RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 KRT78Q8N1N4 520 aa18.88■□□□□ 0.61
TIMP4-201ENST00000287814 AMER3Q8N944 861 aa18.88■□□□□ 0.61
TIMP4-201ENST00000287814 OR9A4Q8NGU2 314 aa18.88■□□□□ 0.61
TIMP4-201ENST00000287814 NOL11Q9H8H0 719 aaKnown RBP18.88■□□□□ 0.61
TIMP4-201ENST00000287814 CTSFQ9UBX1 484 aa18.88■□□□□ 0.61
TIMP4-201ENST00000287814 GRID1Q9ULK0 1009 aa18.88■□□□□ 0.61
TIMP4-201ENST00000287814 ZNF891A8MT65 544 aaPredicted RBP18.87■□□□□ 0.61
TIMP4-201ENST00000287814 C9J4A7 227 aa18.87■□□□□ 0.61
TIMP4-201ENST00000287814 PPP6CO00743 305 aa18.87■□□□□ 0.61
TIMP4-201ENST00000287814 PLIN3O60664 434 aa18.87■□□□□ 0.61
TIMP4-201ENST00000287814 ERLIN1O75477 346 aa18.87■□□□□ 0.61
TIMP4-201ENST00000287814 IL1RNP18510 177 aa18.87■□□□□ 0.61
TIMP4-201ENST00000287814 TAC1P20366 129 aa18.87■□□□□ 0.61
TIMP4-201ENST00000287814 ATP5F1P24539 256 aaPredicted RBP18.87■□□□□ 0.61
TIMP4-201ENST00000287814 HNF4AP41235 474 aa18.87■□□□□ 0.61
TIMP4-201ENST00000287814 CDH13P55290 713 aa18.87■□□□□ 0.61
TIMP4-201ENST00000287814 IL10RAQ13651 578 aa18.87■□□□□ 0.61
TIMP4-201ENST00000287814 ERV3-1Q14264 604 aa18.87■□□□□ 0.61
TIMP4-201ENST00000287814 NDUFA9Q16795 377 aa18.87■□□□□ 0.61
TIMP4-201ENST00000287814 PDSS2Q86YH6 399 aa18.87■□□□□ 0.61
TIMP4-201ENST00000287814 BANPQ8N9N5 519 aa18.87■□□□□ 0.61
TIMP4-201ENST00000287814 TRPV3Q8NET8 790 aa18.87■□□□□ 0.61
TIMP4-201ENST00000287814 OR52B6Q8NGF0 335 aa18.87■□□□□ 0.61
TIMP4-201ENST00000287814 COL26A1Q96A83 441 aa18.87■□□□□ 0.61
TIMP4-201ENST00000287814 MVB12AQ96EY5 273 aa18.87■□□□□ 0.61
TIMP4-201ENST00000287814 MMABQ96EY8 250 aaPredicted RBP18.87■□□□□ 0.61
TIMP4-201ENST00000287814 CDK15Q96Q40 435 aa18.87■□□□□ 0.61
TIMP4-201ENST00000287814 C1QTNF3Q9BXJ4 246 aa18.87■□□□□ 0.61
TIMP4-201ENST00000287814 SLC6A16Q9GZN6 736 aa18.87■□□□□ 0.61
TIMP4-201ENST00000287814 PITHD1Q9GZP4 211 aaPredicted RBP18.87■□□□□ 0.61
TIMP4-201ENST00000287814 A0A1B0GTL3 188 aa18.86■□□□□ 0.61
TIMP4-201ENST00000287814 C4orf51C9J302 202 aa18.86■□□□□ 0.61
TIMP4-201ENST00000287814 TSPAN8P19075 237 aa18.86■□□□□ 0.61
TIMP4-201ENST00000287814 NKG7Q16617 165 aa18.86■□□□□ 0.61
TIMP4-201ENST00000287814 SYT16Q17RD7 645 aa18.86■□□□□ 0.61
TIMP4-201ENST00000287814 UNC50Q53HI1 259 aa18.86■□□□□ 0.61
TIMP4-201ENST00000287814 GPR155Q7Z3F1 870 aa18.86■□□□□ 0.61
TIMP4-201ENST00000287814 AFAP1L2Q8N4X5 818 aa18.86■□□□□ 0.61
TIMP4-201ENST00000287814 ZSCAN1Q8NBB4 408 aa18.86■□□□□ 0.61
TIMP4-201ENST00000287814 ZNF483Q8TF39 744 aaPredicted RBP18.86■□□□□ 0.61
TIMP4-201ENST00000287814 TMEM237Q96Q45 408 aa18.86■□□□□ 0.61
TIMP4-201ENST00000287814 RHBGQ9H310 441 aa18.86■□□□□ 0.61
TIMP4-201ENST00000287814 GPN3Q9UHW5 284 aaPredicted RBP18.86■□□□□ 0.61
TIMP4-201ENST00000287814 RNF11Q9Y3C5 154 aa18.86■□□□□ 0.61
TIMP4-201ENST00000287814 SLC22A7Q9Y694 548 aa18.86■□□□□ 0.61
TIMP4-201ENST00000287814 DNAJB6O75190 326 aa18.85■□□□□ 0.61
TIMP4-201ENST00000287814 SPAG7O75391 227 aa18.85■□□□□ 0.61
TIMP4-201ENST00000287814 SERPINA6P08185 405 aa18.85■□□□□ 0.61
TIMP4-201ENST00000287814 PRKAA2P54646 552 aa18.85■□□□□ 0.61
TIMP4-201ENST00000287814 HERVK_113P63132 956 aa18.85■□□□□ 0.61
TIMP4-201ENST00000287814 MAT1AQ00266 395 aaKnown RBP18.85■□□□□ 0.61
TIMP4-201ENST00000287814 LAPTM5Q13571 262 aa18.85■□□□□ 0.61
TIMP4-201ENST00000287814 PAGE2BQ5JRK9 111 aa18.85■□□□□ 0.61
TIMP4-201ENST00000287814 ZNF678Q5SXM1 525 aa18.85■□□□□ 0.61
TIMP4-201ENST00000287814 CEP85LQ5SZL2 805 aa18.85■□□□□ 0.61
TIMP4-201ENST00000287814 FAM219BQ5XKK7 198 aa18.85■□□□□ 0.61
TIMP4-201ENST00000287814 GRHL2Q6ISB3 625 aa18.85■□□□□ 0.61
TIMP4-201ENST00000287814 UTP15Q8TED0 518 aaKnown RBP18.85■□□□□ 0.61
TIMP4-201ENST00000287814 FKBP10Q96AY3 582 aa18.85■□□□□ 0.61
TIMP4-201ENST00000287814 C17orf62Q9BQA9 187 aa18.85■□□□□ 0.61
TIMP4-201ENST00000287814 ERVK-6Q9BXR3 956 aa18.85■□□□□ 0.61
TIMP4-201ENST00000287814 FAM117AQ9C073 453 aa18.85■□□□□ 0.61
TIMP4-201ENST00000287814 SLC26A1Q9H2B4 701 aa18.85■□□□□ 0.61
TIMP4-201ENST00000287814 ACTR8Q9H981 624 aa18.85■□□□□ 0.61
TIMP4-201ENST00000287814 SEMA4BQ9NPR2 832 aaPredicted RBP18.85■□□□□ 0.61
TIMP4-201ENST00000287814 MKS1Q9NXB0 559 aa18.85■□□□□ 0.61
TIMP4-201ENST00000287814 CDC14AQ9UNH5 594 aa18.85■□□□□ 0.61
TIMP4-201ENST00000287814 PTRH2Q9Y3E5 179 aaKnown RBP18.85■□□□□ 0.61
TIMP4-201ENST00000287814 SGK494L7N484 410 aa18.85■□□□□ 0.61
TIMP4-201ENST00000287814 NSA2O95478 260 aaKnown RBP18.85■□□□□ 0.61
TIMP4-201ENST00000287814 ALBP02768 609 aa18.85■□□□□ 0.61
TIMP4-201ENST00000287814 ZNF888P0CJ79 500 aaPredicted RBP18.85■□□□□ 0.61
TIMP4-201ENST00000287814 SMIM10L1P0DMW3 83 aa18.85■□□□□ 0.61
TIMP4-201ENST00000287814 PIM1P11309 404 aaPredicted RBP18.85■□□□□ 0.61
TIMP4-201ENST00000287814 IMPDH1P20839 514 aa18.85■□□□□ 0.61
TIMP4-201ENST00000287814 FBLP22087 321 aaKnown RBP18.85■□□□□ 0.61
TIMP4-201ENST00000287814 HNRNPH1P31943 449 aaKnown RBP18.85■□□□□ 0.61
TIMP4-201ENST00000287814 PIK3CGP48736 1102 aa18.85■□□□□ 0.61
TIMP4-201ENST00000287814 RAB8AP61006 207 aa18.85■□□□□ 0.61
TIMP4-201ENST00000287814 RGS1Q08116 209 aa18.85■□□□□ 0.61
TIMP4-201ENST00000287814 CDC20Q12834 499 aa18.85■□□□□ 0.61
TIMP4-201ENST00000287814 DSG2Q14126 1118 aa18.85■□□□□ 0.61
TIMP4-201ENST00000287814 HIST2H2ACQ16777 129 aaPredicted RBP18.85■□□□□ 0.61
TIMP4-201ENST00000287814 CCDC153Q494R4 210 aa18.85■□□□□ 0.61
TIMP4-201ENST00000287814 HIST2H2AA3Q6FI13 130 aa18.85■□□□□ 0.61
TIMP4-201ENST00000287814 ZYG11AQ6WRX3 759 aa18.85■□□□□ 0.61
TIMP4-201ENST00000287814 SHISA6Q6ZSJ9 500 aa18.85■□□□□ 0.61
TIMP4-201ENST00000287814 SYVN1Q86TM6 617 aa18.85■□□□□ 0.61
TIMP4-201ENST00000287814 MYLK4Q86YV6 388 aaPredicted RBP18.85■□□□□ 0.61
TIMP4-201ENST00000287814 LAS2Q8IYD9 372 aa18.85■□□□□ 0.61
TIMP4-201ENST00000287814 RNF175Q8N4F7 328 aa18.85■□□□□ 0.61
TIMP4-201ENST00000287814 L3MBTL4Q8NA19 623 aa18.85■□□□□ 0.61
TIMP4-201ENST00000287814 OR7G3Q8NG95 312 aa18.85■□□□□ 0.61
TIMP4-201ENST00000287814 SMIM10Q96HG1 83 aa18.85■□□□□ 0.61
TIMP4-201ENST00000287814 APOPT1Q96IL0 206 aa18.85■□□□□ 0.61
TIMP4-201ENST00000287814 SPSB2Q99619 263 aa18.85■□□□□ 0.61
TIMP4-201ENST00000287814 LHX6Q9UPM6 363 aa18.85■□□□□ 0.61
TIMP4-201ENST00000287814 PLLPQ9Y342 182 aa18.85■□□□□ 0.61
TIMP4-201ENST00000287814 NAALAD2Q9Y3Q0 740 aa18.85■□□□□ 0.61
TIMP4-201ENST00000287814 LRIT2A6NDA9 550 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms