RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 ENPP6Q6UWR7 440 aa10.54□□□□□ -0.72
LSM3-201ENST00000306024 SPATA19Q7Z5L4 167 aa10.54□□□□□ -0.72
LSM3-201ENST00000306024 MILR1Q7Z6M3 343 aa10.54□□□□□ -0.72
LSM3-201ENST00000306024 LDB1Q86U70 411 aaPredicted RBP10.54□□□□□ -0.72
LSM3-201ENST00000306024 DTWD1Q8N5C7 304 aa10.54□□□□□ -0.72
LSM3-201ENST00000306024 MRGPRX2Q96LB1 330 aa10.54□□□□□ -0.72
LSM3-201ENST00000306024 CNPPD1Q9BV87 410 aa10.54□□□□□ -0.72
LSM3-201ENST00000306024 AMBRA1Q9C0C7 1298 aa10.54□□□□□ -0.72
LSM3-201ENST00000306024 ACOT13Q9NPJ3 140 aa10.54□□□□□ -0.72
LSM3-201ENST00000306024 CASS4Q9NQ75 786 aa10.54□□□□□ -0.72
LSM3-201ENST00000306024 GLTPQ9NZD2 209 aa10.54□□□□□ -0.72
LSM3-201ENST00000306024 FBXL21Q9UKT6 434 aa10.54□□□□□ -0.72
LSM3-201ENST00000306024 TRIM64A6NGJ6 449 aa10.54□□□□□ -0.72
LSM3-201ENST00000306024 ITGALP20701 1170 aa10.54□□□□□ -0.72
LSM3-201ENST00000306024 CLCN5P51795 746 aa10.54□□□□□ -0.72
LSM3-201ENST00000306024 OLR1P78380 273 aa10.54□□□□□ -0.72
LSM3-201ENST00000306024 ARF5P84085 180 aa10.54□□□□□ -0.72
LSM3-201ENST00000306024 EIF4EBP2Q13542 120 aaPredicted RBP10.54□□□□□ -0.72
LSM3-201ENST00000306024 SEMA3AQ14563 771 aa10.54□□□□□ -0.72
LSM3-201ENST00000306024 FAM219BQ5XKK7 198 aa10.54□□□□□ -0.72
LSM3-201ENST00000306024 Q6ZNB5 142 aa10.54□□□□□ -0.72
LSM3-201ENST00000306024 IPCEF1Q8WWN9 437 aaPredicted RBP10.54□□□□□ -0.72
LSM3-201ENST00000306024 C17orf62Q9BQA9 187 aa10.54□□□□□ -0.72
LSM3-201ENST00000306024 REEP1Q9H902 201 aa10.54□□□□□ -0.72
LSM3-201ENST00000306024 NTN4Q9HB63 628 aa10.54□□□□□ -0.72
LSM3-201ENST00000306024 SYTL2Q9HCH5 934 aa10.54□□□□□ -0.72
LSM3-201ENST00000306024 SNTG1Q9NSN8 517 aa10.54□□□□□ -0.72
LSM3-201ENST00000306024 CD274Q9NZQ7 290 aa10.54□□□□□ -0.72
LSM3-201ENST00000306024 SLAMF8Q9P0V8 285 aa10.54□□□□□ -0.72
LSM3-201ENST00000306024 ABCD2Q9UBJ2 740 aa10.54□□□□□ -0.72
LSM3-201ENST00000306024 COLQQ9Y215 455 aaPredicted RBP10.54□□□□□ -0.72
LSM3-201ENST00000306024 MYO16Q9Y6X6 1858 aa10.54□□□□□ -0.72
LSM3-201ENST00000306024 MKI67P46013 3256 aaKnown RBP10.53□□□□□ -0.72
LSM3-201ENST00000306024 TEX51A0A1B0GUA7 166 aa10.53□□□□□ -0.72
LSM3-201ENST00000306024 PLOD3O60568 738 aa10.53□□□□□ -0.72
LSM3-201ENST00000306024 PCDH8O95206 1070 aa10.53□□□□□ -0.72
LSM3-201ENST00000306024 SLC2A4P14672 509 aa10.53□□□□□ -0.72
LSM3-201ENST00000306024 TNNI3P19429 210 aa10.53□□□□□ -0.72
LSM3-201ENST00000306024 MAGEA12P43365 314 aa10.53□□□□□ -0.72
LSM3-201ENST00000306024 ARCN1P48444 511 aaKnown RBP10.53□□□□□ -0.72
LSM3-201ENST00000306024 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.53□□□□□ -0.72
LSM3-201ENST00000306024 MAPKAPK3Q16644 382 aa10.53□□□□□ -0.72
LSM3-201ENST00000306024 DPY19L1Q2PZI1 675 aa10.53□□□□□ -0.72
LSM3-201ENST00000306024 HMGCLL1Q8TB92 370 aa10.53□□□□□ -0.72
LSM3-201ENST00000306024 BRSK1Q8TDC3 778 aa10.53□□□□□ -0.72
LSM3-201ENST00000306024 ZNF300Q96RE9 604 aaPredicted RBP10.53□□□□□ -0.72
LSM3-201ENST00000306024 CCDC32Q9BV29 185 aa10.53□□□□□ -0.72
LSM3-201ENST00000306024 DNAJC15Q9Y5T4 150 aa10.53□□□□□ -0.72
LSM3-201ENST00000306024 CXCR6O00574 342 aa10.53□□□□□ -0.72
LSM3-201ENST00000306024 PSIP1O75475 530 aaKnown RBP10.53□□□□□ -0.72
LSM3-201ENST00000306024 SERPINA1P01009 418 aa10.53□□□□□ -0.72
LSM3-201ENST00000306024 DGKQP52824 942 aa10.53□□□□□ -0.72
LSM3-201ENST00000306024 PRKCDQ05655 676 aa10.53□□□□□ -0.72
LSM3-201ENST00000306024 ACAP2Q15057 778 aa10.53□□□□□ -0.72
LSM3-201ENST00000306024 HECTD2Q5U5R9 776 aa10.53□□□□□ -0.72
LSM3-201ENST00000306024 PTRHD1Q6GMV3 140 aaKnown RBP10.53□□□□□ -0.72
LSM3-201ENST00000306024 GPR153Q6NV75 609 aa10.53□□□□□ -0.72
LSM3-201ENST00000306024 XKRXQ6PP77 449 aa10.53□□□□□ -0.72
LSM3-201ENST00000306024 YIPF7Q8N8F6 280 aa10.53□□□□□ -0.72
LSM3-201ENST00000306024 SLC7A6Q92536 515 aa10.53□□□□□ -0.72
LSM3-201ENST00000306024 PEX13Q92968 403 aa10.53□□□□□ -0.72
LSM3-201ENST00000306024 MYADMQ96S97 322 aa10.53□□□□□ -0.72
LSM3-201ENST00000306024 SUV39H2Q9H5I1 410 aa10.53□□□□□ -0.72
LSM3-201ENST00000306024 ERVW-1Q9UQF0 538 aa10.53□□□□□ -0.72
LSM3-201ENST00000306024 TRIM64BA6NI03 449 aa10.53□□□□□ -0.72
LSM3-201ENST00000306024 GJB3O75712 270 aa10.53□□□□□ -0.72
LSM3-201ENST00000306024 RHOBTB1O94844 696 aa10.53□□□□□ -0.72
LSM3-201ENST00000306024 HTR1AP08908 422 aa10.53□□□□□ -0.72
LSM3-201ENST00000306024 LAMP2P13473 410 aa10.53□□□□□ -0.72
LSM3-201ENST00000306024 NUDT1P36639 197 aa10.53□□□□□ -0.72
LSM3-201ENST00000306024 RGRP47804 291 aa10.53□□□□□ -0.72
LSM3-201ENST00000306024 PPM1FP49593 454 aaPredicted RBP10.53□□□□□ -0.72
LSM3-201ENST00000306024 MAB21L1Q13394 359 aa10.53□□□□□ -0.72
LSM3-201ENST00000306024 ANGPT1Q15389 498 aa10.53□□□□□ -0.72
LSM3-201ENST00000306024 SPATS1Q496A3 300 aa10.53□□□□□ -0.72
LSM3-201ENST00000306024 TECRLQ5HYJ1 363 aa10.53□□□□□ -0.72
LSM3-201ENST00000306024 ZNF691Q5VV52 312 aa10.53□□□□□ -0.72
LSM3-201ENST00000306024 B3GNT8Q7Z7M8 397 aa10.53□□□□□ -0.72
LSM3-201ENST00000306024 PLCZ1Q86YW0 608 aa10.53□□□□□ -0.72
LSM3-201ENST00000306024 ZDHHC21Q8IVQ6 265 aa10.53□□□□□ -0.72
LSM3-201ENST00000306024 METTL6Q8TCB7 284 aa10.53□□□□□ -0.72
LSM3-201ENST00000306024 ADAMTS19Q8TE59 1207 aa10.53□□□□□ -0.72
LSM3-201ENST00000306024 MYOCQ99972 504 aa10.53□□□□□ -0.72
LSM3-201ENST00000306024 OR51E2Q9H255 320 aa10.53□□□□□ -0.72
LSM3-201ENST00000306024 MTG2Q9H4K7 406 aa10.53□□□□□ -0.72
LSM3-201ENST00000306024 ZFYVE1Q9HBF4 777 aa10.53□□□□□ -0.72
LSM3-201ENST00000306024 ARL5AQ9Y689 179 aa10.53□□□□□ -0.72
LSM3-201ENST00000306024 FABP12A6NFH5 140 aa10.52□□□□□ -0.72
LSM3-201ENST00000306024 C1QTNF3-AMACRE9PGA6 284 aa10.52□□□□□ -0.72
LSM3-201ENST00000306024 MOSPD3O75425 235 aa10.52□□□□□ -0.72
LSM3-201ENST00000306024 DIRAS1O95057 198 aa10.52□□□□□ -0.72
LSM3-201ENST00000306024 ALPIP09923 528 aa10.52□□□□□ -0.72
LSM3-201ENST00000306024 CYP2A6P11509 494 aaPredicted RBP10.52□□□□□ -0.72
LSM3-201ENST00000306024 DDCP20711 480 aa10.52□□□□□ -0.72
LSM3-201ENST00000306024 CBLP22681 906 aa10.52□□□□□ -0.72
LSM3-201ENST00000306024 POU1F1P28069 291 aa10.52□□□□□ -0.72
LSM3-201ENST00000306024 FAPQ12884 760 aa10.52□□□□□ -0.72
LSM3-201ENST00000306024 ADAM15Q13444 863 aa10.52□□□□□ -0.72
LSM3-201ENST00000306024 ARSIQ5FYB1 569 aa10.52□□□□□ -0.72
LSM3-201ENST00000306024 TOR2AQ5JU69 321 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms