RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 TAS2R50P59544 299 aa17.6■□□□□ 0.41
CCDC43-201ENST00000315286 CYP4F2P78329 520 aa17.6■□□□□ 0.41
CCDC43-201ENST00000315286 C2orf80Q0P641 193 aa17.6■□□□□ 0.41
CCDC43-201ENST00000315286 COL19A1Q14993 1142 aa17.6■□□□□ 0.41
CCDC43-201ENST00000315286 TBPL2Q6SJ96 375 aa17.6■□□□□ 0.41
CCDC43-201ENST00000315286 KIAA1324Q6UXG2 1013 aaKnown RBP17.6■□□□□ 0.41
CCDC43-201ENST00000315286 USP30Q70CQ3 517 aa17.6■□□□□ 0.41
CCDC43-201ENST00000315286 CLEC4FQ8N1N0 589 aa17.6■□□□□ 0.41
CCDC43-201ENST00000315286 OR4K1Q8NGD4 311 aa17.6■□□□□ 0.41
CCDC43-201ENST00000315286 RPLP0P6Q8NHW5 317 aa17.6■□□□□ 0.41
CCDC43-201ENST00000315286 CXorf40BQ96DE9 158 aa17.6■□□□□ 0.41
CCDC43-201ENST00000315286 C8orf33Q9H7E9 229 aaPredicted RBP17.6■□□□□ 0.41
CCDC43-201ENST00000315286 TPT1P8Q9HAU6 139 aa17.6■□□□□ 0.41
CCDC43-201ENST00000315286 KCNK12Q9HB15 430 aa17.6■□□□□ 0.41
CCDC43-201ENST00000315286 PRDM8Q9NQV8 689 aa17.6■□□□□ 0.41
CCDC43-201ENST00000315286 CA5BQ9Y2D0 317 aa17.6■□□□□ 0.41
CCDC43-201ENST00000315286 PRAMEF33A0A0G2JMD5 474 aa17.6■□□□□ 0.41
CCDC43-201ENST00000315286 C1orf226A1L170 272 aa17.6■□□□□ 0.41
CCDC43-201ENST00000315286 ANKDD1BA6NHY2 528 aa17.6■□□□□ 0.41
CCDC43-201ENST00000315286 PDZK1P1A8MUH7 402 aa17.6■□□□□ 0.41
CCDC43-201ENST00000315286 FURINP09958 794 aa17.6■□□□□ 0.41
CCDC43-201ENST00000315286 ACADMP11310 421 aa17.6■□□□□ 0.41
CCDC43-201ENST00000315286 ACSL1P33121 698 aa17.6■□□□□ 0.41
CCDC43-201ENST00000315286 FAM71E1Q6IPT2 247 aa17.6■□□□□ 0.41
CCDC43-201ENST00000315286 TMEM214Q6NUQ4 689 aaKnown RBP17.6■□□□□ 0.41
CCDC43-201ENST00000315286 SLC9B2Q86UD5 537 aa17.6■□□□□ 0.41
CCDC43-201ENST00000315286 SCARF2Q96GP6 870 aaPredicted RBP17.6■□□□□ 0.41
CCDC43-201ENST00000315286 BHLHE41Q9C0J9 482 aaPredicted RBP17.6■□□□□ 0.41
CCDC43-201ENST00000315286 YY1AP1Q9H869 796 aa17.6■□□□□ 0.41
CCDC43-201ENST00000315286 MYNNQ9NPC7 610 aa17.6■□□□□ 0.41
CCDC43-201ENST00000315286 C8orf4Q9NR00 106 aa17.6■□□□□ 0.41
CCDC43-201ENST00000315286 CD207Q9UJ71 328 aa17.6■□□□□ 0.41
CCDC43-201ENST00000315286 PLXND1Q9Y4D7 1925 aa17.6■□□□□ 0.41
CCDC43-201ENST00000315286 EME2A4GXA9 379 aaPredicted RBP17.59■□□□□ 0.41
CCDC43-201ENST00000315286 RNASET2O00584 256 aaKnown RBP17.59■□□□□ 0.41
CCDC43-201ENST00000315286 KCNJ13O60928 360 aa17.59■□□□□ 0.41
CCDC43-201ENST00000315286 NDUFV2P19404 249 aa17.59■□□□□ 0.41
CCDC43-201ENST00000315286 CXCR2P25025 360 aa17.59■□□□□ 0.41
CCDC43-201ENST00000315286 RAB28P51157 221 aa17.59■□□□□ 0.41
CCDC43-201ENST00000315286 KRT33BQ14525 404 aa17.59■□□□□ 0.41
CCDC43-201ENST00000315286 UAP1L1Q3KQV9 507 aa17.59■□□□□ 0.41
CCDC43-201ENST00000315286 TMEM31Q5JXX7 168 aa17.59■□□□□ 0.41
CCDC43-201ENST00000315286 ZZZ3Q8IYH5 903 aa17.59■□□□□ 0.41
CCDC43-201ENST00000315286 RAB42Q8N4Z0 105 aa17.59■□□□□ 0.41
CCDC43-201ENST00000315286 OR10Q1Q8NGQ4 319 aa17.59■□□□□ 0.41
CCDC43-201ENST00000315286 MAGEE2Q8TD90 523 aaPredicted RBP17.59■□□□□ 0.41
CCDC43-201ENST00000315286 ASB12Q8WXK4 309 aa17.59■□□□□ 0.41
CCDC43-201ENST00000315286 TMBIM1Q969X1 311 aa17.59■□□□□ 0.41
CCDC43-201ENST00000315286 ANKRD60Q9BZ19 345 aa17.59■□□□□ 0.41
CCDC43-201ENST00000315286 MYOCOSA0A1B0GUC4 107 aa17.59■□□□□ 0.41
CCDC43-201ENST00000315286 H0Y8X5 98 aa17.59■□□□□ 0.41
CCDC43-201ENST00000315286 ABCB1P08183 1280 aaPredicted RBP17.59■□□□□ 0.41
CCDC43-201ENST00000315286 SMIM18P0DKX4 95 aa17.59■□□□□ 0.41
CCDC43-201ENST00000315286 TPP2P29144 1249 aaPredicted RBP17.59■□□□□ 0.41
CCDC43-201ENST00000315286 REEP5Q00765 189 aa17.59■□□□□ 0.41
CCDC43-201ENST00000315286 GAB1Q13480 694 aa17.59■□□□□ 0.41
CCDC43-201ENST00000315286 PDE7AQ13946 482 aa17.59■□□□□ 0.41
CCDC43-201ENST00000315286 C16orf72Q14CZ0 275 aa17.59■□□□□ 0.41
CCDC43-201ENST00000315286 ADRM1Q16186 407 aa17.59■□□□□ 0.41
CCDC43-201ENST00000315286 VMACQ2NL98 169 aa17.59■□□□□ 0.41
CCDC43-201ENST00000315286 DEPDC1Q5TB30 811 aa17.59■□□□□ 0.41
CCDC43-201ENST00000315286 KHDRBS2Q5VWX1 349 aaKnown RBP17.59■□□□□ 0.41
CCDC43-201ENST00000315286 CPZQ66K79 652 aa17.59■□□□□ 0.41
CCDC43-201ENST00000315286 PTOV1Q86YD1 416 aa17.59■□□□□ 0.41
CCDC43-201ENST00000315286 APLFQ8IW19 511 aaPredicted RBP17.59■□□□□ 0.41
CCDC43-201ENST00000315286 OR4A15Q8NGL6 344 aa17.59■□□□□ 0.41
CCDC43-201ENST00000315286 F2RL3Q96RI0 385 aa17.59■□□□□ 0.41
CCDC43-201ENST00000315286 DPH2Q9BQC3 489 aaPredicted RBP17.59■□□□□ 0.41
CCDC43-201ENST00000315286 MS4A8Q9BY19 250 aa17.59■□□□□ 0.41
CCDC43-201ENST00000315286 OLAHQ9NV23 265 aa17.59■□□□□ 0.41
CCDC43-201ENST00000315286 SCHIP1Q9P0W5 487 aaPredicted RBP17.59■□□□□ 0.41
CCDC43-201ENST00000315286 SPASTQ9UBP0 616 aa17.59■□□□□ 0.41
CCDC43-201ENST00000315286 PRSS38A1L453 326 aa17.58■□□□□ 0.4
CCDC43-201ENST00000315286 PLPP1O14494 284 aa17.58■□□□□ 0.4
CCDC43-201ENST00000315286 MAP3K13O43283 966 aa17.58■□□□□ 0.4
CCDC43-201ENST00000315286 TNFAIP8O95379 198 aa17.58■□□□□ 0.4
CCDC43-201ENST00000315286 RPS9P46781 194 aaKnown RBP17.58■□□□□ 0.4
CCDC43-201ENST00000315286 CTBSQ01459 385 aa17.58■□□□□ 0.4
CCDC43-201ENST00000315286 MERTKQ12866 999 aa17.58■□□□□ 0.4
CCDC43-201ENST00000315286 PRSS53Q2L4Q9 553 aa17.58■□□□□ 0.4
CCDC43-201ENST00000315286 MPEG1Q2M385 716 aa17.58■□□□□ 0.4
CCDC43-201ENST00000315286 FOXB2Q5VYV0 432 aa17.58■□□□□ 0.4
CCDC43-201ENST00000315286 R3HCC1LQ7Z5L2 792 aaKnown RBP17.58■□□□□ 0.4
CCDC43-201ENST00000315286 OR52E1Q8NGJ3 308 aa17.58■□□□□ 0.4
CCDC43-201ENST00000315286 OR2A1Q8NGT9 310 aa17.58■□□□□ 0.4
CCDC43-201ENST00000315286 ZFP90Q8TF47 636 aa17.58■□□□□ 0.4
CCDC43-201ENST00000315286 CIDECQ96AQ7 238 aaPredicted RBP17.58■□□□□ 0.4
CCDC43-201ENST00000315286 PPCDCQ96CD2 204 aa17.58■□□□□ 0.4
CCDC43-201ENST00000315286 PYURFQ96I23 114 aa17.58■□□□□ 0.4
CCDC43-201ENST00000315286 ADI1Q9BV57 179 aa17.58■□□□□ 0.4
CCDC43-201ENST00000315286 ZNF717Q9BY31 904 aaPredicted RBP17.58■□□□□ 0.4
CCDC43-201ENST00000315286 ZNF696Q9H7X3 374 aa17.58■□□□□ 0.4
CCDC43-201ENST00000315286 ATAD3AQ9NVI7 634 aa17.58■□□□□ 0.4
CCDC43-201ENST00000315286 SNRNP200O75643 2136 aaKnown RBP17.57■□□□□ 0.4
CCDC43-201ENST00000315286 IGKV1-8A0A0C4DH67 115 aa17.57■□□□□ 0.4
CCDC43-201ENST00000315286 RTCAO00442 366 aaKnown RBP17.57■□□□□ 0.4
CCDC43-201ENST00000315286 CCNDBP1O95273 360 aa17.57■□□□□ 0.4
CCDC43-201ENST00000315286 CST1P01037 141 aa17.57■□□□□ 0.4
CCDC43-201ENST00000315286 IL3P08700 152 aa17.57■□□□□ 0.4
CCDC43-201ENST00000315286 GNAO1P09471 354 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms