RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 TEX28O15482 410 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 GAAP10253 952 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 SLC2A2P11168 524 aaPredicted RBP4.61□□□□□ -1.67
PTPN13-201ENST00000316707 MYCLP1P12525 358 aaPredicted RBP4.61□□□□□ -1.67
PTPN13-201ENST00000316707 NUDT6P53370 316 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 RIN1Q13671 783 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 WSCD2Q2TBF2 565 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 PSAPL1Q6NUJ1 521 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 SUSD1Q6UWL2 747 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 PTOV1Q86YD1 416 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 PIANPQ8IYJ0 282 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 SLC22A15Q8IZD6 547 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 CBARPQ8N350 705 aaPredicted RBP4.61□□□□□ -1.67
PTPN13-201ENST00000316707 KRTCAP2Q8N6L1 136 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 RANBP3Q9H6Z4 567 aaPredicted RBP4.61□□□□□ -1.67
PTPN13-201ENST00000316707 TIGARQ9NQ88 270 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 EMC3Q9P0I2 261 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 SH3BP4Q9P0V3 963 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 GJD2Q9UKL4 321 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 MGAT4BQ9UQ53 548 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 ANGPT4Q9Y264 503 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 FAM170BA6NMN3 283 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 LOC730098B7Z3J9 87 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 PLD2O14939 933 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 CNMDO75829 334 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 HLA-DQB1P01920 261 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 HLA-DPB1P04440 258 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 PIRTP0C851 137 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 CR2P20023 1033 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 ADCYAP1R1P41586 468 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 CDH4P55283 916 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 CDH12P55289 794 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 EFEMP1Q12805 493 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 SP140Q13342 867 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 SF3A2Q15428 464 aaKnown RBP4.61□□□□□ -1.67
PTPN13-201ENST00000316707 VTCN1Q7Z7D3 282 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 FAM124AQ86V42 546 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 GHDCQ8N2G8 530 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 PNPLA1Q8N8W4 532 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 ACOT12Q8WYK0 555 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 FYTTD1Q96QD9 318 aaKnown RBP4.61□□□□□ -1.67
PTPN13-201ENST00000316707 PIP5K1AQ99755 562 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 GDF15Q99988 308 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 GPR63Q9BZJ6 419 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.61□□□□□ -1.67
PTPN13-201ENST00000316707 NDUFB11Q9NX14 153 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 MS4A12Q9NXJ0 267 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 ARL15Q9NXU5 204 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 COPZ2Q9P299 210 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 CRLS1Q9UJA2 301 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 V9GYH0 126 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 LY75O60449 1722 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 C12orf71A8MTZ7 269 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 SLC16A5O15375 505 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 LYRM1O43325 122 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 MTRF1O75570 445 aaKnown RBP4.61□□□□□ -1.67
PTPN13-201ENST00000316707 PRAMEF1O95521 474 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 IFNA16P05015 189 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 MYL12AP19105 171 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 TACR2P21452 398 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 EPHA2P29317 976 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 SLC6A4P31645 630 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 RPS19P39019 145 aaKnown RBP4.61□□□□□ -1.67
PTPN13-201ENST00000316707 BAG6P46379 1132 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 SLC11A2P49281 568 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 HNMTP50135 292 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 IRF8Q02556 426 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 TP53BP2Q13625 1128 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 TPBGQ13641 420 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 KCNC3Q14003 757 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 LAPTM4AQ15012 233 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 TATDN3Q17R31 274 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 NOXRED1Q6NXP6 359 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 AMIGO1Q86WK6 493 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 SDR16C5Q8N3Y7 309 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 PGBD5Q8N414 524 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 CAMKK1Q8N5S9 505 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 B3GNT7Q8NFL0 401 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 ZFP42Q96MM3 310 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 KCNS3Q9BQ31 491 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 RANGRFQ9HD47 186 aaPredicted RBP4.61□□□□□ -1.67
PTPN13-201ENST00000316707 FAM105AQ9NUU6 356 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 AASSQ9UDR5 926 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 UTS2RQ9UKP6 389 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 DLGAP4Q9Y2H0 992 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 ASB1Q9Y576 335 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 RAI2Q9Y5P3 530 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 ENPP4Q9Y6X5 453 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 XIRP1Q702N8 1843 aaKnown RBP4.61□□□□□ -1.67
PTPN13-201ENST00000316707 A6NL46 340 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 KPNA5O15131 536 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 FGF9P31371 208 aaPredicted RBP4.61□□□□□ -1.67
PTPN13-201ENST00000316707 PTGS2P35354 604 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 RACK1P63244 317 aaKnown RBP4.61□□□□□ -1.67
PTPN13-201ENST00000316707 OCLNQ16625 522 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 GLYR1Q49A26 553 aaPredicted RBP4.61□□□□□ -1.67
PTPN13-201ENST00000316707 TJAP1Q5JTD0 557 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 SAXO2Q658L1 398 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 SLC34A3Q8N130 599 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 SYNPOQ8N3V7 929 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 140.9 ms