RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 MAP3K8P41279 467 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 GLP1RP43220 463 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 MAGEB1P43366 347 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 FGFBP1Q14512 234 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 TMEM69Q5SWH9 247 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 SLC26A9Q7LBE3 791 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 GPAT4Q86UL3 456 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 OR10H5Q8NGA6 315 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 GPX8Q8TED1 209 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 TMEM41AQ96HV5 264 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 IDI2Q9BXS1 227 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 ASB7Q9H672 318 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 BRD7Q9NPI1 651 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 INPP5EQ9NRR6 644 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 ACAD8Q9UKU7 415 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 AK6Q9Y3D8 172 aaKnown RBP4.71□□□□□ -1.66
CSMD3-201ENST00000297405 MYOM1P52179 1685 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 GREB1LQ9C091 1923 aaPredicted RBP4.71□□□□□ -1.66
CSMD3-201ENST00000297405 PRRC2AP48634 2157 aaKnown RBP4.71□□□□□ -1.66
CSMD3-201ENST00000297405 SYNDIG1LA6NDD5 238 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 LIASO43766 372 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 STAG3L3P0CL85 134 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 NAT1P18440 290 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 PRPS1L1P21108 318 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 FPR1P21462 350 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 RNASE10Q5GAN6 216 aaKnown RBP4.71□□□□□ -1.66
CSMD3-201ENST00000297405 DPY19L4Q7Z388 723 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 TCTE3Q8IZS6 198 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 EFCAB3Q8N7B9 438 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 OR2T35Q8NGX2 323 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 C22orf15Q8WYQ4 148 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 ANKRD60Q9BZ19 345 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 SNTG1Q9NSN8 517 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 NUDT4Q9NZJ9 180 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 ARHGAP20Q9P2F6 1191 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 MGAT4CQ9UBM8 478 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 CD300AQ9UGN4 299 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 GIMD1P0DJR0 217 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 CKMT1AP12532 417 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 ASPAP45381 313 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 TRAM2Q15035 370 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 ZER1Q7Z7L7 766 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 ZNF584Q8IVC4 421 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 ZNF433Q8N7K0 673 aaPredicted RBP4.71□□□□□ -1.66
CSMD3-201ENST00000297405 ELP4Q96EB1 424 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 FCRL4Q96PJ5 515 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 YTHDF2Q9Y5A9 579 aaKnown RBP4.71□□□□□ -1.66
CSMD3-201ENST00000297405 DCNP07585 359 aaKnown RBP4.71□□□□□ -1.66
CSMD3-201ENST00000297405 ZNF286BP0CG31 522 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 JUPP14923 745 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 EPHA3P29320 983 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 RRAS2P62070 204 aaPredicted RBP4.71□□□□□ -1.66
CSMD3-201ENST00000297405 POU6F1Q14863 301 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 DPY19L2P1Q6NXN4 242 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 DHRS4L2Q6PKH6 230 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 RBMS3Q6XE24 437 aaKnown RBP4.71□□□□□ -1.66
CSMD3-201ENST00000297405 RDH10Q8IZV5 341 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 ZNF614Q8N883 585 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 TSEN2Q8NCE0 465 aaKnown RBP4.71□□□□□ -1.66
CSMD3-201ENST00000297405 OR4C5Q8NGB2 326 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 PHYHIPQ92561 330 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 PTERQ96BW5 349 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 SLC25A21Q9BQT8 299 aaPredicted RBP4.71□□□□□ -1.66
CSMD3-201ENST00000297405 SLC25A31Q9H0C2 315 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 TMEM185BQ9H7F4 350 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 ELL3Q9HB65 397 aaPredicted RBP4.71□□□□□ -1.66
CSMD3-201ENST00000297405 LRRC4CQ9HCJ2 640 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 DKKL1Q9UK85 242 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 DENND4AQ7Z401 1863 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 MYMKA6NI61 221 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 D6RAR5 112 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 CPSF4O95639 269 aaKnown RBP4.71□□□□□ -1.66
CSMD3-201ENST00000297405 CDC25CP30307 473 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 HOXA9P31269 272 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 DNASE1L1P49184 302 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 POLR2HP52434 150 aaKnown RBP4.71□□□□□ -1.66
CSMD3-201ENST00000297405 ARSFP54793 590 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 S100A10P60903 97 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 ST3GAL4Q11206 333 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 MAD2L1BPQ15013 274 aaPredicted RBP4.71□□□□□ -1.66
CSMD3-201ENST00000297405 FAM182AQ5T1J6 154 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 OGFOD2Q6N063 350 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 KCNT2Q6UVM3 1135 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 NIPA1Q7RTP0 329 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 GLT6D1Q7Z4J2 308 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 OR6T1Q8NGN1 323 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 ZNF251Q9BRH9 671 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 ATG5Q9H1Y0 275 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 VCX2Q9H322 139 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 NCOR1P1Q9H4R4 102 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 SOX17Q9H6I2 414 aaPredicted RBP4.71□□□□□ -1.66
CSMD3-201ENST00000297405 CDHR5Q9HBB8 845 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 TMEM181Q9P2C4 612 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 KLHL13Q9P2N7 655 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 N6AMT1Q9Y5N5 214 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 SNCAIPQ9Y6H5 919 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 GPR137BO60478 399 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 HRGP04196 525 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 FNTBP49356 437 aa4.71□□□□□ -1.66
CSMD3-201ENST00000297405 TAP2Q03519 686 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms