RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 DGKEP52429 567 aa20.37■□□□□ 0.85
ATG4D-201ENST00000309469 CYP4F2P78329 520 aa20.37■□□□□ 0.85
ATG4D-201ENST00000309469 CSNK1G2P78368 415 aa20.37■□□□□ 0.85
ATG4D-201ENST00000309469 C2orf80Q0P641 193 aa20.37■□□□□ 0.85
ATG4D-201ENST00000309469 KHDRBS2Q5VWX1 349 aaKnown RBP20.37■□□□□ 0.85
ATG4D-201ENST00000309469 WASH2PQ6VEQ5 465 aa20.37■□□□□ 0.85
ATG4D-201ENST00000309469 CENPNQ96H22 339 aaPredicted RBP20.37■□□□□ 0.85
ATG4D-201ENST00000309469 REXO5Q96IC2 774 aaKnown RBP20.37■□□□□ 0.85
ATG4D-201ENST00000309469 CIB1Q99828 191 aa20.37■□□□□ 0.85
ATG4D-201ENST00000309469 BHLHE41Q9C0J9 482 aaPredicted RBP20.37■□□□□ 0.85
ATG4D-201ENST00000309469 HS3ST3A1Q9Y663 406 aa20.37■□□□□ 0.85
ATG4D-201ENST00000309469 FAM149AA5PLN7 773 aa20.37■□□□□ 0.85
ATG4D-201ENST00000309469 SEMA3DO95025 777 aa20.37■□□□□ 0.85
ATG4D-201ENST00000309469 EPN2O95208 641 aa20.37■□□□□ 0.85
ATG4D-201ENST00000309469 EML2O95834 649 aa20.37■□□□□ 0.85
ATG4D-201ENST00000309469 IGLV3-19P01714 112 aa20.37■□□□□ 0.85
ATG4D-201ENST00000309469 LYNP07948 512 aa20.37■□□□□ 0.85
ATG4D-201ENST00000309469 ENGP17813 658 aa20.37■□□□□ 0.85
ATG4D-201ENST00000309469 RPL3P39023 403 aaKnown RBP20.37■□□□□ 0.85
ATG4D-201ENST00000309469 HSPA13P48723 471 aa20.37■□□□□ 0.85
ATG4D-201ENST00000309469 TAS2R50P59544 299 aa20.37■□□□□ 0.85
ATG4D-201ENST00000309469 FAM71E1Q6IPT2 247 aa20.37■□□□□ 0.85
ATG4D-201ENST00000309469 R3HCC1LQ7Z5L2 792 aaKnown RBP20.37■□□□□ 0.85
ATG4D-201ENST00000309469 OR52E4Q8NGH9 312 aa20.37■□□□□ 0.85
ATG4D-201ENST00000309469 RNF145Q96MT1 663 aa20.37■□□□□ 0.85
ATG4D-201ENST00000309469 PHF12Q96QT6 1004 aa20.37■□□□□ 0.85
ATG4D-201ENST00000309469 CHID1Q9BWS9 393 aa20.37■□□□□ 0.85
ATG4D-201ENST00000309469 SORBS1Q9BX66 1292 aaKnown RBP20.37■□□□□ 0.85
ATG4D-201ENST00000309469 Q9H521 79 aa20.37■□□□□ 0.85
ATG4D-201ENST00000309469 KIR3DX1Q9H7L2 352 aa20.37■□□□□ 0.85
ATG4D-201ENST00000309469 DLGAP2Q9P1A6 1054 aa20.37■□□□□ 0.85
ATG4D-201ENST00000309469 AK5Q9Y6K8 562 aa20.37■□□□□ 0.85
ATG4D-201ENST00000309469 TNRC18O15417 2968 aaPredicted RBP20.36■□□□□ 0.85
ATG4D-201ENST00000309469 PCM1Q15154 2024 aa20.36■□□□□ 0.85
ATG4D-201ENST00000309469 IGKV1-8A0A0C4DH67 115 aa20.36■□□□□ 0.85
ATG4D-201ENST00000309469 A6NHS1 94 aa20.36■□□□□ 0.85
ATG4D-201ENST00000309469 DENRO43583 198 aaKnown RBP20.36■□□□□ 0.85
ATG4D-201ENST00000309469 OR1F1O43749 312 aa20.36■□□□□ 0.85
ATG4D-201ENST00000309469 PRICKLE3O43900 615 aaPredicted RBP20.36■□□□□ 0.85
ATG4D-201ENST00000309469 KDM1AO60341 852 aa20.36■□□□□ 0.85
ATG4D-201ENST00000309469 FURINP09958 794 aa20.36■□□□□ 0.85
ATG4D-201ENST00000309469 CHRNB1P11230 501 aa20.36■□□□□ 0.85
ATG4D-201ENST00000309469 CKMT2P17540 419 aa20.36■□□□□ 0.85
ATG4D-201ENST00000309469 EFNA1P20827 205 aaPredicted RBP20.36■□□□□ 0.85
ATG4D-201ENST00000309469 LRRC74AQ0VAA2 488 aa20.36■□□□□ 0.85
ATG4D-201ENST00000309469 SLC14A1Q13336 389 aa20.36■□□□□ 0.85
ATG4D-201ENST00000309469 PDE7AQ13946 482 aa20.36■□□□□ 0.85
ATG4D-201ENST00000309469 TCEA2Q15560 299 aa20.36■□□□□ 0.85
ATG4D-201ENST00000309469 SMAD2Q15796 467 aaKnown RBP20.36■□□□□ 0.85
ATG4D-201ENST00000309469 ZNF385BQ569K4 471 aa20.36■□□□□ 0.85
ATG4D-201ENST00000309469 ZNF852Q6ZMS4 543 aa20.36■□□□□ 0.85
ATG4D-201ENST00000309469 ZBTB49Q6ZSB9 765 aa20.36■□□□□ 0.85
ATG4D-201ENST00000309469 ZNF551Q7Z340 670 aaPredicted RBP20.36■□□□□ 0.85
ATG4D-201ENST00000309469 ADCK2Q7Z695 626 aa20.36■□□□□ 0.85
ATG4D-201ENST00000309469 SERPINA11Q86U17 422 aa20.36■□□□□ 0.85
ATG4D-201ENST00000309469 TMEM145Q8NBT3 493 aa20.36■□□□□ 0.85
ATG4D-201ENST00000309469 FAM162AQ96A26 154 aa20.36■□□□□ 0.85
ATG4D-201ENST00000309469 F2RL3Q96RI0 385 aa20.36■□□□□ 0.85
ATG4D-201ENST00000309469 SLC29A1Q99808 456 aa20.36■□□□□ 0.85
ATG4D-201ENST00000309469 TMEM168Q9H0V1 697 aa20.36■□□□□ 0.85
ATG4D-201ENST00000309469 C6orf106Q9H6K1 298 aaPredicted RBP20.36■□□□□ 0.85
ATG4D-201ENST00000309469 ATAD3AQ9NVI7 634 aa20.36■□□□□ 0.85
ATG4D-201ENST00000309469 PNMA8BQ9ULN7 279 aaPredicted RBP20.36■□□□□ 0.85
ATG4D-201ENST00000309469 RNASET2O00584 256 aaKnown RBP20.35■□□□□ 0.85
ATG4D-201ENST00000309469 PLPP1O14494 284 aa20.35■□□□□ 0.85
ATG4D-201ENST00000309469 C1QCP02747 245 aa20.35■□□□□ 0.85
ATG4D-201ENST00000309469 TPP2P29144 1249 aaPredicted RBP20.35■□□□□ 0.85
ATG4D-201ENST00000309469 CCT8P50990 548 aa20.35■□□□□ 0.85
ATG4D-201ENST00000309469 SRP54P61011 504 aaKnown RBP20.35■□□□□ 0.85
ATG4D-201ENST00000309469 MC1RQ01726 317 aa20.35■□□□□ 0.85
ATG4D-201ENST00000309469 NRF1Q16656 503 aa20.35■□□□□ 0.85
ATG4D-201ENST00000309469 PPP4R4Q6NUP7 873 aa20.35■□□□□ 0.85
ATG4D-201ENST00000309469 Q6ZSR6 202 aa20.35■□□□□ 0.85
ATG4D-201ENST00000309469 CCL4L1Q8NHW4 92 aa20.35■□□□□ 0.85
ATG4D-201ENST00000309469 UGT2B28Q9BY64 529 aa20.35■□□□□ 0.85
ATG4D-201ENST00000309469 PCOLCE2Q9UKZ9 415 aa20.35■□□□□ 0.85
ATG4D-201ENST00000309469 SAC3D1A6NKF1 404 aa20.35■□□□□ 0.85
ATG4D-201ENST00000309469 LCMT2O60294 686 aaKnown RBP20.35■□□□□ 0.85
ATG4D-201ENST00000309469 CREG1O75629 220 aa20.35■□□□□ 0.85
ATG4D-201ENST00000309469 RASGRP1O95267 797 aa20.35■□□□□ 0.85
ATG4D-201ENST00000309469 IGHV4-34P06331 123 aa20.35■□□□□ 0.85
ATG4D-201ENST00000309469 ZCCHC18P0CG32 403 aa20.35■□□□□ 0.85
ATG4D-201ENST00000309469 GPX2P18283 190 aa20.35■□□□□ 0.85
ATG4D-201ENST00000309469 NDUFS1P28331 727 aa20.35■□□□□ 0.85
ATG4D-201ENST00000309469 ATP6AP1Q15904 470 aa20.35■□□□□ 0.85
ATG4D-201ENST00000309469 ALG11Q2TAA5 492 aa20.35■□□□□ 0.85
ATG4D-201ENST00000309469 FAM98BQ52LJ0 330 aaKnown RBP20.35■□□□□ 0.85
ATG4D-201ENST00000309469 CCNYL2Q5T2Q4 361 aa20.35■□□□□ 0.85
ATG4D-201ENST00000309469 IKBIPQ70UQ0 350 aa20.35■□□□□ 0.85
ATG4D-201ENST00000309469 PPCDCQ96CD2 204 aa20.35■□□□□ 0.85
ATG4D-201ENST00000309469 MTERF3Q96E29 417 aa20.35■□□□□ 0.85
ATG4D-201ENST00000309469 ZNF597Q96LX8 424 aa20.35■□□□□ 0.85
ATG4D-201ENST00000309469 MRPS30Q9NP92 439 aaKnown RBP20.35■□□□□ 0.85
ATG4D-201ENST00000309469 SPASTQ9UBP0 616 aa20.35■□□□□ 0.85
ATG4D-201ENST00000309469 CYP8B1Q9UNU6 501 aa20.35■□□□□ 0.85
ATG4D-201ENST00000309469 AP4B1Q9Y6B7 739 aa20.35■□□□□ 0.85
ATG4D-201ENST00000309469 C7orf72A4D263 438 aa20.34■□□□□ 0.85
ATG4D-201ENST00000309469 RAP2AP10114 183 aa20.34■□□□□ 0.85
ATG4D-201ENST00000309469 ACTR1BP42025 376 aa20.34■□□□□ 0.85
ATG4D-201ENST00000309469 CCR5P51681 352 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms