RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 IVDP26440 423 aa11.02□□□□□ -0.65
NPC1L1-201ENST00000289547 ACTR1BP42025 376 aa11.02□□□□□ -0.65
NPC1L1-201ENST00000289547 NSG1P42857 185 aa11.02□□□□□ -0.65
NPC1L1-201ENST00000289547 HNRNPFP52597 415 aaKnown RBP11.02□□□□□ -0.65
NPC1L1-201ENST00000289547 ACTR1AP61163 376 aa11.02□□□□□ -0.65
NPC1L1-201ENST00000289547 LAPTM4AQ15012 233 aa11.02□□□□□ -0.65
NPC1L1-201ENST00000289547 PAFAH1B3Q15102 231 aaKnown RBP11.02□□□□□ -0.65
NPC1L1-201ENST00000289547 UGT8Q16880 541 aa11.02□□□□□ -0.65
NPC1L1-201ENST00000289547 FAM78AQ5JUQ0 283 aa11.02□□□□□ -0.65
NPC1L1-201ENST00000289547 C1orf220Q5T0J3 134 aa11.02□□□□□ -0.65
NPC1L1-201ENST00000289547 ANXA8L1Q5VT79 327 aa11.02□□□□□ -0.65
NPC1L1-201ENST00000289547 OR10Q1Q8NGQ4 319 aa11.02□□□□□ -0.65
NPC1L1-201ENST00000289547 LILRB4Q8NHJ6 448 aa11.02□□□□□ -0.65
NPC1L1-201ENST00000289547 CRELD1Q96HD1 420 aa11.02□□□□□ -0.65
NPC1L1-201ENST00000289547 KCTD7Q96MP8 289 aa11.02□□□□□ -0.65
NPC1L1-201ENST00000289547 FCRL4Q96PJ5 515 aa11.02□□□□□ -0.65
NPC1L1-201ENST00000289547 IL4I1Q96RQ9 567 aa11.02□□□□□ -0.65
NPC1L1-201ENST00000289547 SAV1Q9H4B6 383 aaPredicted RBP11.02□□□□□ -0.65
NPC1L1-201ENST00000289547 SGK2Q9HBY8 427 aa11.02□□□□□ -0.65
NPC1L1-201ENST00000289547 PCDHGA4Q9Y5G9 962 aa11.02□□□□□ -0.65
NPC1L1-201ENST00000289547 PSAT1Q9Y617 370 aa11.02□□□□□ -0.65
NPC1L1-201ENST00000289547 L7N2F9 121 aa11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 EDIL3O43854 480 aa11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 SERPINB7O75635 380 aa11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 PKMP14618 531 aaKnown RBP11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 IRS1P35568 1242 aa11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 AFF1P51825 1210 aaKnown RBP11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 ELOCQ15369 112 aa11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 HSF5Q4G112 596 aaPredicted RBP11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 TMEM220Q6QAJ8 160 aa11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 AMZ2Q86W34 360 aa11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 OR4A15Q8NGL6 344 aa11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 SLC29A1Q99808 456 aa11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 SLC46A2Q9BY10 475 aa11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 EIF2B4Q9UI10 523 aaKnown RBP11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 IFT52Q9Y366 437 aa11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 ADAMTSL1Q8N6G6 1762 aa11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 CDRT1O95170 752 aa11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 RASAL1O95294 804 aa11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 IFNW1P05000 195 aa11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 LAMP2P13473 410 aa11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 IMPDH1P20839 514 aa11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 STOMP27105 288 aa11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 BUD31P41223 144 aaPredicted RBP11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 DGKQP52824 942 aa11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 ERVK-8P63133 956 aa11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 CBLBQ13191 982 aa11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 XKR6Q5GH73 641 aa11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 NCBP2-AS2Q69YL0 99 aa11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 SLITRK4Q8IW52 837 aa11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 SLC15A3Q8IY34 581 aa11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 LIX1Q8N485 282 aa11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 ZBTB2Q8N680 514 aa11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 CNIH3Q8TBE1 160 aa11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 LCN9Q8WX39 176 aa11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 DSN1Q9H410 356 aa11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 C1orf109Q9NX04 203 aa11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 ERVK-18Q9QC07 812 aa11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 SMIM30A4D0T7 59 aa11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 DNAJB5O75953 348 aa11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 ERP29P30040 261 aaKnown RBP11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 DNAJA1P31689 397 aaKnown RBP11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 CSTF2P33240 577 aaKnown RBP eCLIP11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 SLC1A2P43004 574 aa11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 NCS1P62166 190 aa11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 SWI5Q1ZZU3 235 aa11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 OR2T5Q6IEZ7 315 aa11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 SNX20Q7Z614 316 aa11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 GJD3Q8N144 294 aa11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 PLD6Q8N2A8 252 aaKnown RBP11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 OR2T29Q8NH02 315 aa11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 MOSPD2Q8NHP6 518 aa11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 RPLP0P6Q8NHW5 317 aa11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 DNASE1L2Q92874 299 aa11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 SIGLEC10Q96LC7 697 aa11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 KLF16Q9BXK1 252 aaPredicted RBP11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 OCEL1Q9H607 264 aa11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 MRPS33Q9Y291 106 aaKnown RBP11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 GRIP1Q9Y3R0 1128 aa11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 PCDHB3Q9Y5E6 796 aa11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 CPED1A4D0V7 1026 aa11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 UGT2B17O75795 530 aa11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 CNTN5O94779 1100 aa11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 CCNB2O95067 398 aa11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 CMPK1P30085 196 aa11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 MS4A2Q01362 244 aa11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 MPP7Q5T2T1 576 aa11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 KHDRBS2Q5VWX1 349 aaKnown RBP11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 CAPN13Q6MZZ7 669 aaPredicted RBP11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 KIAA1161Q6NSJ0 714 aa11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 UFD1Q92890 307 aa11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 COL21A1Q96P44 957 aa11.01□□□□□ -0.65
NPC1L1-201ENST00000289547 ZNF701M0R085 212 aaPredicted RBP11□□□□□ -0.65
NPC1L1-201ENST00000289547 M0R233 179 aa11□□□□□ -0.65
NPC1L1-201ENST00000289547 MTRF1O75570 445 aaKnown RBP11□□□□□ -0.65
NPC1L1-201ENST00000289547 DIRAS1O95057 198 aa11□□□□□ -0.65
NPC1L1-201ENST00000289547 ANXA8P13928 327 aa11□□□□□ -0.65
NPC1L1-201ENST00000289547 HPGDP15428 266 aa11□□□□□ -0.65
NPC1L1-201ENST00000289547 EFNA1P20827 205 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms