RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 LRIF1Q5T3J3 769 aa14.14□□□□□ -0.15
COL6A2-201ENST00000300527 RNF219Q5W0B1 726 aaPredicted RBP14.14□□□□□ -0.15
COL6A2-201ENST00000300527 FAM180BQ6P0A1 224 aa14.14□□□□□ -0.15
COL6A2-201ENST00000300527 PLET1Q6UQ28 207 aa14.14□□□□□ -0.15
COL6A2-201ENST00000300527 FAM124AQ86V42 546 aa14.14□□□□□ -0.15
COL6A2-201ENST00000300527 STK40Q8N2I9 435 aa14.14□□□□□ -0.15
COL6A2-201ENST00000300527 DEDD2Q8WXF8 326 aa14.14□□□□□ -0.15
COL6A2-201ENST00000300527 PSKH2Q96QS6 385 aa14.14□□□□□ -0.15
COL6A2-201ENST00000300527 PITX2Q99697 317 aa14.14□□□□□ -0.15
COL6A2-201ENST00000300527 ADAM2Q99965 735 aa14.14□□□□□ -0.15
COL6A2-201ENST00000300527 MGME1Q9BQP7 344 aa14.14□□□□□ -0.15
COL6A2-201ENST00000300527 COMMD3Q9UBI1 195 aa14.14□□□□□ -0.15
COL6A2-201ENST00000300527 CFAP20Q9Y6A4 193 aaKnown RBP14.14□□□□□ -0.15
COL6A2-201ENST00000300527 PLK4O00444 970 aa14.14□□□□□ -0.15
COL6A2-201ENST00000300527 CCNB2O95067 398 aa14.14□□□□□ -0.15
COL6A2-201ENST00000300527 CYP17A1P05093 508 aa14.14□□□□□ -0.15
COL6A2-201ENST00000300527 PTPN6P29350 595 aa14.14□□□□□ -0.15
COL6A2-201ENST00000300527 CNR2P34972 360 aa14.14□□□□□ -0.15
COL6A2-201ENST00000300527 PRIM2P49643 509 aa14.14□□□□□ -0.15
COL6A2-201ENST00000300527 CSNK2BP67870 215 aa14.14□□□□□ -0.15
COL6A2-201ENST00000300527 MRPS6P82932 125 aaKnown RBP14.14□□□□□ -0.15
COL6A2-201ENST00000300527 CACNG1Q06432 222 aa14.14□□□□□ -0.15
COL6A2-201ENST00000300527 VEPH1Q14D04 833 aa14.14□□□□□ -0.15
COL6A2-201ENST00000300527 SSX1Q16384 188 aa14.14□□□□□ -0.15
COL6A2-201ENST00000300527 HKDC1Q2TB90 917 aa14.14□□□□□ -0.15
COL6A2-201ENST00000300527 AMIGO1Q86WK6 493 aa14.14□□□□□ -0.15
COL6A2-201ENST00000300527 ZNF557Q8N988 423 aaPredicted RBP14.14□□□□□ -0.15
COL6A2-201ENST00000300527 OR4K1Q8NGD4 311 aa14.14□□□□□ -0.15
COL6A2-201ENST00000300527 C8orf48Q96LL4 319 aa14.14□□□□□ -0.15
COL6A2-201ENST00000300527 FAM129BQ96TA1 746 aa14.14□□□□□ -0.15
COL6A2-201ENST00000300527 POLR2J2Q9GZM3 115 aaKnown RBP14.14□□□□□ -0.15
COL6A2-201ENST00000300527 FBXO44Q9H4M3 255 aa14.14□□□□□ -0.15
COL6A2-201ENST00000300527 TMEM45AQ9NWC5 275 aa14.14□□□□□ -0.15
COL6A2-201ENST00000300527 LTBP4Q8N2S1 1624 aa14.14□□□□□ -0.15
COL6A2-201ENST00000300527 PRRC2BQ5JSZ5 2229 aaKnown RBP14.14□□□□□ -0.15
COL6A2-201ENST00000300527 A0A0G2JMP0 313 aa14.14□□□□□ -0.15
COL6A2-201ENST00000300527 ETFAP13804 333 aa14.14□□□□□ -0.15
COL6A2-201ENST00000300527 PRKACBP22694 351 aa14.14□□□□□ -0.15
COL6A2-201ENST00000300527 RORCP51449 518 aa14.14□□□□□ -0.15
COL6A2-201ENST00000300527 KRT73Q86Y46 540 aa14.14□□□□□ -0.15
COL6A2-201ENST00000300527 NATD1Q8N6N6 113 aa14.14□□□□□ -0.15
COL6A2-201ENST00000300527 AQP11Q8NBQ7 271 aa14.14□□□□□ -0.15
COL6A2-201ENST00000300527 TRMT61AQ96FX7 289 aaKnown RBP14.14□□□□□ -0.15
COL6A2-201ENST00000300527 CCDC120Q96HB5 630 aa14.14□□□□□ -0.15
COL6A2-201ENST00000300527 CLN6Q9NWW5 311 aa14.14□□□□□ -0.15
COL6A2-201ENST00000300527 PCDH10Q9P2E7 1040 aa14.14□□□□□ -0.15
COL6A2-201ENST00000300527 DNMT3LQ9UJW3 386 aa14.14□□□□□ -0.15
COL6A2-201ENST00000300527 RAB23Q9ULC3 237 aa14.14□□□□□ -0.15
COL6A2-201ENST00000300527 OARD1Q9Y530 152 aa14.14□□□□□ -0.15
COL6A2-201ENST00000300527 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.13□□□□□ -0.15
COL6A2-201ENST00000300527 GNG14A0A1W2PPG7 69 aa14.13□□□□□ -0.15
COL6A2-201ENST00000300527 NT5C1B-RDH14C9J2C7 533 aa14.13□□□□□ -0.15
COL6A2-201ENST00000300527 THPOP40225 353 aa14.13□□□□□ -0.15
COL6A2-201ENST00000300527 RHOAP61586 193 aa14.13□□□□□ -0.15
COL6A2-201ENST00000300527 ZNF177Q13360 481 aaPredicted RBP14.13□□□□□ -0.15
COL6A2-201ENST00000300527 C22orf42Q6IC83 251 aa14.13□□□□□ -0.15
COL6A2-201ENST00000300527 CXCL17Q6UXB2 119 aa14.13□□□□□ -0.15
COL6A2-201ENST00000300527 CCDC28AQ8IWP9 274 aa14.13□□□□□ -0.15
COL6A2-201ENST00000300527 TIGD4Q8IY51 512 aa14.13□□□□□ -0.15
COL6A2-201ENST00000300527 FLCNQ8NFG4 579 aa14.13□□□□□ -0.15
COL6A2-201ENST00000300527 PHF21AQ96BD5 680 aa14.13□□□□□ -0.15
COL6A2-201ENST00000300527 SIGLEC11Q96RL6 698 aa14.13□□□□□ -0.15
COL6A2-201ENST00000300527 SLA2Q9H6Q3 261 aa14.13□□□□□ -0.15
COL6A2-201ENST00000300527 GKN1Q9NS71 199 aa14.13□□□□□ -0.15
COL6A2-201ENST00000300527 SATB2Q9UPW6 733 aa14.13□□□□□ -0.15
COL6A2-201ENST00000300527 SCML2Q9UQR0 700 aa14.13□□□□□ -0.15
COL6A2-201ENST00000300527 A0A1W2PQL4 384 aaPredicted RBP14.13□□□□□ -0.15
COL6A2-201ENST00000300527 YY2O15391 372 aa14.13□□□□□ -0.15
COL6A2-201ENST00000300527 SH3BP5O60239 455 aa14.13□□□□□ -0.15
COL6A2-201ENST00000300527 PRPS2P11908 318 aa14.13□□□□□ -0.15
COL6A2-201ENST00000300527 HLA-EP13747 358 aa14.13□□□□□ -0.15
COL6A2-201ENST00000300527 PSMA1P25786 263 aaKnown RBP14.13□□□□□ -0.15
COL6A2-201ENST00000300527 SOAT1P35610 550 aa14.13□□□□□ -0.15
COL6A2-201ENST00000300527 GJA5P36382 358 aa14.13□□□□□ -0.15
COL6A2-201ENST00000300527 OR3A3P47888 321 aa14.13□□□□□ -0.15
COL6A2-201ENST00000300527 SGSHP51688 502 aa14.13□□□□□ -0.15
COL6A2-201ENST00000300527 ALDH6A1Q02252 535 aaKnown RBP14.13□□□□□ -0.15
COL6A2-201ENST00000300527 PTGES3Q15185 160 aaKnown RBP14.13□□□□□ -0.15
COL6A2-201ENST00000300527 ZNF79Q15937 498 aa14.13□□□□□ -0.15
COL6A2-201ENST00000300527 UGT8Q16880 541 aa14.13□□□□□ -0.15
COL6A2-201ENST00000300527 IQCCQ4KMZ1 466 aa14.13□□□□□ -0.15
COL6A2-201ENST00000300527 UBE2R2Q712K3 238 aaPredicted RBP14.13□□□□□ -0.15
COL6A2-201ENST00000300527 TRIM46Q7Z4K8 759 aa14.13□□□□□ -0.15
COL6A2-201ENST00000300527 OR8H1Q8NGG4 311 aa14.13□□□□□ -0.15
COL6A2-201ENST00000300527 OR52E4Q8NGH9 312 aa14.13□□□□□ -0.15
COL6A2-201ENST00000300527 NXF2Q9GZY0 626 aaKnown RBP14.13□□□□□ -0.15
COL6A2-201ENST00000300527 MAP4K5Q9Y4K4 846 aa14.13□□□□□ -0.15
COL6A2-201ENST00000300527 NOS1APO75052 506 aaPredicted RBP14.13□□□□□ -0.15
COL6A2-201ENST00000300527 KCNJ10P78508 379 aa14.13□□□□□ -0.15
COL6A2-201ENST00000300527 CHIT1Q13231 466 aa14.13□□□□□ -0.15
COL6A2-201ENST00000300527 SERPINA11Q86U17 422 aa14.13□□□□□ -0.15
COL6A2-201ENST00000300527 ZNF280BQ86YH2 543 aa14.13□□□□□ -0.15
COL6A2-201ENST00000300527 PEX5LQ8IYB4 626 aa14.13□□□□□ -0.15
COL6A2-201ENST00000300527 EID2BQ96D98 161 aa14.13□□□□□ -0.15
COL6A2-201ENST00000300527 TSPAN18Q96SJ8 248 aa14.13□□□□□ -0.15
COL6A2-201ENST00000300527 PKP4Q99569 1192 aa14.13□□□□□ -0.15
COL6A2-201ENST00000300527 SMAD5Q99717 465 aaKnown RBP14.13□□□□□ -0.15
COL6A2-201ENST00000300527 NDUFAF4Q9P032 175 aa14.13□□□□□ -0.15
COL6A2-201ENST00000300527 NLKQ9UBE8 527 aa14.13□□□□□ -0.15
COL6A2-201ENST00000300527 CMAHPQ9Y471 501 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms