RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 NSG1A0A0A6YYJ2 146 aa18.72■□□□□ 0.59
PDZRN3-202ENST00000308537 ESYT3A0FGR9 886 aa18.72■□□□□ 0.59
PDZRN3-202ENST00000308537 PCDH17O14917 1159 aa18.72■□□□□ 0.59
PDZRN3-202ENST00000308537 OR1F1O43749 312 aa18.72■□□□□ 0.59
PDZRN3-202ENST00000308537 GALR3O60755 368 aaPredicted RBP18.72■□□□□ 0.59
PDZRN3-202ENST00000308537 FAM155BO75949 473 aa18.72■□□□□ 0.59
PDZRN3-202ENST00000308537 TBX6O95947 436 aaPredicted RBP18.72■□□□□ 0.59
PDZRN3-202ENST00000308537 SERPINA7P05543 415 aa18.72■□□□□ 0.59
PDZRN3-202ENST00000308537 HEXBP07686 556 aa18.72■□□□□ 0.59
PDZRN3-202ENST00000308537 SMIM10L1P0DMW3 83 aa18.72■□□□□ 0.59
PDZRN3-202ENST00000308537 CD1DP15813 335 aa18.72■□□□□ 0.59
PDZRN3-202ENST00000308537 GRK3P35626 688 aa18.72■□□□□ 0.59
PDZRN3-202ENST00000308537 MAGEA4P43358 317 aa18.72■□□□□ 0.59
PDZRN3-202ENST00000308537 XCR1P46094 333 aa18.72■□□□□ 0.59
PDZRN3-202ENST00000308537 TGFBIQ15582 683 aa18.72■□□□□ 0.59
PDZRN3-202ENST00000308537 OR4D1Q15615 310 aa18.72■□□□□ 0.59
PDZRN3-202ENST00000308537 KBTBD12Q3ZCT8 623 aa18.72■□□□□ 0.59
PDZRN3-202ENST00000308537 UBAP2Q5T6F2 1119 aaKnown RBP18.72■□□□□ 0.59
PDZRN3-202ENST00000308537 NXPE4Q6UWF7 544 aa18.72■□□□□ 0.59
PDZRN3-202ENST00000308537 IQCKQ8N0W5 287 aa18.72■□□□□ 0.59
PDZRN3-202ENST00000308537 ZADH2Q8N4Q0 377 aa18.72■□□□□ 0.59
PDZRN3-202ENST00000308537 CREB3L4Q8TEY5 395 aa18.72■□□□□ 0.59
PDZRN3-202ENST00000308537 SMIM10Q96HG1 83 aa18.72■□□□□ 0.59
PDZRN3-202ENST00000308537 SLC6A16Q9GZN6 736 aa18.72■□□□□ 0.59
PDZRN3-202ENST00000308537 RAB17Q9H0T7 212 aa18.72■□□□□ 0.59
PDZRN3-202ENST00000308537 CTNNAL1Q9UBT7 734 aa18.72■□□□□ 0.59
PDZRN3-202ENST00000308537 ZFP69BQ9UJL9 534 aa18.72■□□□□ 0.59
PDZRN3-202ENST00000308537 ZNF860A6NHJ4 632 aa18.71■□□□□ 0.59
PDZRN3-202ENST00000308537 NDUFS4O43181 175 aa18.71■□□□□ 0.59
PDZRN3-202ENST00000308537 CYC1P08574 325 aa18.71■□□□□ 0.59
PDZRN3-202ENST00000308537 SLC35G6P0C7Q6 338 aa18.71■□□□□ 0.59
PDZRN3-202ENST00000308537 VARSP26640 1264 aaKnown RBP18.71■□□□□ 0.59
PDZRN3-202ENST00000308537 AHRP35869 848 aa18.71■□□□□ 0.59
PDZRN3-202ENST00000308537 GGT5P36269 586 aa18.71■□□□□ 0.59
PDZRN3-202ENST00000308537 KCNC1P48547 511 aa18.71■□□□□ 0.59
PDZRN3-202ENST00000308537 HNMTP50135 292 aa18.71■□□□□ 0.59
PDZRN3-202ENST00000308537 SLC7A5Q01650 507 aa18.71■□□□□ 0.59
PDZRN3-202ENST00000308537 RHAGQ02094 409 aa18.71■□□□□ 0.59
PDZRN3-202ENST00000308537 CAV1Q03135 178 aa18.71■□□□□ 0.59
PDZRN3-202ENST00000308537 ILF2Q12905 390 aaKnown RBP18.71■□□□□ 0.59
PDZRN3-202ENST00000308537 DLG1Q12959 904 aa18.71■□□□□ 0.59
PDZRN3-202ENST00000308537 MFAP5Q13361 173 aa18.71■□□□□ 0.59
PDZRN3-202ENST00000308537 CSHL1Q14406 222 aa18.71■□□□□ 0.59
PDZRN3-202ENST00000308537 EFTUD2Q15029 972 aaKnown RBP eCLIP18.71■□□□□ 0.59
PDZRN3-202ENST00000308537 ISLR2Q6UXK2 745 aa18.71■□□□□ 0.59
PDZRN3-202ENST00000308537 SLCO4C1Q6ZQN7 724 aa18.71■□□□□ 0.59
PDZRN3-202ENST00000308537 TMPRSS11BQ86T26 416 aa18.71■□□□□ 0.59
PDZRN3-202ENST00000308537 KBTBD2Q8IY47 623 aa18.71■□□□□ 0.59
PDZRN3-202ENST00000308537 FAM26EQ8N5C1 309 aa18.71■□□□□ 0.59
PDZRN3-202ENST00000308537 CISD2Q8N5K1 135 aaKnown RBP18.71■□□□□ 0.59
PDZRN3-202ENST00000308537 EFCAB3Q8N7B9 438 aa18.71■□□□□ 0.59
PDZRN3-202ENST00000308537 BRIX1Q8TDN6 353 aaKnown RBP18.71■□□□□ 0.59
PDZRN3-202ENST00000308537 UTP15Q8TED0 518 aaKnown RBP18.71■□□□□ 0.59
PDZRN3-202ENST00000308537 TM9SF4Q92544 642 aa18.71■□□□□ 0.59
PDZRN3-202ENST00000308537 CDKL2Q92772 493 aa18.71■□□□□ 0.59
PDZRN3-202ENST00000308537 VPS50Q96JG6 964 aa18.71■□□□□ 0.59
PDZRN3-202ENST00000308537 CYTH2Q99418 400 aa18.71■□□□□ 0.59
PDZRN3-202ENST00000308537 LRRC1Q9BTT6 524 aa18.71■□□□□ 0.59
PDZRN3-202ENST00000308537 ANKHQ9HCJ1 492 aa18.71■□□□□ 0.59
PDZRN3-202ENST00000308537 RIC8BQ9NVN3 520 aa18.71■□□□□ 0.59
PDZRN3-202ENST00000308537 COPG2Q9UBF2 871 aa18.71■□□□□ 0.59
PDZRN3-202ENST00000308537 IGHV3-20A0A0C4DH32 117 aa18.7■□□□□ 0.58
PDZRN3-202ENST00000308537 HMX2A2RU54 273 aa18.7■□□□□ 0.58
PDZRN3-202ENST00000308537 VPS4BO75351 444 aa18.7■□□□□ 0.58
PDZRN3-202ENST00000308537 CCDC166P0CW27 439 aa18.7■□□□□ 0.58
PDZRN3-202ENST00000308537 RNF224P0DH78 156 aa18.7■□□□□ 0.58
PDZRN3-202ENST00000308537 C8orf89P0DMQ9 161 aa18.7■□□□□ 0.58
PDZRN3-202ENST00000308537 ITGAMP11215 1152 aa18.7■□□□□ 0.58
PDZRN3-202ENST00000308537 ALOX12P18054 663 aa18.7■□□□□ 0.58
PDZRN3-202ENST00000308537 MRPL49Q13405 166 aaKnown RBP18.7■□□□□ 0.58
PDZRN3-202ENST00000308537 USP10Q14694 798 aaKnown RBP18.7■□□□□ 0.58
PDZRN3-202ENST00000308537 FBF1Q8TES7 1133 aa18.7■□□□□ 0.58
PDZRN3-202ENST00000308537 C16orf45Q96MC5 204 aaPredicted RBP18.7■□□□□ 0.58
PDZRN3-202ENST00000308537 LMF1Q96S06 567 aa18.7■□□□□ 0.58
PDZRN3-202ENST00000308537 KLHL31Q9H511 634 aa18.7■□□□□ 0.58
PDZRN3-202ENST00000308537 VPS4AQ9UN37 437 aa18.7■□□□□ 0.58
PDZRN3-202ENST00000308537 ASB1Q9Y576 335 aa18.7■□□□□ 0.58
PDZRN3-202ENST00000308537 KCNE2Q9Y6J6 123 aa18.7■□□□□ 0.58
PDZRN3-202ENST00000308537 CBX6O95503 412 aa18.69■□□□□ 0.58
PDZRN3-202ENST00000308537 SLC35E2BP0CK96 405 aa18.69■□□□□ 0.58
PDZRN3-202ENST00000308537 EPORP19235 508 aa18.69■□□□□ 0.58
PDZRN3-202ENST00000308537 CXCR2P25025 360 aa18.69■□□□□ 0.58
PDZRN3-202ENST00000308537 HERC3Q15034 1050 aa18.69■□□□□ 0.58
PDZRN3-202ENST00000308537 DEFB134Q4QY38 66 aa18.69■□□□□ 0.58
PDZRN3-202ENST00000308537 FBXO48Q5FWF7 155 aa18.69■□□□□ 0.58
PDZRN3-202ENST00000308537 B3GNTL1Q67FW5 361 aaPredicted RBP18.69■□□□□ 0.58
PDZRN3-202ENST00000308537 LINC00696Q6ZRV3 163 aa18.69■□□□□ 0.58
PDZRN3-202ENST00000308537 RIPOR1Q6ZS17 1223 aa18.69■□□□□ 0.58
PDZRN3-202ENST00000308537 VN1R5Q7Z5H4 357 aa18.69■□□□□ 0.58
PDZRN3-202ENST00000308537 ANKRD37Q7Z713 158 aa18.69■□□□□ 0.58
PDZRN3-202ENST00000308537 CMC1Q7Z7K0 106 aa18.69■□□□□ 0.58
PDZRN3-202ENST00000308537 PLPP5Q8NEB5 264 aa18.69■□□□□ 0.58
PDZRN3-202ENST00000308537 CATSPER1Q8NEC5 780 aa18.69■□□□□ 0.58
PDZRN3-202ENST00000308537 EGFL8Q99944 293 aa18.69■□□□□ 0.58
PDZRN3-202ENST00000308537 ILKAPQ9H0C8 392 aaPredicted RBP18.69■□□□□ 0.58
PDZRN3-202ENST00000308537 PABPN1LA6NDY0 278 aaKnown RBP18.68■□□□□ 0.58
PDZRN3-202ENST00000308537 ZNF888P0CJ79 500 aaPredicted RBP18.68■□□□□ 0.58
PDZRN3-202ENST00000308537 STMN1P16949 149 aa18.68■□□□□ 0.58
PDZRN3-202ENST00000308537 TSFMP43897 325 aaKnown RBP18.68■□□□□ 0.58
PDZRN3-202ENST00000308537 RAB10P61026 200 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms