RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 HGH1Q9BTY7 390 aa20.15■□□□□ 0.82
SMCO4-201ENST00000298966 ING2Q9H160 280 aa20.15■□□□□ 0.82
SMCO4-201ENST00000298966 MARCOQ9UEW3 520 aaPredicted RBP20.15■□□□□ 0.82
SMCO4-201ENST00000298966 RARRES3Q9UL19 164 aa20.15■□□□□ 0.82
SMCO4-201ENST00000298966 ANGPTL3Q9Y5C1 460 aa20.15■□□□□ 0.82
SMCO4-201ENST00000298966 TAPBPO15533 448 aa20.14■□□□□ 0.81
SMCO4-201ENST00000298966 KIF1CO43896 1103 aaKnown RBP20.14■□□□□ 0.81
SMCO4-201ENST00000298966 DPM1O60762 260 aa20.14■□□□□ 0.81
SMCO4-201ENST00000298966 ESRRBO95718 433 aa20.14■□□□□ 0.81
SMCO4-201ENST00000298966 EPB42P16452 691 aa20.14■□□□□ 0.81
SMCO4-201ENST00000298966 PTPN4P29074 926 aa20.14■□□□□ 0.81
SMCO4-201ENST00000298966 SLC19A1P41440 591 aa20.14■□□□□ 0.81
SMCO4-201ENST00000298966 SLC6A12P48065 614 aa20.14■□□□□ 0.81
SMCO4-201ENST00000298966 AQP5P55064 265 aa20.14■□□□□ 0.81
SMCO4-201ENST00000298966 RPS18P62269 152 aaKnown RBP20.14■□□□□ 0.81
SMCO4-201ENST00000298966 GTF2H2Q13888 395 aa20.14■□□□□ 0.81
SMCO4-201ENST00000298966 ARHGAP19Q14CB8 494 aa20.14■□□□□ 0.81
SMCO4-201ENST00000298966 PRR30Q53SZ7 412 aaPredicted RBP20.14■□□□□ 0.81
SMCO4-201ENST00000298966 SPDYAQ5MJ70 313 aa20.14■□□□□ 0.81
SMCO4-201ENST00000298966 GTF2H2CQ6P1K8 395 aa20.14■□□□□ 0.81
SMCO4-201ENST00000298966 CCDC121Q6ZUS5 278 aa20.14■□□□□ 0.81
SMCO4-201ENST00000298966 OR9A1PQ8NGU1 263 aa20.14■□□□□ 0.81
SMCO4-201ENST00000298966 CFAP61Q8NHU2 1237 aa20.14■□□□□ 0.81
SMCO4-201ENST00000298966 AGAP11Q8TF27 550 aa20.14■□□□□ 0.81
SMCO4-201ENST00000298966 ZDHHC12Q96GR4 267 aa20.14■□□□□ 0.81
SMCO4-201ENST00000298966 FCRL4Q96PJ5 515 aa20.14■□□□□ 0.81
SMCO4-201ENST00000298966 CCT7Q99832 543 aa20.14■□□□□ 0.81
SMCO4-201ENST00000298966 TMEM79Q9BSE2 394 aa20.14■□□□□ 0.81
SMCO4-201ENST00000298966 RAB11FIP5Q9BXF6 653 aa20.14■□□□□ 0.81
SMCO4-201ENST00000298966 MVB12BQ9H7P6 319 aa20.14■□□□□ 0.81
SMCO4-201ENST00000298966 MRGBPQ9NV56 204 aa20.14■□□□□ 0.81
SMCO4-201ENST00000298966 SCHIP1Q9P0W5 487 aaPredicted RBP20.14■□□□□ 0.81
SMCO4-201ENST00000298966 SPATA7Q9P0W8 599 aa20.14■□□□□ 0.81
SMCO4-201ENST00000298966 LUZP4Q9P127 313 aa20.14■□□□□ 0.81
SMCO4-201ENST00000298966 POLG2Q9UHN1 485 aa20.14■□□□□ 0.81
SMCO4-201ENST00000298966 G3BP2Q9UN86 482 aaKnown RBP20.14■□□□□ 0.81
SMCO4-201ENST00000298966 ASF1AQ9Y294 204 aa20.14■□□□□ 0.81
SMCO4-201ENST00000298966 ZNF195O14628 629 aa20.13■□□□□ 0.81
SMCO4-201ENST00000298966 TIAF1O95411 115 aa20.13■□□□□ 0.81
SMCO4-201ENST00000298966 ENO1P06733 434 aaKnown RBP20.13■□□□□ 0.81
SMCO4-201ENST00000298966 KITP10721 976 aa20.13■□□□□ 0.81
SMCO4-201ENST00000298966 CCND1P24385 295 aa20.13■□□□□ 0.81
SMCO4-201ENST00000298966 NDUFS1P28331 727 aa20.13■□□□□ 0.81
SMCO4-201ENST00000298966 CAPZBP47756 277 aa20.13■□□□□ 0.81
SMCO4-201ENST00000298966 HSPA7P48741 367 aa20.13■□□□□ 0.81
SMCO4-201ENST00000298966 AGTR2P50052 363 aa20.13■□□□□ 0.81
SMCO4-201ENST00000298966 EEF1AKMT2Q5JPI9 291 aaKnown RBP20.13■□□□□ 0.81
SMCO4-201ENST00000298966 SH2D4BQ5SQS7 431 aa20.13■□□□□ 0.81
SMCO4-201ENST00000298966 IRGCQ6NXR0 463 aa20.13■□□□□ 0.81
SMCO4-201ENST00000298966 JMJD6Q6NYC1 403 aaPredicted RBP20.13■□□□□ 0.81
SMCO4-201ENST00000298966 ABRAXAS1Q6UWZ7 409 aa20.13■□□□□ 0.81
SMCO4-201ENST00000298966 FAM92BQ6ZTR7 304 aa20.13■□□□□ 0.81
SMCO4-201ENST00000298966 OR5K2Q8NHB8 316 aa20.13■□□□□ 0.81
SMCO4-201ENST00000298966 RSC1A1Q92681 617 aa20.13■□□□□ 0.81
SMCO4-201ENST00000298966 MID1IP1Q9NPA3 183 aa20.13■□□□□ 0.81
SMCO4-201ENST00000298966 ABCF3Q9NUQ8 709 aa20.13■□□□□ 0.81
SMCO4-201ENST00000298966 ZNF624Q9P2J8 865 aaPredicted RBP20.13■□□□□ 0.81
SMCO4-201ENST00000298966 ZDHHC2Q9UIJ5 367 aa20.13■□□□□ 0.81
SMCO4-201ENST00000298966 TRAF6Q9Y4K3 522 aa20.13■□□□□ 0.81
SMCO4-201ENST00000298966 WIPF3A6NGB9 483 aa20.12■□□□□ 0.81
SMCO4-201ENST00000298966 PDZK1P1A8MUH7 402 aa20.12■□□□□ 0.81
SMCO4-201ENST00000298966 AZIN1O14977 448 aa20.12■□□□□ 0.81
SMCO4-201ENST00000298966 CCNT2O60583 730 aaKnown RBP20.12■□□□□ 0.81
SMCO4-201ENST00000298966 CHEK2O96017 543 aa20.12■□□□□ 0.81
SMCO4-201ENST00000298966 NELFEP18615 380 aaKnown RBP20.12■□□□□ 0.81
SMCO4-201ENST00000298966 CDH13P55290 713 aa20.12■□□□□ 0.81
SMCO4-201ENST00000298966 HNRNPH2P55795 449 aaKnown RBP20.12■□□□□ 0.81
SMCO4-201ENST00000298966 TUBB3Q13509 450 aa20.12■□□□□ 0.81
SMCO4-201ENST00000298966 RBBP7Q16576 425 aa20.12■□□□□ 0.81
SMCO4-201ENST00000298966 FAM199XQ6PEV8 388 aaPredicted RBP20.12■□□□□ 0.81
SMCO4-201ENST00000298966 AGTRAPQ6RW13 159 aa20.12■□□□□ 0.81
SMCO4-201ENST00000298966 GPRIN3Q6ZVF9 776 aa20.12■□□□□ 0.81
SMCO4-201ENST00000298966 GOLGA7Q7Z5G4 137 aa20.12■□□□□ 0.81
SMCO4-201ENST00000298966 HPS6Q86YV9 775 aa20.12■□□□□ 0.81
SMCO4-201ENST00000298966 TRPC4APQ8TEL6 797 aa20.12■□□□□ 0.81
SMCO4-201ENST00000298966 LRRC37BQ96QE4 947 aa20.12■□□□□ 0.81
SMCO4-201ENST00000298966 NTMT1Q9BV86 223 aa20.12■□□□□ 0.81
SMCO4-201ENST00000298966 MFRPQ9BY79 579 aa20.12■□□□□ 0.81
SMCO4-201ENST00000298966 SEMA4BQ9NPR2 832 aaPredicted RBP20.12■□□□□ 0.81
SMCO4-201ENST00000298966 POT1Q9NUX5 634 aa20.12■□□□□ 0.81
SMCO4-201ENST00000298966 DNAJC11Q9NVH1 559 aa20.12■□□□□ 0.81
SMCO4-201ENST00000298966 STOX2Q9P2F5 926 aaPredicted RBP20.12■□□□□ 0.81
SMCO4-201ENST00000298966 ERRFI1Q9UJM3 462 aaPredicted RBP20.12■□□□□ 0.81
SMCO4-201ENST00000298966 FARSAQ9Y285 508 aaKnown RBP20.12■□□□□ 0.81
SMCO4-201ENST00000298966 UGDHO60701 494 aa20.11■□□□□ 0.81
SMCO4-201ENST00000298966 CRCPO75575 148 aa20.11■□□□□ 0.81
SMCO4-201ENST00000298966 LDLRP01130 860 aa20.11■□□□□ 0.81
SMCO4-201ENST00000298966 EBLN1P0CF75 366 aa20.11■□□□□ 0.81
SMCO4-201ENST00000298966 UROSP10746 265 aa20.11■□□□□ 0.81
SMCO4-201ENST00000298966 BDKRB1P46663 353 aa20.11■□□□□ 0.81
SMCO4-201ENST00000298966 CCNG1P51959 295 aa20.11■□□□□ 0.81
SMCO4-201ENST00000298966 PCDH1Q08174 1060 aa20.11■□□□□ 0.81
SMCO4-201ENST00000298966 IL10RAQ13651 578 aa20.11■□□□□ 0.81
SMCO4-201ENST00000298966 METTL21CQ5VZV1 264 aa20.11■□□□□ 0.81
SMCO4-201ENST00000298966 PWWP2BQ6NUJ5 590 aa20.11■□□□□ 0.81
SMCO4-201ENST00000298966 EPGNQ6UW88 154 aa20.11■□□□□ 0.81
SMCO4-201ENST00000298966 RNF165Q6ZSG1 346 aa20.11■□□□□ 0.81
SMCO4-201ENST00000298966 MAVSQ7Z434 540 aa20.11■□□□□ 0.81
SMCO4-201ENST00000298966 BPHLQ86WA6 291 aaPredicted RBP20.11■□□□□ 0.81
SMCO4-201ENST00000298966 RBM12BQ8IXT5 1001 aaKnown RBP20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms