RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 TRIP6Q15654 476 aaKnown RBP7.96□□□□□ -1.14
CHD6-201ENST00000309279 C14orf28Q4W4Y0 310 aa7.96□□□□□ -1.14
CHD6-201ENST00000309279 UBAP2Q5T6F2 1119 aaKnown RBP7.96□□□□□ -1.14
CHD6-201ENST00000309279 VHLLQ6RSH7 139 aa7.96□□□□□ -1.14
CHD6-201ENST00000309279 ZC3HC1Q86WB0 502 aaKnown RBP7.96□□□□□ -1.14
CHD6-201ENST00000309279 LIX1LQ8IVB5 337 aa7.96□□□□□ -1.14
CHD6-201ENST00000309279 KYQ8NBH2 561 aa7.96□□□□□ -1.14
CHD6-201ENST00000309279 DEFB124Q8NES8 71 aa7.96□□□□□ -1.14
CHD6-201ENST00000309279 OR9A1PQ8NGU1 263 aa7.96□□□□□ -1.14
CHD6-201ENST00000309279 LKAAEAR1Q8TD35 194 aa7.96□□□□□ -1.14
CHD6-201ENST00000309279 TSPEARQ8WU66 669 aa7.96□□□□□ -1.14
CHD6-201ENST00000309279 ASZ1Q8WWH4 475 aa7.96□□□□□ -1.14
CHD6-201ENST00000309279 PATE1Q8WXA2 126 aa7.96□□□□□ -1.14
CHD6-201ENST00000309279 LRTOMTQ8WZ04 291 aa7.96□□□□□ -1.14
CHD6-201ENST00000309279 ELMO1Q92556 727 aa7.96□□□□□ -1.14
CHD6-201ENST00000309279 CYTH2Q99418 400 aa7.96□□□□□ -1.14
CHD6-201ENST00000309279 CPNE1Q99829 537 aa7.96□□□□□ -1.14
CHD6-201ENST00000309279 AARSD1Q9BTE6 412 aaKnown RBP7.96□□□□□ -1.14
CHD6-201ENST00000309279 THUMPD3Q9BV44 507 aaKnown RBP7.96□□□□□ -1.14
CHD6-201ENST00000309279 PARD6BQ9BYG5 372 aa7.96□□□□□ -1.14
CHD6-201ENST00000309279 OBP2BQ9NPH6 170 aa7.96□□□□□ -1.14
CHD6-201ENST00000309279 FTSJ1Q9UET6 329 aa7.96□□□□□ -1.14
CHD6-201ENST00000309279 CNOT11Q9UKZ1 510 aaKnown RBP7.96□□□□□ -1.14
CHD6-201ENST00000309279 KNTC1P50748 2209 aa7.95□□□□□ -1.14
CHD6-201ENST00000309279 A4D1N5 150 aa7.95□□□□□ -1.14
CHD6-201ENST00000309279 CCDC151A5D8V7 595 aa7.95□□□□□ -1.14
CHD6-201ENST00000309279 B4DGG1 531 aa7.95□□□□□ -1.14
CHD6-201ENST00000309279 GTPBP1O00178 669 aaKnown RBP7.95□□□□□ -1.14
CHD6-201ENST00000309279 PEX1O43933 1283 aa7.95□□□□□ -1.14
CHD6-201ENST00000309279 SEC24DO94855 1032 aaPredicted RBP7.95□□□□□ -1.14
CHD6-201ENST00000309279 UBXN7O94888 489 aa7.95□□□□□ -1.14
CHD6-201ENST00000309279 ACSL3O95573 720 aa7.95□□□□□ -1.14
CHD6-201ENST00000309279 SCGB1D1O95968 90 aa7.95□□□□□ -1.14
CHD6-201ENST00000309279 GP1BAP07359 652 aa7.95□□□□□ -1.14
CHD6-201ENST00000309279 ABHD2P08910 425 aa7.95□□□□□ -1.14
CHD6-201ENST00000309279 CHRM3P20309 590 aa7.95□□□□□ -1.14
CHD6-201ENST00000309279 ACADLP28330 430 aa7.95□□□□□ -1.14
CHD6-201ENST00000309279 PDHA2P29803 388 aa7.95□□□□□ -1.14
CHD6-201ENST00000309279 SLC19A1P41440 591 aa7.95□□□□□ -1.14
CHD6-201ENST00000309279 CBX5P45973 191 aa7.95□□□□□ -1.14
CHD6-201ENST00000309279 POLR2GP62487 172 aaKnown RBP eCLIP7.95□□□□□ -1.14
CHD6-201ENST00000309279 ILKQ13418 452 aa7.95□□□□□ -1.14
CHD6-201ENST00000309279 NR1D2Q14995 579 aa7.95□□□□□ -1.14
CHD6-201ENST00000309279 NR0B2Q15466 257 aa7.95□□□□□ -1.14
CHD6-201ENST00000309279 PLEKHS1Q5SXH7 462 aa7.95□□□□□ -1.14
CHD6-201ENST00000309279 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.95□□□□□ -1.14
CHD6-201ENST00000309279 ATPAF1Q5TC12 328 aaPredicted RBP7.95□□□□□ -1.14
CHD6-201ENST00000309279 ERICH5Q6P6B1 374 aa7.95□□□□□ -1.14
CHD6-201ENST00000309279 TRAT1Q6PIZ9 186 aa7.95□□□□□ -1.14
CHD6-201ENST00000309279 OTOAQ7RTW8 1153 aa7.95□□□□□ -1.14
CHD6-201ENST00000309279 ZNF438Q7Z4V0 828 aa7.95□□□□□ -1.14
CHD6-201ENST00000309279 RETREG3Q86VR2 466 aa7.95□□□□□ -1.14
CHD6-201ENST00000309279 PHC2Q8IXK0 858 aa7.95□□□□□ -1.14
CHD6-201ENST00000309279 SLC15A3Q8IY34 581 aa7.95□□□□□ -1.14
CHD6-201ENST00000309279 GSPT2Q8IYD1 628 aaKnown RBP7.95□□□□□ -1.14
CHD6-201ENST00000309279 SLC22A15Q8IZD6 547 aa7.95□□□□□ -1.14
CHD6-201ENST00000309279 MAPK15Q8TD08 544 aa7.95□□□□□ -1.14
CHD6-201ENST00000309279 SLC37A2Q8TED4 501 aa7.95□□□□□ -1.14
CHD6-201ENST00000309279 NAT6Q93015 286 aa7.95□□□□□ -1.14
CHD6-201ENST00000309279 VPS33AQ96AX1 596 aa7.95□□□□□ -1.14
CHD6-201ENST00000309279 TMEM159Q96B96 161 aa7.95□□□□□ -1.14
CHD6-201ENST00000309279 DTNBP1Q96EV8 351 aa7.95□□□□□ -1.14
CHD6-201ENST00000309279 CCT7Q99832 543 aa7.95□□□□□ -1.14
CHD6-201ENST00000309279 ITPAQ9BY32 194 aa7.95□□□□□ -1.14
CHD6-201ENST00000309279 EPB41L4BQ9H329 900 aa7.95□□□□□ -1.14
CHD6-201ENST00000309279 RHOJQ9H4E5 214 aa7.95□□□□□ -1.14
CHD6-201ENST00000309279 POLE3Q9NRF9 147 aa7.95□□□□□ -1.14
CHD6-201ENST00000309279 EVA1BQ9NVM1 165 aa7.95□□□□□ -1.14
CHD6-201ENST00000309279 GALPQ9UBC7 116 aa7.95□□□□□ -1.14
CHD6-201ENST00000309279 CPNE7Q9UBL6 633 aa7.95□□□□□ -1.14
CHD6-201ENST00000309279 SATB2Q9UPW6 733 aa7.95□□□□□ -1.14
CHD6-201ENST00000309279 GAB2Q9UQC2 676 aa7.95□□□□□ -1.14
CHD6-201ENST00000309279 VWA7Q9Y334 891 aa7.95□□□□□ -1.14
CHD6-201ENST00000309279 DHRS7Q9Y394 339 aa7.95□□□□□ -1.14
CHD6-201ENST00000309279 NPFFR2Q9Y5X5 522 aa7.95□□□□□ -1.14
CHD6-201ENST00000309279 A0A087WUV0 522 aaPredicted RBP7.94□□□□□ -1.14
CHD6-201ENST00000309279 PDZK1P1A8MUH7 402 aa7.94□□□□□ -1.14
CHD6-201ENST00000309279 A8MXE2 369 aa7.94□□□□□ -1.14
CHD6-201ENST00000309279 E5RI56 91 aa7.94□□□□□ -1.14
CHD6-201ENST00000309279 PPM1DO15297 605 aa7.94□□□□□ -1.14
CHD6-201ENST00000309279 KCNK5O95279 499 aa7.94□□□□□ -1.14
CHD6-201ENST00000309279 MYF5P13349 255 aa7.94□□□□□ -1.14
CHD6-201ENST00000309279 ITGB6P18564 788 aa7.94□□□□□ -1.14
CHD6-201ENST00000309279 SERPINF1P36955 418 aa7.94□□□□□ -1.14
CHD6-201ENST00000309279 GP5P40197 560 aa7.94□□□□□ -1.14
CHD6-201ENST00000309279 PREPP48147 710 aa7.94□□□□□ -1.14
CHD6-201ENST00000309279 PCP4P48539 62 aa7.94□□□□□ -1.14
CHD6-201ENST00000309279 ACADVLP49748 655 aa7.94□□□□□ -1.14
CHD6-201ENST00000309279 MAZP56270 477 aaKnown RBP7.94□□□□□ -1.14
CHD6-201ENST00000309279 VBP1P61758 197 aa7.94□□□□□ -1.14
CHD6-201ENST00000309279 VAMP2P63027 116 aa7.94□□□□□ -1.14
CHD6-201ENST00000309279 SUMO1P63165 101 aaKnown RBP7.94□□□□□ -1.14
CHD6-201ENST00000309279 FOXK2Q01167 660 aa7.94□□□□□ -1.14
CHD6-201ENST00000309279 LIPEQ05469 1076 aa7.94□□□□□ -1.14
CHD6-201ENST00000309279 ASPHQ12797 758 aa7.94□□□□□ -1.14
CHD6-201ENST00000309279 DNAJC3Q13217 504 aa7.94□□□□□ -1.14
CHD6-201ENST00000309279 BOP1Q14137 746 aaKnown RBP7.94□□□□□ -1.14
CHD6-201ENST00000309279 PUM1Q14671 1186 aaKnown RBP eCLIP7.94□□□□□ -1.143e-7■■■■■ 30.5
CHD6-201ENST00000309279 RPE65Q16518 533 aa7.94□□□□□ -1.14
CHD6-201ENST00000309279 UGT3A1Q6NUS8 523 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms