ENST00000321897 TBC1D3HP0C7X1 549 aa14.75□□□□□ -0.05
VARS2-201ENST00000321897 NOS3P29474 1203 aa14.75□□□□□ -0.05
VARS2-201ENST00000321897 EMX2Q04743 252 aa14.75□□□□□ -0.05
VARS2-201ENST00000321897 TBC1D3GQ6DHY5 549 aa14.75□□□□□ -0.05
VARS2-201ENST00000321897 TBC1D3CQ6IPX1 549 aa14.75□□□□□ -0.05
VARS2-201ENST00000321897 C22orf39Q6P5X5 142 aa14.75□□□□□ -0.05
VARS2-201ENST00000321897 TPRG1Q6ZUI0 275 aa14.75□□□□□ -0.05
VARS2-201ENST00000321897 C17orf64Q86WR6 236 aa14.75□□□□□ -0.05
VARS2-201ENST00000321897 TBC1D3Q8IZP1 549 aaPredicted RBP14.75□□□□□ -0.05
VARS2-201ENST00000321897 WFDC5Q8TCV5 224 aa14.75□□□□□ -0.05
VARS2-201ENST00000321897 GPR78Q96P69 363 aa14.75□□□□□ -0.05
VARS2-201ENST00000321897 TUBB1Q9H4B7 451 aa14.75□□□□□ -0.05
VARS2-201ENST00000321897 SEC14L3Q9UDX4 400 aa14.75□□□□□ -0.05
VARS2-201ENST00000321897 FBXO9Q9UK97 447 aaPredicted RBP14.75□□□□□ -0.05
VARS2-201ENST00000321897 IFT52Q9Y366 437 aa14.75□□□□□ -0.05
VARS2-201ENST00000321897 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.74□□□□□ -0.05
VARS2-201ENST00000321897 LEFTY2O00292 366 aa14.74□□□□□ -0.05
VARS2-201ENST00000321897 C8orf89P0DMQ9 161 aa14.74□□□□□ -0.05
VARS2-201ENST00000321897 ATP1B2P14415 290 aaPredicted RBP14.74□□□□□ -0.05
VARS2-201ENST00000321897 BTN2A2Q8WVV5 523 aa14.74□□□□□ -0.05
VARS2-201ENST00000321897 C11orf24Q96F05 449 aaPredicted RBP14.74□□□□□ -0.05
VARS2-201ENST00000321897 APIPQ96GX9 242 aa14.74□□□□□ -0.05
VARS2-201ENST00000321897 CHIAQ9BZP6 476 aa14.74□□□□□ -0.05
VARS2-201ENST00000321897 MMP27Q9H306 513 aa14.74□□□□□ -0.05
VARS2-201ENST00000321897 SDR39U1Q9NRG7 319 aaPredicted RBP14.74□□□□□ -0.05
VARS2-201ENST00000321897 THUMPD1Q9NXG2 353 aaKnown RBP14.74□□□□□ -0.05
VARS2-201ENST00000321897 MAT2BQ9NZL9 334 aa14.74□□□□□ -0.05
VARS2-201ENST00000321897 GVINP1Q7Z2Y8 2422 aa14.74□□□□□ -0.05
VARS2-201ENST00000321897 A0A096LPI6 279 aa14.74□□□□□ -0.05
VARS2-201ENST00000321897 ANKRD34BA5PLL1 514 aa14.74□□□□□ -0.05
VARS2-201ENST00000321897 SNTNA6NMZ2 147 aa14.74□□□□□ -0.05
VARS2-201ENST00000321897 C1QAP02745 245 aa14.74□□□□□ -0.05
VARS2-201ENST00000321897 C21orf33P30042 268 aaPredicted RBP14.74□□□□□ -0.05
VARS2-201ENST00000321897 HOXD11P31277 338 aaPredicted RBP14.74□□□□□ -0.05
VARS2-201ENST00000321897 DGKGP49619 791 aa14.74□□□□□ -0.05
VARS2-201ENST00000321897 ARF5P84085 180 aa14.74□□□□□ -0.05
VARS2-201ENST00000321897 WSCD2Q2TBF2 565 aa14.74□□□□□ -0.05
VARS2-201ENST00000321897 C9orf64Q5T6V5 341 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms