RNA–Protein interactions for RNA: ENST00000306324.3

HOXD4-201, Transcript of homeobox D4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD4, Length 1,464 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4-201ENST00000306324 MLXIPLQ9NP71 852 aa21.27■■□□□ 1
HOXD4-201ENST00000306324 LHX9Q9NQ69 397 aa21.27■■□□□ 1
HOXD4-201ENST00000306324 RAXQ9Y2V3 346 aa21.27■■□□□ 1
HOXD4-201ENST00000306324 PCDHGA11Q9Y5H2 935 aa21.27■■□□□ 1
HOXD4-201ENST00000306324 ZFHX4Q86UP3 3567 aa21.27■■□□□ 1
HOXD4-201ENST00000306324 BPGMP07738 259 aa21.26■□□□□ 0.99
HOXD4-201ENST00000306324 GSTM2P28161 218 aa21.26■□□□□ 0.99
HOXD4-201ENST00000306324 SERPINB4P48594 390 aa21.26■□□□□ 0.99
HOXD4-201ENST00000306324 EMP3P54852 163 aa21.26■□□□□ 0.99
HOXD4-201ENST00000306324 NAA20P61599 178 aa21.26■□□□□ 0.99
HOXD4-201ENST00000306324 ABHD18Q0P651 414 aa21.26■□□□□ 0.99
HOXD4-201ENST00000306324 CLN3Q13286 438 aa21.26■□□□□ 0.99
HOXD4-201ENST00000306324 DDX39BQ13838 428 aaKnown RBP21.26■□□□□ 0.99
HOXD4-201ENST00000306324 GARNL3Q5VVW2 1013 aa21.26■□□□□ 0.99
HOXD4-201ENST00000306324 LETMD1Q6P1Q0 360 aa21.26■□□□□ 0.99
HOXD4-201ENST00000306324 FRMD7Q6ZUT3 714 aa21.26■□□□□ 0.99
HOXD4-201ENST00000306324 PROSER1Q86XN7 944 aa21.26■□□□□ 0.99
HOXD4-201ENST00000306324 LAS2Q8IYD9 372 aa21.26■□□□□ 0.99
HOXD4-201ENST00000306324 NT5CQ8TCD5 201 aa21.26■□□□□ 0.99
HOXD4-201ENST00000306324 CREB3L4Q8TEY5 395 aa21.26■□□□□ 0.99
HOXD4-201ENST00000306324 PKNOX2Q96KN3 472 aa21.26■□□□□ 0.99
HOXD4-201ENST00000306324 GBP5Q96PP8 586 aa21.26■□□□□ 0.99
HOXD4-201ENST00000306324 PAIP2Q9BPZ3 127 aaKnown RBP21.26■□□□□ 0.99
HOXD4-201ENST00000306324 GATA5Q9BWX5 397 aaPredicted RBP21.26■□□□□ 0.99
HOXD4-201ENST00000306324 RHBGQ9H310 441 aa21.26■□□□□ 0.99
HOXD4-201ENST00000306324 MRPS2Q9Y399 296 aaKnown RBP21.26■□□□□ 0.99
HOXD4-201ENST00000306324 SCN2AQ99250 2005 aa21.26■□□□□ 0.99
HOXD4-201ENST00000306324 WDR91A4D1P6 747 aa21.26■□□□□ 0.99
HOXD4-201ENST00000306324 FFAR3O14843 346 aa21.26■□□□□ 0.99
HOXD4-201ENST00000306324 GPR42O15529 346 aa21.26■□□□□ 0.99
HOXD4-201ENST00000306324 OR4F21O95013 312 aa21.26■□□□□ 0.99
HOXD4-201ENST00000306324 AGXTP21549 392 aa21.26■□□□□ 0.99
HOXD4-201ENST00000306324 EIF2S3P41091 472 aaKnown RBP21.26■□□□□ 0.99
HOXD4-201ENST00000306324 CCR10P46092 362 aa21.26■□□□□ 0.99
HOXD4-201ENST00000306324 ZRSR2Q15696 482 aaKnown RBP21.26■□□□□ 0.99
HOXD4-201ENST00000306324 MANEAQ5SRI9 462 aa21.26■□□□□ 0.99
HOXD4-201ENST00000306324 TTC19Q6DKK2 380 aaPredicted RBP21.26■□□□□ 0.99
HOXD4-201ENST00000306324 TMEM214Q6NUQ4 689 aaKnown RBP21.26■□□□□ 0.99
HOXD4-201ENST00000306324 GPRIN3Q6ZVF9 776 aa21.26■□□□□ 0.99
HOXD4-201ENST00000306324 NUDCD3Q8IVD9 361 aa21.26■□□□□ 0.99
HOXD4-201ENST00000306324 REPS1Q96D71 796 aa21.26■□□□□ 0.99
HOXD4-201ENST00000306324 SEC16BQ96JE7 1060 aa21.26■□□□□ 0.99
HOXD4-201ENST00000306324 ZNF382Q96SR6 550 aa21.26■□□□□ 0.99
HOXD4-201ENST00000306324 STK38LQ9Y2H1 464 aa21.26■□□□□ 0.99
HOXD4-201ENST00000306324 MAP1BP46821 2468 aaKnown RBP21.25■□□□□ 0.99
HOXD4-201ENST00000306324 H0YIV9 168 aa21.25■□□□□ 0.99
HOXD4-201ENST00000306324 RRP8O43159 456 aaKnown RBP21.25■□□□□ 0.99
HOXD4-201ENST00000306324 KLK10O43240 276 aa21.25■□□□□ 0.99
HOXD4-201ENST00000306324 CLEC3AO75596 197 aa21.25■□□□□ 0.99
HOXD4-201ENST00000306324 SERPINA6P08185 405 aa21.25■□□□□ 0.99
HOXD4-201ENST00000306324 HPDP32754 393 aaPredicted RBP21.25■□□□□ 0.99
HOXD4-201ENST00000306324 STAT5AP42229 794 aa21.25■□□□□ 0.99
HOXD4-201ENST00000306324 SLC9A5Q14940 896 aa21.25■□□□□ 0.99
HOXD4-201ENST00000306324 TOR1AIP1Q5JTV8 583 aa21.25■□□□□ 0.99
HOXD4-201ENST00000306324 HHATQ5VTY9 493 aa21.25■□□□□ 0.99
HOXD4-201ENST00000306324 ZNF385CQ66K41 422 aaPredicted RBP21.25■□□□□ 0.99
HOXD4-201ENST00000306324 LCN10Q6JVE6 187 aa21.25■□□□□ 0.99
HOXD4-201ENST00000306324 ZCCHC23Q6ZST2 131 aa21.25■□□□□ 0.99
HOXD4-201ENST00000306324 VN1R5Q7Z5H4 357 aa21.25■□□□□ 0.99
HOXD4-201ENST00000306324 SYVN1Q86TM6 617 aa21.25■□□□□ 0.99
HOXD4-201ENST00000306324 ARHGEF39Q8N4T4 335 aa21.25■□□□□ 0.99
HOXD4-201ENST00000306324 MGARPQ8TDB4 240 aa21.25■□□□□ 0.99
HOXD4-201ENST00000306324 MAGEB10Q96LZ2 347 aaPredicted RBP21.25■□□□□ 0.99
HOXD4-201ENST00000306324 DPH2Q9BQC3 489 aaPredicted RBP21.25■□□□□ 0.99
HOXD4-201ENST00000306324 SLC6A16Q9GZN6 736 aa21.25■□□□□ 0.99
HOXD4-201ENST00000306324 CHST8Q9H2A9 424 aa21.25■□□□□ 0.99
HOXD4-201ENST00000306324 MID1IP1Q9NPA3 183 aa21.25■□□□□ 0.99
HOXD4-201ENST00000306324 ZNF225Q9UK10 706 aa21.25■□□□□ 0.99
HOXD4-201ENST00000306324 MAU2Q9Y6X3 613 aa21.25■□□□□ 0.99
HOXD4-201ENST00000306324 A0A0A6YYC8 382 aaPredicted RBP21.24■□□□□ 0.99
HOXD4-201ENST00000306324 URADA6NGE7 173 aa21.24■□□□□ 0.99
HOXD4-201ENST00000306324 I3L1I5 382 aaPredicted RBP21.24■□□□□ 0.99
HOXD4-201ENST00000306324 TAF4O00268 1085 aa21.24■□□□□ 0.99
HOXD4-201ENST00000306324 IL1RNP18510 177 aa21.24■□□□□ 0.99
HOXD4-201ENST00000306324 OR1D4P47884 311 aa21.24■□□□□ 0.99
HOXD4-201ENST00000306324 PKNOX1P55347 436 aa21.24■□□□□ 0.99
HOXD4-201ENST00000306324 SNRPNP63162 240 aaKnown RBP21.24■□□□□ 0.99
HOXD4-201ENST00000306324 DCDP81605 110 aaKnown RBP21.24■□□□□ 0.99
HOXD4-201ENST00000306324 HYAL2Q12891 473 aa21.24■□□□□ 0.99
HOXD4-201ENST00000306324 FAM53BQ14153 422 aa21.24■□□□□ 0.99
HOXD4-201ENST00000306324 GGTA1PQ4G0N0 100 aa21.24■□□□□ 0.99
HOXD4-201ENST00000306324 VASH2Q86V25 355 aa21.24■□□□□ 0.99
HOXD4-201ENST00000306324 RNF175Q8N4F7 328 aa21.24■□□□□ 0.99
HOXD4-201ENST00000306324 CDYL2Q8N8U2 506 aa21.24■□□□□ 0.99
HOXD4-201ENST00000306324 HUS1BQ8NHY5 278 aa21.24■□□□□ 0.99
HOXD4-201ENST00000306324 PPP1R14CQ8TAE6 165 aa21.24■□□□□ 0.99
HOXD4-201ENST00000306324 ZNF473Q8WTR7 871 aaKnown RBP21.24■□□□□ 0.99
HOXD4-201ENST00000306324 ZDHHC19Q8WVZ1 309 aaPredicted RBP21.24■□□□□ 0.99
HOXD4-201ENST00000306324 MTFMTQ96DP5 389 aaKnown RBP21.24■□□□□ 0.99
HOXD4-201ENST00000306324 MTERF1Q99551 399 aaKnown RBP21.24■□□□□ 0.99
HOXD4-201ENST00000306324 DPH1Q9BZG8 443 aa21.24■□□□□ 0.99
HOXD4-201ENST00000306324 SHCBP1LQ9BZQ2 653 aa21.24■□□□□ 0.99
HOXD4-201ENST00000306324 KLHL31Q9H511 634 aa21.24■□□□□ 0.99
HOXD4-201ENST00000306324 NKIRAS1Q9NYS0 192 aa21.24■□□□□ 0.99
HOXD4-201ENST00000306324 TRPS1Q9UHF7 1281 aa21.24■□□□□ 0.99
HOXD4-201ENST00000306324 CROTQ9UKG9 612 aa21.24■□□□□ 0.99
HOXD4-201ENST00000306324 CFAP47Q6ZTR5 3102 aa21.23■□□□□ 0.99
HOXD4-201ENST00000306324 LOC101059948A0A1B0GTJ6 334 aa21.23■□□□□ 0.99
HOXD4-201ENST00000306324 HMGB1P1B2RPK0 211 aaPredicted RBP21.23■□□□□ 0.99
HOXD4-201ENST00000306324 SH3BGRLO75368 114 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms