RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 NRIP1P48552 1158 aa10.69□□□□□ -0.7
PBRM1-201ENST00000296302 CDKL1Q00532 357 aa10.69□□□□□ -0.7
PBRM1-201ENST00000296302 TRAM1Q15629 374 aa10.69□□□□□ -0.7
PBRM1-201ENST00000296302 CHRNA6Q15825 494 aa10.69□□□□□ -0.7
PBRM1-201ENST00000296302 UGT8Q16880 541 aa10.69□□□□□ -0.7
PBRM1-201ENST00000296302 PTCHD3Q3KNS1 767 aa10.69□□□□□ -0.7
PBRM1-201ENST00000296302 C1orf189Q5VU69 101 aa10.69□□□□□ -0.7
PBRM1-201ENST00000296302 CYP4V2Q6ZWL3 525 aaPredicted RBP10.69□□□□□ -0.7
PBRM1-201ENST00000296302 PSD4Q8NDX1 1056 aa10.69□□□□□ -0.7
PBRM1-201ENST00000296302 PSKH2Q96QS6 385 aa10.69□□□□□ -0.7
PBRM1-201ENST00000296302 KCTD3Q9Y597 815 aa10.69□□□□□ -0.7
PBRM1-201ENST00000296302 FLRT2O43155 660 aa10.69□□□□□ -0.7
PBRM1-201ENST00000296302 SEPT4O43236 478 aa10.69□□□□□ -0.7
PBRM1-201ENST00000296302 RBMXL2O75526 392 aaKnown RBP10.69□□□□□ -0.7
PBRM1-201ENST00000296302 VIPP01282 170 aa10.69□□□□□ -0.7
PBRM1-201ENST00000296302 KLK1P06870 262 aa10.69□□□□□ -0.7
PBRM1-201ENST00000296302 CDK4P11802 303 aa10.69□□□□□ -0.7
PBRM1-201ENST00000296302 DNASE1P24855 282 aa10.69□□□□□ -0.7
PBRM1-201ENST00000296302 ETV4P43268 484 aa10.69□□□□□ -0.7
PBRM1-201ENST00000296302 OR12D2P58182 307 aa10.69□□□□□ -0.7
PBRM1-201ENST00000296302 VLDLRP98155 873 aa10.69□□□□□ -0.7
PBRM1-201ENST00000296302 EFR3AQ14156 821 aa10.69□□□□□ -0.7
PBRM1-201ENST00000296302 PRAMEF14Q5SWL7 426 aa10.69□□□□□ -0.7
PBRM1-201ENST00000296302 PRAMEF13Q5VWM6 474 aa10.69□□□□□ -0.7
PBRM1-201ENST00000296302 HAGHLQ6PII5 290 aaPredicted RBP10.69□□□□□ -0.7
PBRM1-201ENST00000296302 PRSS48Q7RTY5 328 aa10.69□□□□□ -0.7
PBRM1-201ENST00000296302 MTMR14Q8NCE2 650 aa10.69□□□□□ -0.7
PBRM1-201ENST00000296302 LCN9Q8WX39 176 aa10.69□□□□□ -0.7
PBRM1-201ENST00000296302 GAL3ST1Q99999 423 aa10.69□□□□□ -0.7
PBRM1-201ENST00000296302 DOHHQ9BU89 302 aa10.69□□□□□ -0.7
PBRM1-201ENST00000296302 TAPBPLQ9BX59 468 aa10.69□□□□□ -0.7
PBRM1-201ENST00000296302 CPQQ9Y646 472 aa10.69□□□□□ -0.7
PBRM1-201ENST00000296302 PRKYO43930 277 aa10.68□□□□□ -0.7
PBRM1-201ENST00000296302 RPS24P62847 133 aaKnown RBP10.68□□□□□ -0.7
PBRM1-201ENST00000296302 GALNT1Q10472 559 aaPredicted RBP10.68□□□□□ -0.7
PBRM1-201ENST00000296302 RPLP0P6Q8NHW5 317 aa10.68□□□□□ -0.7
PBRM1-201ENST00000296302 HYLS1Q96M11 299 aa10.68□□□□□ -0.7
PBRM1-201ENST00000296302 LHPPQ9H008 270 aa10.68□□□□□ -0.7
PBRM1-201ENST00000296302 SUV39H2Q9H5I1 410 aa10.68□□□□□ -0.7
PBRM1-201ENST00000296302 SIX4Q9UIU6 781 aa10.68□□□□□ -0.7
PBRM1-201ENST00000296302 LRRC72A6NJI9 287 aa10.68□□□□□ -0.7
PBRM1-201ENST00000296302 ARVCFO00192 962 aa10.68□□□□□ -0.7
PBRM1-201ENST00000296302 IFNA21P01568 189 aa10.68□□□□□ -0.7
PBRM1-201ENST00000296302 GNAO1P09471 354 aa10.68□□□□□ -0.7
PBRM1-201ENST00000296302 FSHRP23945 695 aa10.68□□□□□ -0.7
PBRM1-201ENST00000296302 KDELR2P33947 212 aa10.68□□□□□ -0.7
PBRM1-201ENST00000296302 MC1RQ01726 317 aa10.68□□□□□ -0.7
PBRM1-201ENST00000296302 SLC13A2Q13183 592 aa10.68□□□□□ -0.7
PBRM1-201ENST00000296302 PON3Q15166 354 aa10.68□□□□□ -0.7
PBRM1-201ENST00000296302 FAM110CQ1W6H9 321 aa10.68□□□□□ -0.7
PBRM1-201ENST00000296302 BAIAP2L2Q6UXY1 529 aa10.68□□□□□ -0.7
PBRM1-201ENST00000296302 TSPYL5Q86VY4 417 aaPredicted RBP10.68□□□□□ -0.7
PBRM1-201ENST00000296302 ZNF227Q86WZ6 799 aa10.68□□□□□ -0.7
PBRM1-201ENST00000296302 NEIL3Q8TAT5 605 aa10.68□□□□□ -0.7
PBRM1-201ENST00000296302 SCRN2Q96FV2 425 aa10.68□□□□□ -0.7
PBRM1-201ENST00000296302 CD180Q99467 661 aa10.68□□□□□ -0.7
PBRM1-201ENST00000296302 ERVW-1Q9UQF0 538 aa10.68□□□□□ -0.7
PBRM1-201ENST00000296302 ZNF670-ZNF695F2Z2N8 137 aa10.68□□□□□ -0.7
PBRM1-201ENST00000296302 PLSCR1O15162 318 aa10.68□□□□□ -0.7
PBRM1-201ENST00000296302 HTR2BP41595 481 aa10.68□□□□□ -0.7
PBRM1-201ENST00000296302 OR4D2P58180 307 aa10.68□□□□□ -0.7
PBRM1-201ENST00000296302 RASGEF1BQ0VAM2 473 aa10.68□□□□□ -0.7
PBRM1-201ENST00000296302 KCNC3Q14003 757 aa10.68□□□□□ -0.7
PBRM1-201ENST00000296302 PUM1Q14671 1186 aaKnown RBP eCLIP10.68□□□□□ -0.7
PBRM1-201ENST00000296302 ADGRF1Q5T601 910 aa10.68□□□□□ -0.7
PBRM1-201ENST00000296302 ATP6V1C2Q8NEY4 427 aa10.68□□□□□ -0.7
PBRM1-201ENST00000296302 OR8J1Q8NGP2 316 aa10.68□□□□□ -0.7
PBRM1-201ENST00000296302 MAELQ96JY0 434 aaKnown RBP10.68□□□□□ -0.7
PBRM1-201ENST00000296302 EMC3Q9P0I2 261 aa10.68□□□□□ -0.7
PBRM1-201ENST00000296302 NOP16Q9Y3C1 178 aaKnown RBP10.68□□□□□ -0.7
PBRM1-201ENST00000296302 CLCA3PQ9Y6N3 262 aa10.68□□□□□ -0.7
PBRM1-201ENST00000296302 TBC1D3DA0A087WVF3 549 aa10.68□□□□□ -0.7
PBRM1-201ENST00000296302 TBC1D3IA0A087WXS9 549 aa10.68□□□□□ -0.7
PBRM1-201ENST00000296302 TBC1D3EA0A087X179 549 aa10.68□□□□□ -0.7
PBRM1-201ENST00000296302 TBC1D3KA0A087X1G2 549 aa10.68□□□□□ -0.7
PBRM1-201ENST00000296302 TBC1D3FA6NER0 549 aaPredicted RBP10.68□□□□□ -0.7
PBRM1-201ENST00000296302 SOBPA7XYQ1 873 aa10.68□□□□□ -0.7
PBRM1-201ENST00000296302 TBC1D3LB9A6J9 549 aa10.68□□□□□ -0.7
PBRM1-201ENST00000296302 C9IYK1 514 aa10.68□□□□□ -0.7
PBRM1-201ENST00000296302 KAT7O95251 611 aa10.68□□□□□ -0.7
PBRM1-201ENST00000296302 TBC1D3HP0C7X1 549 aa10.68□□□□□ -0.7
PBRM1-201ENST00000296302 HOXD8P13378 290 aaPredicted RBP10.68□□□□□ -0.7
PBRM1-201ENST00000296302 PGAM2P15259 253 aa10.68□□□□□ -0.7
PBRM1-201ENST00000296302 GJA9P57773 515 aa10.68□□□□□ -0.7
PBRM1-201ENST00000296302 GINS1Q14691 196 aa10.68□□□□□ -0.7
PBRM1-201ENST00000296302 SPHARQ15513 63 aa10.68□□□□□ -0.7
PBRM1-201ENST00000296302 GRK1Q15835 563 aa10.68□□□□□ -0.7
PBRM1-201ENST00000296302 KLHL26Q53HC5 615 aa10.68□□□□□ -0.7
PBRM1-201ENST00000296302 CARD16Q5EG05 197 aa10.68□□□□□ -0.7
PBRM1-201ENST00000296302 TBC1D3GQ6DHY5 549 aa10.68□□□□□ -0.7
PBRM1-201ENST00000296302 TBC1D3CQ6IPX1 549 aa10.68□□□□□ -0.7
PBRM1-201ENST00000296302 NAPRTQ6XQN6 538 aa10.68□□□□□ -0.7
PBRM1-201ENST00000296302 AMZ2Q86W34 360 aa10.68□□□□□ -0.7
PBRM1-201ENST00000296302 ZFAND4Q86XD8 727 aa10.68□□□□□ -0.7
PBRM1-201ENST00000296302 UBQLNLQ8IYU4 475 aa10.68□□□□□ -0.7
PBRM1-201ENST00000296302 TBC1D3Q8IZP1 549 aaPredicted RBP10.68□□□□□ -0.7
PBRM1-201ENST00000296302 SAMD12Q8N8I0 201 aa10.68□□□□□ -0.7
PBRM1-201ENST00000296302 UTP4Q969X6 686 aaKnown RBP10.68□□□□□ -0.7
PBRM1-201ENST00000296302 TMIGD2Q96BF3 282 aa10.68□□□□□ -0.7
PBRM1-201ENST00000296302 MYOCQ99972 504 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms