RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 TBX18O95935 607 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 VIPP01282 170 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 GSNP06396 782 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 CSF3P09919 207 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 PIRTP0C851 137 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 POLR2EP19388 210 aaKnown RBP5.24□□□□□ -1.57
VPS50-202ENST00000305866 CYP2A7P20853 494 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 AOAHP28039 575 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 CCND3P30281 292 aaPredicted RBP5.24□□□□□ -1.57
VPS50-202ENST00000305866 MAPK9P45984 424 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 TMED10P49755 219 aaKnown RBP5.24□□□□□ -1.57
VPS50-202ENST00000305866 BNC1Q01954 994 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 CSTF3Q12996 717 aaKnown RBP5.24□□□□□ -1.57
VPS50-202ENST00000305866 NFATC2Q13469 925 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 CAMK2GQ13555 558 aaPredicted RBP5.24□□□□□ -1.57
VPS50-202ENST00000305866 PDE7AQ13946 482 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 CTXN3Q4LDR2 81 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 RTP2Q5QGT7 225 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 PPP2R2DQ66LE6 453 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 PAGE2Q7Z2X7 111 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 ANKRD33Q7Z3H0 272 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 GLT6D1Q7Z4J2 308 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 GALNT5Q7Z7M9 940 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 AKAP14Q86UN6 197 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 ZDHHC21Q8IVQ6 265 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 RBFAQ8N0V3 343 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 FNDC5Q8NAU1 212 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 SLC7A6Q92536 515 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 APIPQ96GX9 242 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 RIPOR3Q96MK2 946 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 TRNT1Q96Q11 434 aaKnown RBP5.24□□□□□ -1.57
VPS50-202ENST00000305866 VPS35Q96QK1 796 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 TTPALQ9BTX7 342 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 B3GAT2Q9NPZ5 323 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 RAD18Q9NS91 495 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 ACER3Q9NUN7 267 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 FKBPLQ9UIM3 349 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 FAM50BQ9Y247 325 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 GPSM3Q9Y4H4 160 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 TRANK1O15050 2925 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 TET1Q8NFU7 2136 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 B4DXG7 233 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 FFAR2O15552 330 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 RGS10O43665 173 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 CHEK2O96017 543 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 GSTM1P09488 218 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 HLA-EP13747 358 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 NAGAP17050 411 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 MC4RP32245 332 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 TNFSF8P32971 234 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 KIR2DL3P43628 341 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 XCR1P46094 333 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 RPS5P46782 204 aaKnown RBP5.24□□□□□ -1.57
VPS50-202ENST00000305866 PUM1Q14671 1186 aaKnown RBP eCLIP5.24□□□□□ -1.57
VPS50-202ENST00000305866 EIF4HQ15056 248 aaKnown RBP5.24□□□□□ -1.57
VPS50-202ENST00000305866 TEAD4Q15561 434 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 VMACQ2NL98 169 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 ATP6AP1LQ52LC2 224 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 ZNF385BQ569K4 471 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 PLEKHS1Q5SXH7 462 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 TPRG1LQ5T0D9 272 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 HECTD3Q5T447 861 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 RFPL4BQ6ZWI9 263 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 ZNF438Q7Z4V0 828 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 TMC8Q8IU68 726 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 C1orf52Q8N6N3 182 aaKnown RBP5.24□□□□□ -1.57
VPS50-202ENST00000305866 DUSP18Q8NEJ0 188 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 FIBINQ8TAL6 211 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 HSD17B8Q92506 261 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 ULK4Q96C45 1275 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 LINGO1Q96FE5 620 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 Q96MT0 163 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 INSM2Q96T92 566 aaPredicted RBP5.24□□□□□ -1.57
VPS50-202ENST00000305866 CINPQ9BW66 212 aaPredicted RBP5.24□□□□□ -1.57
VPS50-202ENST00000305866 ABCB8Q9NUT2 735 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 NDUFB11Q9NX14 153 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 GULP1Q9UBP9 304 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 EIF3KQ9UBQ5 218 aaKnown RBP5.24□□□□□ -1.57
VPS50-202ENST00000305866 BTNL2Q9UIR0 455 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 BOLA1Q9Y3E2 137 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 SAGE2PA6NJ88 616 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 BTN3A1O00481 513 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 TBX1O43435 398 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 RHOBTB1O94844 696 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 SLCO2B1O94956 709 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 DIRAS1O95057 198 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 ZNF682O95780 498 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 C8GP07360 202 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 OR4Q2P0C623 313 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 KCNQ1P51787 676 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 PFN3P60673 137 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 LSM3P62310 102 aaKnown RBP5.23□□□□□ -1.57
VPS50-202ENST00000305866 HMGCS1Q01581 520 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 EFEMP1Q12805 493 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 ZNF235Q14590 738 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 ZNF852Q6ZMS4 543 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 MBOAT1Q6ZNC8 495 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 RNF175Q8N4F7 328 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 TTC29Q8NA56 475 aaPredicted RBP5.23□□□□□ -1.57
VPS50-202ENST00000305866 ASB11Q8WXH4 323 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms