RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 CD320Q9NPF0 282 aa7.27□□□□□ -1.25
IFT88-201ENST00000319980 LMCD1Q9NZU5 365 aa7.27□□□□□ -1.25
IFT88-201ENST00000319980 CLEC1BQ9P126 229 aa7.27□□□□□ -1.25
IFT88-201ENST00000319980 FZD4Q9ULV1 537 aa7.27□□□□□ -1.25
IFT88-201ENST00000319980 TRPM6Q9BX84 2022 aa7.27□□□□□ -1.25
IFT88-201ENST00000319980 H7BY64 318 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 RPN2P04844 631 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 HBA1P69905 142 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 C2orf80Q0P641 193 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 GAB1Q13480 694 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 ADRM1Q16186 407 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 CYP2A13Q16696 494 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 TMEM196Q5HYL7 178 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 C10orf62Q5T681 223 aaPredicted RBP7.26□□□□□ -1.25
IFT88-201ENST00000319980 ZNF776Q68DI1 518 aaPredicted RBP7.26□□□□□ -1.25
IFT88-201ENST00000319980 FAM180BQ6P0A1 224 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 LCTLQ6UWM7 567 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 PATL1Q86TB9 770 aaKnown RBP7.26□□□□□ -1.25
IFT88-201ENST00000319980 FAM129CQ86XR2 697 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 ADHFE1Q8IWW8 467 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 KRT78Q8N1N4 520 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 ZFP28Q8NHY6 868 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.26□□□□□ -1.25
IFT88-201ENST00000319980 PMM1Q92871 262 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 MAL2Q969L2 176 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 UBE2E3Q969T4 207 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 NMD3Q96D46 503 aaKnown RBP7.26□□□□□ -1.25
IFT88-201ENST00000319980 COQ8BQ96D53 544 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 DGCR14Q96DF8 476 aaKnown RBP7.26□□□□□ -1.25
IFT88-201ENST00000319980 C12orf66Q96MD2 445 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 PRAP1Q96NZ9 151 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 HAUS8Q9BT25 410 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 REEP4Q9H6H4 257 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 FZD3Q9NPG1 666 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 IMP3Q9NV31 184 aaKnown RBP7.26□□□□□ -1.25
IFT88-201ENST00000319980 CUEDC1Q9NWM3 386 aaPredicted RBP7.26□□□□□ -1.25
IFT88-201ENST00000319980 NDUFA13Q9P0J0 144 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 SAMD4AQ9UPU9 718 aaKnown RBP7.26□□□□□ -1.25
IFT88-201ENST00000319980 KCNK6Q9Y257 313 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 ATG2BQ96BY7 2078 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 TBC1D3DA0A087WVF3 549 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 TBC1D3IA0A087WXS9 549 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 TBC1D3EA0A087X179 549 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 TBC1D3KA0A087X1G2 549 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 A0A1W2PQU0 124 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 FEZF1A0PJY2 475 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 TBC1D3FA6NER0 549 aaPredicted RBP7.26□□□□□ -1.25
IFT88-201ENST00000319980 ANKDD1BA6NHY2 528 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 TBC1D3LB9A6J9 549 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 SLC31A1O15431 190 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 FKBP9O95302 570 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 DNTTP04053 509 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 TBC1D3HP0C7X1 549 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 THRBP10828 461 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 POU3F3P20264 500 aaPredicted RBP7.26□□□□□ -1.25
IFT88-201ENST00000319980 PTX3P26022 381 aaPredicted RBP7.26□□□□□ -1.25
IFT88-201ENST00000319980 AQP1P29972 269 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 KDELR2P33947 212 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 PIK3CBP42338 1070 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 RPS21P63220 83 aaKnown RBP7.26□□□□□ -1.25
IFT88-201ENST00000319980 RAB30Q15771 203 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.26□□□□□ -1.25
IFT88-201ENST00000319980 ANKRD34AQ69YU3 496 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 TBC1D3GQ6DHY5 549 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 TBC1D3CQ6IPX1 549 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 ABRAXAS1Q6UWZ7 409 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 FKBP9P1Q75LS8 142 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 VN1R5Q7Z5H4 357 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 CAMKMTQ7Z624 323 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 VTCN1Q7Z7D3 282 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 PTOV1Q86YD1 416 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 ZDHHC21Q8IVQ6 265 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 ZZZ3Q8IYH5 903 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 TBC1D3Q8IZP1 549 aaPredicted RBP7.26□□□□□ -1.25
IFT88-201ENST00000319980 OXR1Q8N573 874 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 OR4A15Q8NGL6 344 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 C16orf78Q8WTQ4 265 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 CIDECQ96AQ7 238 aaPredicted RBP7.26□□□□□ -1.25
IFT88-201ENST00000319980 PPCDCQ96CD2 204 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 MUS81Q96NY9 551 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 FERD3LQ96RJ6 166 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 SLC17A9Q9BYT1 436 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 TRIT1Q9H3H1 467 aaKnown RBP7.26□□□□□ -1.25
IFT88-201ENST00000319980 MAGIXQ9H6Y5 334 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 PAPOLBQ9NRJ5 636 aaKnown RBP7.26□□□□□ -1.25
IFT88-201ENST00000319980 PHPT1Q9NRX4 125 aaPredicted RBP7.26□□□□□ -1.25
IFT88-201ENST00000319980 BTNL2Q9UIR0 455 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 PADI4Q9UM07 663 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 MAPRE3Q9UPY8 281 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 DNMT3AQ9Y6K1 912 aaPredicted RBP7.26□□□□□ -1.25
IFT88-201ENST00000319980 LRRK1Q38SD2 2015 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 MUC22E2RYF6 1773 aaPredicted RBP7.26□□□□□ -1.25
IFT88-201ENST00000319980 C1orf226A1L170 272 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 RTCAO00442 366 aaKnown RBP7.26□□□□□ -1.25
IFT88-201ENST00000319980 RNASET2O00584 256 aaKnown RBP7.26□□□□□ -1.25
IFT88-201ENST00000319980 KIF1CO43896 1103 aaKnown RBP7.26□□□□□ -1.25
IFT88-201ENST00000319980 NTSR1P30989 418 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 CRATP43155 626 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 TNFRSF4P43489 277 aa7.26□□□□□ -1.25
IFT88-201ENST00000319980 HNRNPFP52597 415 aaKnown RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms