RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 LCN8Q6JVE9 175 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 KRT80Q6KB66 452 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 FAM72DQ6L9T8 149 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 NEPROQ6NW34 567 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 IYDQ6PHW0 289 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 IL27RAQ6UWB1 636 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 RANBP10Q6VN20 620 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 ZBTB49Q6ZSB9 765 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 LARP4Q71RC2 724 aaKnown RBP eCLIP4.75□□□□□ -1.656e-9■■■□□ 18.1
CKS1B-201ENST00000308987 EFL1Q7Z2Z2 1120 aaKnown RBP4.75□□□□□ -1.65
CKS1B-201ENST00000308987 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.75□□□□□ -1.65
CKS1B-201ENST00000308987 FAM72BQ86X60 149 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 ZNF354CQ86Y25 554 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 CLYBLQ8N0X4 340 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 BBS5Q8N3I7 341 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 CPXM2Q8N436 756 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 NPWQ8N729 165 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 CCNYL1Q8N7R7 359 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 PAPD5Q8NDF8 572 aaKnown RBP4.75□□□□□ -1.65
CKS1B-201ENST00000308987 RHEBL1Q8TAI7 183 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 SAP25Q8TEE9 199 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 HEXDCQ8WVB3 486 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 TFAP2CQ92754 450 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 POP5Q969H6 163 aaKnown RBP4.75□□□□□ -1.65
CKS1B-201ENST00000308987 IGSF8Q969P0 613 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 ATP6V1E2Q96A05 226 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 NXNL1Q96CM4 212 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 KLHL32Q96NJ5 620 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 DOK1Q99704 481 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 CCT7Q99832 543 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 TUBA1CQ9BQE3 449 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 GPATCH1Q9BRR8 931 aaKnown RBP4.75□□□□□ -1.65
CKS1B-201ENST00000308987 C9orf16Q9BUW7 83 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 CIPCQ9C0C6 399 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 SLC25A51Q9H1U9 297 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 CATSPERBQ9H7T0 1116 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 COQ10BQ9H8M1 238 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 PLGRKTQ9HBL7 147 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 PALMDQ9NP74 551 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 PFDN4Q9NQP4 134 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 OLAHQ9NV23 265 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 PIH1D1Q9NWS0 290 aaKnown RBP4.75□□□□□ -1.65
CKS1B-201ENST00000308987 GID8Q9NWU2 228 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 DDIT4Q9NX09 232 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 CHCHD3Q9NX63 227 aaKnown RBP4.75□□□□□ -1.65
CKS1B-201ENST00000308987 ARHGEF38Q9NXL2 777 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 GALNT8Q9NY28 637 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 ADA2Q9NZK5 511 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 ACTR3BQ9P1U1 418 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 OR12D3Q9UGF7 316 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 FBXO5Q9UKT4 447 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 TRAF6Q9Y4K3 522 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 RP1L1Q8IWN7 2480 aaPredicted RBP4.75□□□□□ -1.65
CKS1B-201ENST00000308987 LRP4O75096 1905 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 UNC79Q9P2D8 2635 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 LRBAP50851 2863 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 CELSR2Q9HCU4 2923 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 ICE1Q9Y2F5 2266 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 A0A0J9YVX5 310 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 A0A1W2PNU3 283 aaPredicted RBP4.74□□□□□ -1.65
CKS1B-201ENST00000308987 SLC12A8A0AV02 714 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 SH3PXD2BA1X283 911 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 PRORSD1PA6NEY8 169 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 CCDC160A6NGH7 325 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 YJEFN3A6XGL0 299 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 A8MT66 165 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 KCNU1A8MYU2 1149 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 F5H423 210 aaPredicted RBP4.74□□□□□ -1.65
CKS1B-201ENST00000308987 H3BSA7 217 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 FBP2O00757 339 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 NPC1O15118 1278 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 CASC3O15234 703 aaKnown RBP4.74□□□□□ -1.65
CKS1B-201ENST00000308987 MSI1O43347 362 aaKnown RBP4.74□□□□□ -1.65
CKS1B-201ENST00000308987 AKAP10O43572 662 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 BRINP1O60477 761 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 SYNCRIPO60506 623 aaKnown RBP4.74□□□□□ -1.65
CKS1B-201ENST00000308987 SNAP91O60641 907 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 RAMP2O60895 175 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 USP12O75317 370 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 DNAJB5O75953 348 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 ATP6V1B1P15313 513 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 CR2P20023 1033 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 MAKP20794 623 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 GPX3P22352 226 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 FASP25445 335 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 CD27P26842 260 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 SLC6A4P31645 630 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 SLC1A2P43004 574 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 RANBP1P43487 201 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 ERFP50548 548 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 CCT8P50990 548 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 SUOXP51687 545 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 EEFSECP57772 596 aaKnown RBP4.74□□□□□ -1.65
CKS1B-201ENST00000308987 TLE3Q04726 772 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 ACVR1Q04771 509 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 MYBPC3Q14896 1274 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 EIF4HQ15056 248 aaKnown RBP4.74□□□□□ -1.65
CKS1B-201ENST00000308987 FXNQ16595 210 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 FNDC3BQ53EP0 1204 aaKnown RBP4.74□□□□□ -1.65
CKS1B-201ENST00000308987 C6orf10Q5SRN2 563 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms