RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 KLHL26Q53HC5 615 aa16.74■□□□□ 0.27
SHANK1-201ENST00000293441 AQP11Q8NBQ7 271 aa16.74■□□□□ 0.27
SHANK1-201ENST00000293441 WDR77Q9BQA1 342 aaPredicted RBP16.74■□□□□ 0.27
SHANK1-201ENST00000293441 SQORQ9Y6N5 450 aa16.74■□□□□ 0.27
SHANK1-201ENST00000293441 FAM72CH0Y354 149 aa16.74■□□□□ 0.27
SHANK1-201ENST00000293441 RORCP51449 518 aa16.74■□□□□ 0.27
SHANK1-201ENST00000293441 SMSP52788 366 aa16.74■□□□□ 0.27
SHANK1-201ENST00000293441 FAM72AQ5TYM5 149 aa16.74■□□□□ 0.27
SHANK1-201ENST00000293441 FAM72DQ6L9T8 149 aa16.74■□□□□ 0.27
SHANK1-201ENST00000293441 TAS1R3Q7RTX0 852 aa16.74■□□□□ 0.27
SHANK1-201ENST00000293441 FAM72BQ86X60 149 aa16.74■□□□□ 0.27
SHANK1-201ENST00000293441 RNF130Q86XS8 419 aa16.74■□□□□ 0.27
SHANK1-201ENST00000293441 IGSF8Q969P0 613 aa16.74■□□□□ 0.27
SHANK1-201ENST00000293441 ZNF395Q9H8N7 513 aaPredicted RBP16.74■□□□□ 0.27
SHANK1-201ENST00000293441 CXorf21Q9HAI6 301 aa16.74■□□□□ 0.27
SHANK1-201ENST00000293441 EBF2Q9HAK2 575 aa16.74■□□□□ 0.27
SHANK1-201ENST00000293441 TNFRSF10DQ9UBN6 386 aa16.74■□□□□ 0.27
SHANK1-201ENST00000293441 EFCAB9A8MZ26 197 aa16.74■□□□□ 0.27
SHANK1-201ENST00000293441 J3QLW9 94 aa16.74■□□□□ 0.27
SHANK1-201ENST00000293441 MID1O15344 667 aa16.74■□□□□ 0.27
SHANK1-201ENST00000293441 TSPAN6O43657 245 aa16.74■□□□□ 0.27
SHANK1-201ENST00000293441 ZNF19P17023 458 aa16.74■□□□□ 0.27
SHANK1-201ENST00000293441 RNF144AP50876 292 aaPredicted RBP16.74■□□□□ 0.27
SHANK1-201ENST00000293441 WDR4P57081 412 aaKnown RBP16.74■□□□□ 0.27
SHANK1-201ENST00000293441 SLC3A1Q07837 685 aa16.74■□□□□ 0.27
SHANK1-201ENST00000293441 DPY19L3Q6ZPD9 716 aa16.74■□□□□ 0.27
SHANK1-201ENST00000293441 DGLUCYQ7Z3D6 616 aa16.74■□□□□ 0.27
SHANK1-201ENST00000293441 NPAS3Q8IXF0 933 aa16.74■□□□□ 0.27
SHANK1-201ENST00000293441 ADAMTS10Q9H324 1103 aa16.74■□□□□ 0.27
SHANK1-201ENST00000293441 KAT8Q9H7Z6 458 aaKnown RBP16.74■□□□□ 0.27
SHANK1-201ENST00000293441 FZD3Q9NPG1 666 aa16.74■□□□□ 0.27
SHANK1-201ENST00000293441 POFUT2Q9Y2G5 429 aa16.74■□□□□ 0.27
SHANK1-201ENST00000293441 TOR1BO14657 336 aa16.73■□□□□ 0.27
SHANK1-201ENST00000293441 CCNKO75909 580 aa16.73■□□□□ 0.27
SHANK1-201ENST00000293441 DIRAS1O95057 198 aa16.73■□□□□ 0.27
SHANK1-201ENST00000293441 DUSP3P51452 185 aaPredicted RBP16.73■□□□□ 0.27
SHANK1-201ENST00000293441 ST3GAL3Q11203 375 aa16.73■□□□□ 0.27
SHANK1-201ENST00000293441 HERC3Q15034 1050 aa16.73■□□□□ 0.27
SHANK1-201ENST00000293441 TNFAIP8L3Q5GJ75 292 aa16.73■□□□□ 0.27
SHANK1-201ENST00000293441 ZNF101Q8IZC7 436 aa16.73■□□□□ 0.27
SHANK1-201ENST00000293441 SORCS1Q8WY21 1168 aa16.73■□□□□ 0.27
SHANK1-201ENST00000293441 TMED9Q9BVK6 235 aa16.73■□□□□ 0.27
SHANK1-201ENST00000293441 DLGAP4Q9Y2H0 992 aa16.73■□□□□ 0.27
SHANK1-201ENST00000293441 HNRNPA1P09651 372 aaKnown RBP eCLIP16.73■□□□□ 0.27
SHANK1-201ENST00000293441 PPP1R8Q12972 351 aaKnown RBP16.73■□□□□ 0.27
SHANK1-201ENST00000293441 ZNF542PQ5EBM4 170 aa16.73■□□□□ 0.27
SHANK1-201ENST00000293441 ZNF717Q9BY31 904 aaPredicted RBP16.73■□□□□ 0.27
SHANK1-201ENST00000293441 PTGES2Q9H7Z7 377 aa16.73■□□□□ 0.27
SHANK1-201ENST00000293441 GRHPRQ9UBQ7 328 aa16.73■□□□□ 0.27
SHANK1-201ENST00000293441 M0QX08 132 aa16.73■□□□□ 0.27
SHANK1-201ENST00000293441 GSTM3P21266 225 aa16.73■□□□□ 0.27
SHANK1-201ENST00000293441 SOX4Q06945 474 aaPredicted RBP16.73■□□□□ 0.27
SHANK1-201ENST00000293441 DAG1Q14118 895 aa16.73■□□□□ 0.27
SHANK1-201ENST00000293441 TSACCQ96A04 125 aaPredicted RBP16.73■□□□□ 0.27
SHANK1-201ENST00000293441 WDR92Q96MX6 357 aa16.73■□□□□ 0.27
SHANK1-201ENST00000293441 FTSJ1Q9UET6 329 aa16.73■□□□□ 0.27
SHANK1-201ENST00000293441 PRAMEF33A0A0G2JMD5 474 aa16.73■□□□□ 0.27
SHANK1-201ENST00000293441 IGLON5A6NGN9 336 aa16.73■□□□□ 0.27
SHANK1-201ENST00000293441 ZNF670-ZNF695F2Z2N8 137 aa16.73■□□□□ 0.27
SHANK1-201ENST00000293441 PRAMEF10O60809 474 aa16.73■□□□□ 0.27
SHANK1-201ENST00000293441 EGFLAMQ63HQ2 1017 aa16.73■□□□□ 0.27
SHANK1-201ENST00000293441 GPRIN1Q7Z2K8 1008 aa16.73■□□□□ 0.27
SHANK1-201ENST00000293441 GATSQ8NAP1 163 aa16.73■□□□□ 0.27
SHANK1-201ENST00000293441 THAP3Q8WTV1 239 aaPredicted RBP16.73■□□□□ 0.27
SHANK1-201ENST00000293441 PEX16Q9Y5Y5 336 aa16.73■□□□□ 0.27
SHANK1-201ENST00000293441 PDLIM1O00151 329 aa16.73■□□□□ 0.27
SHANK1-201ENST00000293441 ZNF783Q6ZMS7 281 aa16.73■□□□□ 0.27
SHANK1-201ENST00000293441 TMBIM1Q969X1 311 aa16.73■□□□□ 0.27
SHANK1-201ENST00000293441 ORAI3Q9BRQ5 295 aa16.73■□□□□ 0.27
SHANK1-201ENST00000293441 CSTBP04080 98 aaKnown RBP16.72■□□□□ 0.27
SHANK1-201ENST00000293441 JUNDP17535 347 aa16.72■□□□□ 0.27
SHANK1-201ENST00000293441 ZNF33AQ06730 810 aa16.72■□□□□ 0.27
SHANK1-201ENST00000293441 ZFP69Q49AA0 526 aa16.72■□□□□ 0.27
SHANK1-201ENST00000293441 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.72■□□□□ 0.27
SHANK1-201ENST00000293441 OR10T2Q8NGX3 314 aa16.72■□□□□ 0.27
SHANK1-201ENST00000293441 SLCO2A1Q92959 643 aa16.72■□□□□ 0.27
SHANK1-201ENST00000293441 GLYATL1Q969I3 302 aa16.72■□□□□ 0.27
SHANK1-201ENST00000293441 TMEM203Q969S6 136 aa16.72■□□□□ 0.27
SHANK1-201ENST00000293441 TTYH2Q9BSA4 534 aa16.72■□□□□ 0.27
SHANK1-201ENST00000293441 CHIAQ9BZP6 476 aa16.72■□□□□ 0.27
SHANK1-201ENST00000293441 KAT6AQ92794 2004 aa16.72■□□□□ 0.27
SHANK1-201ENST00000293441 A0A1W2PQU0 124 aa16.72■□□□□ 0.27
SHANK1-201ENST00000293441 SAGE2PA6NJ88 616 aa16.72■□□□□ 0.27
SHANK1-201ENST00000293441 CAPN5O15484 640 aaPredicted RBP16.72■□□□□ 0.27
SHANK1-201ENST00000293441 ACSBG2Q5FVE4 666 aa16.72■□□□□ 0.27
SHANK1-201ENST00000293441 PDPRQ8NCN5 879 aa16.72■□□□□ 0.27
SHANK1-201ENST00000293441 PYURFQ96I23 114 aa16.72■□□□□ 0.27
SHANK1-201ENST00000293441 TM9SF2Q99805 663 aa16.72■□□□□ 0.27
SHANK1-201ENST00000293441 OAZ3Q9UMX2 235 aa16.72■□□□□ 0.27
SHANK1-201ENST00000293441 ZNF878C9JN71 531 aa16.72■□□□□ 0.27
SHANK1-201ENST00000293441 AHSA1O95433 338 aa16.72■□□□□ 0.27
SHANK1-201ENST00000293441 PON2Q15165 354 aa16.72■□□□□ 0.27
SHANK1-201ENST00000293441 RBM48Q5RL73 367 aaKnown RBP16.72■□□□□ 0.27
SHANK1-201ENST00000293441 GPAT4Q86UL3 456 aa16.72■□□□□ 0.27
SHANK1-201ENST00000293441 SDR16C5Q8N3Y7 309 aa16.72■□□□□ 0.27
SHANK1-201ENST00000293441 CANT1Q8WVQ1 401 aa16.72■□□□□ 0.27
SHANK1-201ENST00000293441 TMEM74Q96NL1 305 aa16.72■□□□□ 0.27
SHANK1-201ENST00000293441 CMKLR1Q99788 373 aa16.72■□□□□ 0.27
SHANK1-201ENST00000293441 UCK2Q9BZX2 261 aa16.72■□□□□ 0.27
SHANK1-201ENST00000293441 ZNF639Q9UID6 485 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms