RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 CHPFQ8IZ52 775 aa15.01□□□□□ -0.01
SHROOM1-201ENST00000319854 POF1BQ8WVV4 589 aa15.01□□□□□ -0.01
SHROOM1-201ENST00000319854 AGAP4Q96P64 663 aa15.01□□□□□ -0.01
SHROOM1-201ENST00000319854 KAT8Q9H7Z6 458 aaKnown RBP15.01□□□□□ -0.01
SHROOM1-201ENST00000319854 DDX28Q9NUL7 540 aaKnown RBP15.01□□□□□ -0.01
SHROOM1-201ENST00000319854 DKK3Q9UBP4 350 aa15.01□□□□□ -0.01
SHROOM1-201ENST00000319854 NOTCH4Q99466 2003 aa15□□□□□ -0.01
SHROOM1-201ENST00000319854 FADS2P1A8MWK0 482 aa15□□□□□ -0.01
SHROOM1-201ENST00000319854 DSCR3O14972 297 aa15□□□□□ -0.01
SHROOM1-201ENST00000319854 KMOO15229 486 aa15□□□□□ -0.01
SHROOM1-201ENST00000319854 DIRAS1O95057 198 aa15□□□□□ -0.01
SHROOM1-201ENST00000319854 CPSF4O95639 269 aaKnown RBP15□□□□□ -0.01
SHROOM1-201ENST00000319854 CTSLP07711 333 aa15□□□□□ -0.01
SHROOM1-201ENST00000319854 S100A3P33764 101 aa15□□□□□ -0.01
SHROOM1-201ENST00000319854 RPS14P62263 151 aaKnown RBP15□□□□□ -0.01
SHROOM1-201ENST00000319854 IRF8Q02556 426 aa15□□□□□ -0.01
SHROOM1-201ENST00000319854 XKR6Q5GH73 641 aa15□□□□□ -0.01
SHROOM1-201ENST00000319854 UGT2B28Q9BY64 529 aa15□□□□□ -0.01
SHROOM1-201ENST00000319854 REXO4Q9GZR2 422 aaKnown RBP15□□□□□ -0.01
SHROOM1-201ENST00000319854 SNX6Q9UNH7 406 aa15□□□□□ -0.01
SHROOM1-201ENST00000319854 ZNF682O95780 498 aa15□□□□□ -0.01
SHROOM1-201ENST00000319854 PDHA2P29803 388 aa15□□□□□ -0.01
SHROOM1-201ENST00000319854 VIPR2P41587 438 aa15□□□□□ -0.01
SHROOM1-201ENST00000319854 NEK10Q6ZWH5 1172 aa15□□□□□ -0.01
SHROOM1-201ENST00000319854 KIAA1958Q8N8K9 716 aa15□□□□□ -0.01
SHROOM1-201ENST00000319854 ECHDC3Q96DC8 303 aa15□□□□□ -0.01
SHROOM1-201ENST00000319854 RIBC2Q9H4K1 309 aa15□□□□□ -0.01
SHROOM1-201ENST00000319854 ZNF221Q9UK13 617 aa15□□□□□ -0.01
SHROOM1-201ENST00000319854 PRKAB1Q9Y478 270 aa15□□□□□ -0.01
SHROOM1-201ENST00000319854 CCRL2O00421 344 aa14.99□□□□□ -0.01
SHROOM1-201ENST00000319854 PTTG1O95997 202 aa14.99□□□□□ -0.01
SHROOM1-201ENST00000319854 GRK5P34947 590 aa14.99□□□□□ -0.01
SHROOM1-201ENST00000319854 TPRG1LQ5T0D9 272 aa14.99□□□□□ -0.01
SHROOM1-201ENST00000319854 LYPD8Q6UX82 237 aa14.99□□□□□ -0.01
SHROOM1-201ENST00000319854 SFTPA1Q8IWL2 248 aa14.99□□□□□ -0.01
SHROOM1-201ENST00000319854 MICU2Q8IYU8 434 aa14.99□□□□□ -0.01
SHROOM1-201ENST00000319854 SVOPLQ8N434 492 aa14.99□□□□□ -0.01
SHROOM1-201ENST00000319854 DPP10Q8N608 796 aa14.99□□□□□ -0.01
SHROOM1-201ENST00000319854 ASB11Q8WXH4 323 aa14.99□□□□□ -0.01
SHROOM1-201ENST00000319854 FAM120BQ96EK7 910 aaKnown RBP14.99□□□□□ -0.01
SHROOM1-201ENST00000319854 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.99□□□□□ -0.01
SHROOM1-201ENST00000319854 TRANK1O15050 2925 aa14.99□□□□□ -0.01
SHROOM1-201ENST00000319854 MYOGP15173 224 aa14.99□□□□□ -0.01
SHROOM1-201ENST00000319854 JUNDP17535 347 aa14.99□□□□□ -0.01
SHROOM1-201ENST00000319854 NNMTP40261 264 aa14.99□□□□□ -0.01
SHROOM1-201ENST00000319854 CLK1P49759 484 aaKnown RBP14.99□□□□□ -0.01
SHROOM1-201ENST00000319854 CHRNEQ04844 493 aa14.99□□□□□ -0.01
SHROOM1-201ENST00000319854 SLC14A1Q13336 389 aa14.99□□□□□ -0.01
SHROOM1-201ENST00000319854 FAM214AQ32MH5 1076 aa14.99□□□□□ -0.01
SHROOM1-201ENST00000319854 CBARPQ8N350 705 aaPredicted RBP14.99□□□□□ -0.01
SHROOM1-201ENST00000319854 ZNF548Q8NEK5 533 aaPredicted RBP14.99□□□□□ -0.01
SHROOM1-201ENST00000319854 TMEM246Q9BRR3 403 aa14.99□□□□□ -0.01
SHROOM1-201ENST00000319854 CDADC1Q9BWV3 514 aa14.99□□□□□ -0.01
SHROOM1-201ENST00000319854 CERS4Q9HA82 394 aa14.99□□□□□ -0.01
SHROOM1-201ENST00000319854 RASSF1Q9NS23 344 aa14.99□□□□□ -0.01
SHROOM1-201ENST00000319854 C14orf119Q9NWQ9 140 aa14.99□□□□□ -0.01
SHROOM1-201ENST00000319854 ERVW-1Q9UQF0 538 aa14.99□□□□□ -0.01
SHROOM1-201ENST00000319854 SAP18O00422 153 aaKnown RBP14.99□□□□□ -0.01
SHROOM1-201ENST00000319854 ALX3O95076 343 aa14.99□□□□□ -0.01
SHROOM1-201ENST00000319854 POLR2LP62875 67 aaKnown RBP14.99□□□□□ -0.01
SHROOM1-201ENST00000319854 GALK2Q01415 458 aa14.99□□□□□ -0.01
SHROOM1-201ENST00000319854 KIAA0040Q15053 153 aa14.99□□□□□ -0.01
SHROOM1-201ENST00000319854 Q5BKY6 102 aa14.99□□□□□ -0.01
SHROOM1-201ENST00000319854 OR5K1Q8NHB7 308 aa14.99□□□□□ -0.01
SHROOM1-201ENST00000319854 LRRC3BQ96PB8 259 aa14.99□□□□□ -0.01
SHROOM1-201ENST00000319854 NTMT1Q9BV86 223 aa14.99□□□□□ -0.01
SHROOM1-201ENST00000319854 MMP27Q9H306 513 aa14.99□□□□□ -0.01
SHROOM1-201ENST00000319854 GORASP2Q9H8Y8 452 aa14.99□□□□□ -0.01
SHROOM1-201ENST00000319854 PPT2Q9UMR5 302 aa14.99□□□□□ -0.01
SHROOM1-201ENST00000319854 ELOVL7A1L3X0 281 aa14.98□□□□□ -0.01
SHROOM1-201ENST00000319854 OR2A25A4D2G3 310 aa14.98□□□□□ -0.01
SHROOM1-201ENST00000319854 WASH3PC4AMC7 463 aa14.98□□□□□ -0.01
SHROOM1-201ENST00000319854 E7EQ34 232 aa14.98□□□□□ -0.01
SHROOM1-201ENST00000319854 HAT1O14929 419 aa14.98□□□□□ -0.01
SHROOM1-201ENST00000319854 MOSPD3O75425 235 aa14.98□□□□□ -0.01
SHROOM1-201ENST00000319854 ABCB1P08183 1280 aaPredicted RBP14.98□□□□□ -0.01
SHROOM1-201ENST00000319854 SDC1P18827 310 aa14.98□□□□□ -0.01
SHROOM1-201ENST00000319854 HTR3AP46098 478 aa14.98□□□□□ -0.01
SHROOM1-201ENST00000319854 CSNK1DP48730 415 aa14.98□□□□□ -0.01
SHROOM1-201ENST00000319854 USP39Q53GS9 565 aaKnown RBP14.98□□□□□ -0.01
SHROOM1-201ENST00000319854 DOK6Q6PKX4 331 aa14.98□□□□□ -0.01
SHROOM1-201ENST00000319854 ZNF621Q6ZSS3 439 aa14.98□□□□□ -0.01
SHROOM1-201ENST00000319854 CEP68Q76N32 757 aa14.98□□□□□ -0.01
SHROOM1-201ENST00000319854 EID3Q8N140 333 aa14.98□□□□□ -0.01
SHROOM1-201ENST00000319854 NETO1Q8TDF5 533 aa14.98□□□□□ -0.01
SHROOM1-201ENST00000319854 CHAC2Q8WUX2 184 aa14.98□□□□□ -0.01
SHROOM1-201ENST00000319854 LMLNQ96KR4 655 aa14.98□□□□□ -0.01
SHROOM1-201ENST00000319854 MCCC1Q96RQ3 725 aaPredicted RBP14.98□□□□□ -0.01
SHROOM1-201ENST00000319854 DPH2Q9BQC3 489 aaPredicted RBP14.98□□□□□ -0.01
SHROOM1-201ENST00000319854 TPRKBQ9Y3C4 175 aa14.98□□□□□ -0.01
SHROOM1-201ENST00000319854 GON4LQ3T8J9 2241 aa14.98□□□□□ -0.01
SHROOM1-201ENST00000319854 PDZK1P1A8MUH7 402 aa14.98□□□□□ -0.01
SHROOM1-201ENST00000319854 CXCR6O00574 342 aa14.98□□□□□ -0.01
SHROOM1-201ENST00000319854 SERPINA1P01009 418 aa14.98□□□□□ -0.01
SHROOM1-201ENST00000319854 ELFN1P0C7U0 828 aa14.98□□□□□ -0.01
SHROOM1-201ENST00000319854 CYP2A7P20853 494 aa14.98□□□□□ -0.01
SHROOM1-201ENST00000319854 GADD45AP24522 165 aa14.98□□□□□ -0.01
SHROOM1-201ENST00000319854 AQP1P29972 269 aa14.98□□□□□ -0.01
SHROOM1-201ENST00000319854 OR2B6P58173 313 aa14.98□□□□□ -0.01
SHROOM1-201ENST00000319854 MVKQ03426 396 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms