RNA–Protein interactions for RNA: ENST00000309052.8

LCLAT1-201, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene LCLAT1, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-201ENST00000309052 TBC1D17Q9HA65 648 aa8.25□□□□□ -1.09
LCLAT1-201ENST00000309052 GMEB2Q9UKD1 530 aa8.25□□□□□ -1.09
LCLAT1-201ENST00000309052 MRPS17Q9Y2R5 130 aaKnown RBP8.25□□□□□ -1.09
LCLAT1-201ENST00000309052 GBF1Q92538 1859 aa8.25□□□□□ -1.09
LCLAT1-201ENST00000309052 PRKNO60260 465 aaPredicted RBP8.25□□□□□ -1.09
LCLAT1-201ENST00000309052 PSIP1O75475 530 aaKnown RBP8.25□□□□□ -1.09
LCLAT1-201ENST00000309052 RAB28P51157 221 aa8.25□□□□□ -1.09
LCLAT1-201ENST00000309052 RPE65Q16518 533 aa8.25□□□□□ -1.09
LCLAT1-201ENST00000309052 ZNF423Q2M1K9 1284 aa8.25□□□□□ -1.09
LCLAT1-201ENST00000309052 METRNLQ641Q3 311 aa8.25□□□□□ -1.09
LCLAT1-201ENST00000309052 SLCO4C1Q6ZQN7 724 aa8.25□□□□□ -1.09
LCLAT1-201ENST00000309052 CHSY3Q70JA7 882 aa8.25□□□□□ -1.09
LCLAT1-201ENST00000309052 OFCC1Q8IZS5 231 aa8.25□□□□□ -1.09
LCLAT1-201ENST00000309052 SMOC1Q9H4F8 434 aa8.25□□□□□ -1.09
LCLAT1-201ENST00000309052 TRPV4Q9HBA0 871 aa8.25□□□□□ -1.09
LCLAT1-201ENST00000309052 STX18Q9P2W9 335 aaKnown RBP8.25□□□□□ -1.09
LCLAT1-201ENST00000309052 C5orf58C9J3I9 102 aa8.25□□□□□ -1.09
LCLAT1-201ENST00000309052 PRKD3O94806 890 aa8.25□□□□□ -1.09
LCLAT1-201ENST00000309052 MATN4O95460 622 aa8.25□□□□□ -1.09
LCLAT1-201ENST00000309052 PIM1P11309 404 aaPredicted RBP8.25□□□□□ -1.09
LCLAT1-201ENST00000309052 POU2F1P14859 743 aa8.25□□□□□ -1.09
LCLAT1-201ENST00000309052 PHEXP78562 749 aa8.25□□□□□ -1.09
LCLAT1-201ENST00000309052 SIM1P81133 766 aaPredicted RBP8.25□□□□□ -1.09
LCLAT1-201ENST00000309052 GALNT1Q10472 559 aaPredicted RBP8.25□□□□□ -1.09
LCLAT1-201ENST00000309052 PWP1Q13610 501 aa8.25□□□□□ -1.09
LCLAT1-201ENST00000309052 GPR18Q14330 331 aa8.25□□□□□ -1.09
LCLAT1-201ENST00000309052 ALG11Q2TAA5 492 aa8.25□□□□□ -1.09
LCLAT1-201ENST00000309052 PYCR3Q53H96 274 aa8.25□□□□□ -1.09
LCLAT1-201ENST00000309052 PIGGQ5H8A4 983 aa8.25□□□□□ -1.09
LCLAT1-201ENST00000309052 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.25□□□□□ -1.09
LCLAT1-201ENST00000309052 NKAIN2Q5VXU1 208 aa8.25□□□□□ -1.09
LCLAT1-201ENST00000309052 LINC01555Q8NAE3 123 aa8.25□□□□□ -1.09
LCLAT1-201ENST00000309052 ATOH1Q92858 354 aaPredicted RBP8.25□□□□□ -1.09
LCLAT1-201ENST00000309052 SDCCAG3Q96C92 435 aa8.25□□□□□ -1.09
LCLAT1-201ENST00000309052 NTMT1Q9BV86 223 aa8.25□□□□□ -1.09
LCLAT1-201ENST00000309052 OR52A5Q9H2C5 316 aa8.25□□□□□ -1.09
LCLAT1-201ENST00000309052 VCX3BQ9H321 246 aa8.25□□□□□ -1.09
LCLAT1-201ENST00000309052 EXD2Q9NVH0 621 aa8.25□□□□□ -1.09
LCLAT1-201ENST00000309052 RUVBL1Q9Y265 456 aaKnown RBP8.25□□□□□ -1.09
LCLAT1-201ENST00000309052 ZNF451Q9Y4E5 1061 aa8.25□□□□□ -1.09
LCLAT1-201ENST00000309052 COLEC10Q9Y6Z7 277 aa8.25□□□□□ -1.09
LCLAT1-201ENST00000309052 COL4A3Q01955 1670 aa8.25□□□□□ -1.09
LCLAT1-201ENST00000309052 KRBA1A5PL33 1030 aa8.25□□□□□ -1.09
LCLAT1-201ENST00000309052 KIF1CO43896 1103 aaKnown RBP8.25□□□□□ -1.09
LCLAT1-201ENST00000309052 NOBOXO60393 691 aa8.25□□□□□ -1.09
LCLAT1-201ENST00000309052 PAPLNO95428 1278 aa8.25□□□□□ -1.09
LCLAT1-201ENST00000309052 ENO2P09104 434 aaPredicted RBP8.25□□□□□ -1.09
LCLAT1-201ENST00000309052 SRFP11831 508 aa8.25□□□□□ -1.09
LCLAT1-201ENST00000309052 POU1F1P28069 291 aa8.25□□□□□ -1.09
LCLAT1-201ENST00000309052 EIF2DP41214 584 aaKnown RBP8.25□□□□□ -1.09
LCLAT1-201ENST00000309052 MAPK10P53779 464 aa8.25□□□□□ -1.09
LCLAT1-201ENST00000309052 VSX2P58304 361 aaPredicted RBP8.25□□□□□ -1.09
LCLAT1-201ENST00000309052 CBLBQ13191 982 aa8.25□□□□□ -1.09
LCLAT1-201ENST00000309052 MED21Q13503 144 aa8.25□□□□□ -1.09
LCLAT1-201ENST00000309052 ERV3-1Q14264 604 aa8.25□□□□□ -1.09
LCLAT1-201ENST00000309052 SFT2D3Q587I9 215 aa8.25□□□□□ -1.09
LCLAT1-201ENST00000309052 GALNT5Q7Z7M9 940 aa8.25□□□□□ -1.09
LCLAT1-201ENST00000309052 KBTBD2Q8IY47 623 aa8.25□□□□□ -1.09
LCLAT1-201ENST00000309052 VANGL1Q8TAA9 524 aaPredicted RBP8.25□□□□□ -1.09
LCLAT1-201ENST00000309052 TGM7Q96PF1 710 aa8.25□□□□□ -1.09
LCLAT1-201ENST00000309052 VPS35Q96QK1 796 aa8.25□□□□□ -1.09
LCLAT1-201ENST00000309052 EFCAB11Q9BUY7 163 aa8.25□□□□□ -1.09
LCLAT1-201ENST00000309052 KLHL31Q9H511 634 aa8.25□□□□□ -1.09
LCLAT1-201ENST00000309052 ACTL8Q9H568 366 aa8.25□□□□□ -1.09
LCLAT1-201ENST00000309052 TRPS1Q9UHF7 1281 aa8.25□□□□□ -1.09
LCLAT1-201ENST00000309052 PRPF19Q9UMS4 504 aaKnown RBP8.25□□□□□ -1.09
LCLAT1-201ENST00000309052 FAF1Q9UNN5 650 aaPredicted RBP8.25□□□□□ -1.09
LCLAT1-201ENST00000309052 GABRR3A8MPY1 467 aa8.24□□□□□ -1.09
LCLAT1-201ENST00000309052 FKBP6O75344 327 aa8.24□□□□□ -1.09
LCLAT1-201ENST00000309052 PGM3O95394 542 aa8.24□□□□□ -1.09
LCLAT1-201ENST00000309052 HHEXQ03014 270 aa8.24□□□□□ -1.09
LCLAT1-201ENST00000309052 TMEM154Q6P9G4 183 aa8.24□□□□□ -1.09
LCLAT1-201ENST00000309052 EHD1Q9H4M9 534 aa8.24□□□□□ -1.09
LCLAT1-201ENST00000309052 SMOXQ9NWM0 555 aa8.24□□□□□ -1.09
LCLAT1-201ENST00000309052 PPT2Q9UMR5 302 aa8.24□□□□□ -1.09
LCLAT1-201ENST00000309052 TNFP01375 233 aa8.24□□□□□ -1.09
LCLAT1-201ENST00000309052 HPCAL1P37235 193 aa8.24□□□□□ -1.09
LCLAT1-201ENST00000309052 PHC1P78364 1004 aa8.24□□□□□ -1.09
LCLAT1-201ENST00000309052 MRPS21P82921 87 aaKnown RBP8.24□□□□□ -1.09
LCLAT1-201ENST00000309052 SMAD4Q13485 552 aaKnown RBP8.24□□□□□ -1.09
LCLAT1-201ENST00000309052 FAAH2Q6GMR7 532 aa8.24□□□□□ -1.09
LCLAT1-201ENST00000309052 KIAA1161Q6NSJ0 714 aa8.24□□□□□ -1.09
LCLAT1-201ENST00000309052 CEP68Q76N32 757 aa8.24□□□□□ -1.09
LCLAT1-201ENST00000309052 VTCN1Q7Z7D3 282 aa8.24□□□□□ -1.09
LCLAT1-201ENST00000309052 ZBTB46Q86UZ6 589 aa8.24□□□□□ -1.09
LCLAT1-201ENST00000309052 PARP8Q8N3A8 854 aa8.24□□□□□ -1.09
LCLAT1-201ENST00000309052 CBR4Q8N4T8 237 aa8.24□□□□□ -1.09
LCLAT1-201ENST00000309052 TP53I13Q8NBR0 393 aaPredicted RBP8.24□□□□□ -1.09
LCLAT1-201ENST00000309052 SLC37A2Q8TED4 501 aa8.24□□□□□ -1.09
LCLAT1-201ENST00000309052 RSC1A1Q92681 617 aa8.24□□□□□ -1.09
LCLAT1-201ENST00000309052 KAT2AQ92830 837 aa8.24□□□□□ -1.09
LCLAT1-201ENST00000309052 DNAJA3Q96EY1 480 aa8.24□□□□□ -1.09
LCLAT1-201ENST00000309052 ZNF184Q99676 751 aaPredicted RBP8.24□□□□□ -1.09
LCLAT1-201ENST00000309052 KLHL4Q9C0H6 718 aa8.24□□□□□ -1.09
LCLAT1-201ENST00000309052 CCDC90BQ9GZT6 254 aa8.24□□□□□ -1.09
LCLAT1-201ENST00000309052 UTS2RQ9UKP6 389 aa8.24□□□□□ -1.09
LCLAT1-201ENST00000309052 ACSL5Q9ULC5 683 aa8.24□□□□□ -1.09
LCLAT1-201ENST00000309052 A8MUA0 341 aa8.24□□□□□ -1.09
LCLAT1-201ENST00000309052 ARNTLO00327 626 aa8.24□□□□□ -1.09
LCLAT1-201ENST00000309052 SERPINA1P01009 418 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms