RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 AURKBQ96GD4 344 aaPredicted RBP10.9□□□□□ -0.66
USP6NL-201ENST00000277575 CSNK1G1Q9HCP0 422 aa10.9□□□□□ -0.66
USP6NL-201ENST00000277575 MED31Q9Y3C7 131 aa10.9□□□□□ -0.66
USP6NL-201ENST00000277575 PKD1L3Q7Z443 1732 aa10.9□□□□□ -0.67
USP6NL-201ENST00000277575 FAM240BA0A1B0GVZ2 78 aa10.9□□□□□ -0.67
USP6NL-201ENST00000277575 DAPL1A0PJW8 107 aa10.9□□□□□ -0.67
USP6NL-201ENST00000277575 OR5K4A6NMS3 321 aa10.9□□□□□ -0.67
USP6NL-201ENST00000277575 MID1O15344 667 aa10.9□□□□□ -0.67
USP6NL-201ENST00000277575 BCKDHAP12694 445 aa10.9□□□□□ -0.67
USP6NL-201ENST00000277575 FPR1P21462 350 aa10.9□□□□□ -0.67
USP6NL-201ENST00000277575 FMO3P31513 532 aa10.9□□□□□ -0.67
USP6NL-201ENST00000277575 PPP2R2BQ00005 443 aa10.9□□□□□ -0.67
USP6NL-201ENST00000277575 DOC2AQ14183 400 aa10.9□□□□□ -0.67
USP6NL-201ENST00000277575 LCN1P1Q5VSP4 162 aa10.9□□□□□ -0.67
USP6NL-201ENST00000277575 NANOGP8Q6NSW7 305 aa10.9□□□□□ -0.67
USP6NL-201ENST00000277575 OR52B6Q8NGF0 335 aa10.9□□□□□ -0.67
USP6NL-201ENST00000277575 MAPK15Q8TD08 544 aa10.9□□□□□ -0.67
USP6NL-201ENST00000277575 SETD7Q8WTS6 366 aaKnown RBP10.9□□□□□ -0.67
USP6NL-201ENST00000277575 HSH2DQ96JZ2 352 aa10.9□□□□□ -0.67
USP6NL-201ENST00000277575 CLSTN3Q9BQT9 956 aa10.9□□□□□ -0.67
USP6NL-201ENST00000277575 NANOGQ9H9S0 305 aa10.9□□□□□ -0.67
USP6NL-201ENST00000277575 NKIRAS2Q9NYR9 191 aa10.9□□□□□ -0.67
USP6NL-201ENST00000277575 IL17CQ9P0M4 197 aa10.9□□□□□ -0.67
USP6NL-201ENST00000277575 C2orf74A8MZ97 194 aa10.89□□□□□ -0.67
USP6NL-201ENST00000277575 MAN2B1O00754 1011 aa10.89□□□□□ -0.67
USP6NL-201ENST00000277575 PSIP1O75475 530 aaKnown RBP10.89□□□□□ -0.67
USP6NL-201ENST00000277575 CD2P06729 351 aa10.89□□□□□ -0.67
USP6NL-201ENST00000277575 PRSS56P0CW18 603 aa10.89□□□□□ -0.67
USP6NL-201ENST00000277575 PIM1P11309 404 aaPredicted RBP10.89□□□□□ -0.67
USP6NL-201ENST00000277575 PFKLP17858 780 aa10.89□□□□□ -0.67
USP6NL-201ENST00000277575 C5AR1P21730 350 aa10.89□□□□□ -0.67
USP6NL-201ENST00000277575 TBPL1P62380 186 aa10.89□□□□□ -0.67
USP6NL-201ENST00000277575 CRTC2Q53ET0 693 aaPredicted RBP10.89□□□□□ -0.67
USP6NL-201ENST00000277575 RNF130Q86XS8 419 aa10.89□□□□□ -0.67
USP6NL-201ENST00000277575 TMEM156Q8N614 296 aa10.89□□□□□ -0.67
USP6NL-201ENST00000277575 FAR1Q8WVX9 515 aa10.89□□□□□ -0.67
USP6NL-201ENST00000277575 ZNF689Q96CS4 500 aaPredicted RBP10.89□□□□□ -0.67
USP6NL-201ENST00000277575 DPH7Q9BTV6 452 aa10.89□□□□□ -0.67
USP6NL-201ENST00000277575 BOCQ9BWV1 1114 aa10.89□□□□□ -0.67
USP6NL-201ENST00000277575 OR8D2Q9GZM6 311 aa10.89□□□□□ -0.67
USP6NL-201ENST00000277575 SERINC1Q9NRX5 453 aa10.89□□□□□ -0.67
USP6NL-201ENST00000277575 COMMD9Q9P000 198 aa10.89□□□□□ -0.67
USP6NL-201ENST00000277575 TRPM3Q9HCF6 1732 aaPredicted RBP10.89□□□□□ -0.67
USP6NL-201ENST00000277575 ARHGEF33A8MVX0 844 aa10.89□□□□□ -0.67
USP6NL-201ENST00000277575 SMAD6O43541 496 aaKnown RBP10.89□□□□□ -0.67
USP6NL-201ENST00000277575 GSTM3P21266 225 aa10.89□□□□□ -0.67
USP6NL-201ENST00000277575 RPL6Q02878 288 aaKnown RBP10.89□□□□□ -0.67
USP6NL-201ENST00000277575 ST3GAL3Q11203 375 aa10.89□□□□□ -0.67
USP6NL-201ENST00000277575 DECR1Q16698 335 aa10.89□□□□□ -0.67
USP6NL-201ENST00000277575 KIAA1161Q6NSJ0 714 aa10.89□□□□□ -0.67
USP6NL-201ENST00000277575 REEP3Q6NUK4 255 aa10.89□□□□□ -0.67
USP6NL-201ENST00000277575 C6orf89Q6UWU4 347 aa10.89□□□□□ -0.67
USP6NL-201ENST00000277575 ERMP1Q7Z2K6 904 aa10.89□□□□□ -0.67
USP6NL-201ENST00000277575 PNPLA1Q8N8W4 532 aa10.89□□□□□ -0.67
USP6NL-201ENST00000277575 ANKLE1Q8NAG6 615 aa10.89□□□□□ -0.67
USP6NL-201ENST00000277575 OR4K14Q8NGD5 310 aa10.89□□□□□ -0.67
USP6NL-201ENST00000277575 DENND1AQ8TEH3 1009 aa10.89□□□□□ -0.67
USP6NL-201ENST00000277575 KCNC2Q96PR1 638 aa10.89□□□□□ -0.67
USP6NL-201ENST00000277575 MVB12BQ9H7P6 319 aa10.89□□□□□ -0.67
USP6NL-201ENST00000277575 IL21RQ9HBE5 538 aa10.89□□□□□ -0.67
USP6NL-201ENST00000277575 POFUT2Q9Y2G5 429 aa10.89□□□□□ -0.67
USP6NL-201ENST00000277575 MYH15Q9Y2K3 1946 aa10.89□□□□□ -0.67
USP6NL-201ENST00000277575 SCDO00767 359 aa10.89□□□□□ -0.67
USP6NL-201ENST00000277575 PCDHGA12O60330 932 aa10.89□□□□□ -0.67
USP6NL-201ENST00000277575 SNX4O95219 450 aa10.89□□□□□ -0.67
USP6NL-201ENST00000277575 LDOC1O95751 146 aaPredicted RBP10.89□□□□□ -0.67
USP6NL-201ENST00000277575 PDYNP01213 254 aa10.89□□□□□ -0.67
USP6NL-201ENST00000277575 IL4RP24394 825 aa10.89□□□□□ -0.67
USP6NL-201ENST00000277575 SDC2P34741 201 aa10.89□□□□□ -0.67
USP6NL-201ENST00000277575 MOGSQ13724 837 aa10.89□□□□□ -0.67
USP6NL-201ENST00000277575 SLC25A24Q6NUK1 477 aa10.89□□□□□ -0.67
USP6NL-201ENST00000277575 BTN2A1Q7KYR7 527 aa10.89□□□□□ -0.67
USP6NL-201ENST00000277575 ISCA2Q86U28 154 aa10.89□□□□□ -0.67
USP6NL-201ENST00000277575 CCDC116Q8IYX3 515 aa10.89□□□□□ -0.67
USP6NL-201ENST00000277575 GHDCQ8N2G8 530 aa10.89□□□□□ -0.67
USP6NL-201ENST00000277575 FCGR1BQ92637 280 aa10.89□□□□□ -0.67
USP6NL-201ENST00000277575 PLEKHA1Q9HB21 404 aa10.89□□□□□ -0.67
USP6NL-201ENST00000277575 FARSBQ9NSD9 589 aaKnown RBP10.89□□□□□ -0.67
USP6NL-201ENST00000277575 MS4A12Q9NXJ0 267 aa10.89□□□□□ -0.67
USP6NL-201ENST00000277575 HCSTQ9UBK5 93 aa10.89□□□□□ -0.67
USP6NL-201ENST00000277575 SATB2Q9UPW6 733 aa10.89□□□□□ -0.67
USP6NL-201ENST00000277575 USP3Q9Y6I4 520 aa10.89□□□□□ -0.67
USP6NL-201ENST00000277575 KLHL33A6NCF5 533 aa10.88□□□□□ -0.67
USP6NL-201ENST00000277575 LINGO3P0C6S8 592 aa10.88□□□□□ -0.67
USP6NL-201ENST00000277575 ADRB3P13945 408 aa10.88□□□□□ -0.67
USP6NL-201ENST00000277575 HSD3B1P14060 373 aa10.88□□□□□ -0.67
USP6NL-201ENST00000277575 HRH2P25021 359 aa10.88□□□□□ -0.67
USP6NL-201ENST00000277575 HSD3B2P26439 372 aa10.88□□□□□ -0.67
USP6NL-201ENST00000277575 TIA1P31483 386 aaKnown RBP eCLIP10.88□□□□□ -0.67
USP6NL-201ENST00000277575 GNALP38405 381 aa10.88□□□□□ -0.67
USP6NL-201ENST00000277575 DNASE1L1P49184 302 aa10.88□□□□□ -0.67
USP6NL-201ENST00000277575 MADCAM1Q13477 382 aa10.88□□□□□ -0.67
USP6NL-201ENST00000277575 IL18Q14116 193 aa10.88□□□□□ -0.67
USP6NL-201ENST00000277575 OR4D1Q15615 310 aa10.88□□□□□ -0.67
USP6NL-201ENST00000277575 ZIC5Q96T25 663 aa10.88□□□□□ -0.67
USP6NL-201ENST00000277575 SLC17A9Q9BYT1 436 aa10.88□□□□□ -0.67
USP6NL-201ENST00000277575 KCNH6Q9H252 994 aa10.88□□□□□ -0.67
USP6NL-201ENST00000277575 IL26Q9NPH9 171 aa10.88□□□□□ -0.67
USP6NL-201ENST00000277575 TAS2R9Q9NYW1 312 aa10.88□□□□□ -0.67
USP6NL-201ENST00000277575 ADAM12O43184 909 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms