RNA–Protein interactions for RNA: ENST00000275560.3

SSC4D-201, Transcript of scavenger receptor cysteine rich family member with 4 domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSC4D, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC4D-201ENST00000275560 CLEC2DQ9UHP7 191 aa17.99■□□□□ 0.47
SSC4D-201ENST00000275560 CENPBD1B2RD01 187 aa17.98■□□□□ 0.47
SSC4D-201ENST00000275560 ERVH48-1M5A8F1 160 aa17.98■□□□□ 0.47
SSC4D-201ENST00000275560 PAX3P23760 479 aa17.98■□□□□ 0.47
SSC4D-201ENST00000275560 RING1Q06587 406 aa17.98■□□□□ 0.47
SSC4D-201ENST00000275560 FBXO43Q4G163 708 aa17.98■□□□□ 0.47
SSC4D-201ENST00000275560 COX20Q5RI15 118 aa17.98■□□□□ 0.47
SSC4D-201ENST00000275560 SLC44A2Q8IWA5 706 aaPredicted RBP17.98■□□□□ 0.47
SSC4D-201ENST00000275560 BBS7Q8IWZ6 715 aa17.98■□□□□ 0.47
SSC4D-201ENST00000275560 DEPDC4Q8N2C3 294 aa17.98■□□□□ 0.47
SSC4D-201ENST00000275560 UBTD2Q8WUN7 234 aa17.98■□□□□ 0.47
SSC4D-201ENST00000275560 FUBP3Q96I24 572 aaKnown RBP eCLIP17.98■□□□□ 0.47
SSC4D-201ENST00000275560 IL4I1Q96RQ9 567 aa17.98■□□□□ 0.47
SSC4D-201ENST00000275560 RAD9AQ99638 391 aa17.98■□□□□ 0.47
SSC4D-201ENST00000275560 CFL2Q9Y281 166 aa17.98■□□□□ 0.47
SSC4D-201ENST00000275560 VWA8A3KMH1 1905 aa17.98■□□□□ 0.47
SSC4D-201ENST00000275560 EFCAB10A6NFE3 127 aa17.98■□□□□ 0.47
SSC4D-201ENST00000275560 SSTR4P31391 388 aa17.98■□□□□ 0.47
SSC4D-201ENST00000275560 FEN1P39748 380 aaKnown RBP17.98■□□□□ 0.47
SSC4D-201ENST00000275560 RHOAP61586 193 aa17.98■□□□□ 0.47
SSC4D-201ENST00000275560 HOXC5Q00444 222 aa17.98■□□□□ 0.47
SSC4D-201ENST00000275560 HSPA14Q0VDF9 509 aa17.98■□□□□ 0.47
SSC4D-201ENST00000275560 MTAPQ13126 283 aa17.98■□□□□ 0.47
SSC4D-201ENST00000275560 GPR155Q7Z3F1 870 aa17.98■□□□□ 0.47
SSC4D-201ENST00000275560 LHX3Q9UBR4 397 aa17.98■□□□□ 0.47
SSC4D-201ENST00000275560 VNN2O95498 520 aa17.97■□□□□ 0.47
SSC4D-201ENST00000275560 IL7P13232 177 aa17.97■□□□□ 0.47
SSC4D-201ENST00000275560 HOXB6P17509 224 aaKnown RBP17.97■□□□□ 0.47
SSC4D-201ENST00000275560 ACRV1P26436 265 aa17.97■□□□□ 0.47
SSC4D-201ENST00000275560 DDOSTP39656 456 aa17.97■□□□□ 0.47
SSC4D-201ENST00000275560 UBE2R2Q712K3 238 aaPredicted RBP17.97■□□□□ 0.47
SSC4D-201ENST00000275560 VRK3Q8IV63 474 aa17.97■□□□□ 0.47
SSC4D-201ENST00000275560 PGBD3Q8N328 593 aa17.97■□□□□ 0.47
SSC4D-201ENST00000275560 UBASH3BQ8TF42 649 aa17.97■□□□□ 0.47
SSC4D-201ENST00000275560 RNF170Q96K19 258 aa17.97■□□□□ 0.47
SSC4D-201ENST00000275560 HHIPQ96QV1 700 aa17.97■□□□□ 0.47
SSC4D-201ENST00000275560 DOHHQ9BU89 302 aa17.97■□□□□ 0.47
SSC4D-201ENST00000275560 HCSTQ9UBK5 93 aa17.97■□□□□ 0.47
SSC4D-201ENST00000275560 KLK4Q9Y5K2 254 aa17.97■□□□□ 0.47
SSC4D-201ENST00000275560 DNMT3AQ9Y6K1 912 aaPredicted RBP17.97■□□□□ 0.47
SSC4D-201ENST00000275560 BPIP17213 487 aa17.97■□□□□ 0.47
SSC4D-201ENST00000275560 HNF4AP41235 474 aa17.97■□□□□ 0.47
SSC4D-201ENST00000275560 ERICH5Q6P6B1 374 aa17.97■□□□□ 0.47
SSC4D-201ENST00000275560 CERS6Q6ZMG9 384 aa17.97■□□□□ 0.47
SSC4D-201ENST00000275560 RFLNAQ6ZTI6 216 aa17.97■□□□□ 0.47
SSC4D-201ENST00000275560 RFPL4BQ6ZWI9 263 aa17.97■□□□□ 0.47
SSC4D-201ENST00000275560 BCDIN3DQ7Z5W3 292 aaKnown RBP17.97■□□□□ 0.47
SSC4D-201ENST00000275560 TSPAN33Q86UF1 283 aa17.97■□□□□ 0.47
SSC4D-201ENST00000275560 CCDC32Q9BV29 185 aa17.97■□□□□ 0.47
SSC4D-201ENST00000275560 IRF2BPLQ9H1B7 796 aa17.97■□□□□ 0.47
SSC4D-201ENST00000275560 ZFYVE1Q9HBF4 777 aa17.97■□□□□ 0.47
SSC4D-201ENST00000275560 NMRK2Q9NPI5 230 aa17.97■□□□□ 0.47
SSC4D-201ENST00000275560 TRPV5Q9NQA5 729 aa17.97■□□□□ 0.47
SSC4D-201ENST00000275560 NPAP1Q9NZP6 1156 aa17.97■□□□□ 0.47
SSC4D-201ENST00000275560 ALX3O95076 343 aa17.96■□□□□ 0.47
SSC4D-201ENST00000275560 IGFBP1P08833 259 aaPredicted RBP17.96■□□□□ 0.47
SSC4D-201ENST00000275560 ETFAP13804 333 aa17.96■□□□□ 0.47
SSC4D-201ENST00000275560 CYP2A7P20853 494 aa17.96■□□□□ 0.47
SSC4D-201ENST00000275560 CRATP43155 626 aa17.96■□□□□ 0.47
SSC4D-201ENST00000275560 CCL23P55773 120 aa17.96■□□□□ 0.47
SSC4D-201ENST00000275560 GPLD1P80108 840 aa17.96■□□□□ 0.47
SSC4D-201ENST00000275560 CSTF3Q12996 717 aaKnown RBP17.96■□□□□ 0.47
SSC4D-201ENST00000275560 MAP2K5Q13163 448 aa17.96■□□□□ 0.47
SSC4D-201ENST00000275560 PTGES3Q15185 160 aaKnown RBP17.96■□□□□ 0.47
SSC4D-201ENST00000275560 CXorf57Q6NSI4 855 aaKnown RBP17.96■□□□□ 0.47
SSC4D-201ENST00000275560 PAMR1Q6UXH9 720 aa17.96■□□□□ 0.47
SSC4D-201ENST00000275560 WDR53Q7Z5U6 358 aaPredicted RBP17.96■□□□□ 0.47
SSC4D-201ENST00000275560 GLCCI1Q86VQ1 547 aa17.96■□□□□ 0.47
SSC4D-201ENST00000275560 TMCO6Q96DC7 493 aa17.96■□□□□ 0.47
SSC4D-201ENST00000275560 OPALINQ96PE5 141 aa17.96■□□□□ 0.47
SSC4D-201ENST00000275560 CITED4Q96RK1 184 aa17.96■□□□□ 0.47
SSC4D-201ENST00000275560 HHATLQ9HCP6 504 aa17.96■□□□□ 0.47
SSC4D-201ENST00000275560 PCDHB11Q9Y5F2 797 aa17.96■□□□□ 0.47
SSC4D-201ENST00000275560 A0A0B4J293 547 aa17.96■□□□□ 0.47
SSC4D-201ENST00000275560 PRPS1L1P21108 318 aa17.96■□□□□ 0.47
SSC4D-201ENST00000275560 CCR7P32248 378 aa17.96■□□□□ 0.47
SSC4D-201ENST00000275560 NKX3-2P78367 333 aa17.96■□□□□ 0.47
SSC4D-201ENST00000275560 HKDC1Q2TB90 917 aa17.96■□□□□ 0.47
SSC4D-201ENST00000275560 LEXMQ3ZCV2 418 aa17.96■□□□□ 0.47
SSC4D-201ENST00000275560 MLIPQ5VWP3 458 aa17.96■□□□□ 0.47
SSC4D-201ENST00000275560 FRG2Q64ET8 278 aa17.96■□□□□ 0.47
SSC4D-201ENST00000275560 KLHL17Q6TDP4 642 aa17.96■□□□□ 0.47
SSC4D-201ENST00000275560 SERINC5Q86VE9 423 aa17.96■□□□□ 0.47
SSC4D-201ENST00000275560 RNF31Q96EP0 1072 aa17.96■□□□□ 0.47
SSC4D-201ENST00000275560 UROC1Q96N76 676 aa17.96■□□□□ 0.47
SSC4D-201ENST00000275560 FRG2BQ96QU4 278 aa17.96■□□□□ 0.47
SSC4D-201ENST00000275560 TCF25Q9BQ70 676 aa17.96■□□□□ 0.47
SSC4D-201ENST00000275560 ALPK3Q96L96 1907 aa17.96■□□□□ 0.47
SSC4D-201ENST00000275560 TRBC1P01850 177 aa17.95■□□□□ 0.46
SSC4D-201ENST00000275560 CD22P20273 847 aa17.95■□□□□ 0.46
SSC4D-201ENST00000275560 ITGALP20701 1170 aa17.95■□□□□ 0.46
SSC4D-201ENST00000275560 AOAHP28039 575 aa17.95■□□□□ 0.46
SSC4D-201ENST00000275560 CORO1AP31146 461 aaKnown RBP17.95■□□□□ 0.46
SSC4D-201ENST00000275560 CHIT1Q13231 466 aa17.95■□□□□ 0.46
SSC4D-201ENST00000275560 RGNQ15493 299 aa17.95■□□□□ 0.46
SSC4D-201ENST00000275560 CLLU1OSQ5K130 101 aa17.95■□□□□ 0.46
SSC4D-201ENST00000275560 TMPRSS11AQ6ZMR5 421 aa17.95■□□□□ 0.46
SSC4D-201ENST00000275560 ANKS3Q6ZW76 656 aa17.95■□□□□ 0.46
SSC4D-201ENST00000275560 ST13P5Q8NFI4 369 aaPredicted RBP17.95■□□□□ 0.46
SSC4D-201ENST00000275560 PIH1D2Q8WWB5 315 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms