RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 IFNA17P01571 189 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 HSD3B1P14060 373 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 EFNA1P20827 205 aaPredicted RBP8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 CHMP24386 653 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 ARL2P36404 184 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 SOX9P48436 509 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 CD47Q08722 323 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 MAP2K5Q13163 448 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 C9orf131Q5VYM1 1079 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 FAM124AQ86V42 546 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 NPAS3Q8IXF0 933 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 SCML4Q8N228 414 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 C1orf127Q8N9H9 656 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 FBXO15Q8NCQ5 510 aaPredicted RBP8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 NINJ1Q92982 152 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 TMEM68Q96MH6 324 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 ZNF649Q9BS31 505 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 TPT1P8Q9HAU6 139 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 POPDC3Q9HBV1 291 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 ST14Q9Y5Y6 855 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 VSTM5A8MXK1 200 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 DLX3O60479 287 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 DNAJB13P59910 316 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 PRAMEF14Q5SWL7 426 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 GPRC6AQ5T6X5 926 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 PRAMEF13Q5VWM6 474 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 SAMD12Q8N8I0 201 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 UPF1Q92900 1129 aaKnown RBP eCLIP8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 TMEM41AQ96HV5 264 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 PDZD7Q9H5P4 517 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 MCCC2Q9HCC0 563 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 Q9N2J8 555 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 CTPS2Q9NRF8 586 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 PAK1IP1Q9NWT1 392 aaPredicted RBP8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 PAQR5Q9NXK6 330 aaPredicted RBP8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 CD84Q9UIB8 345 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 C2orf92A0A1B0GVN3 265 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 CDKN2CP42773 168 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 CAP1Q01518 475 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 IRF5Q13568 498 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 WDR53Q7Z5U6 358 aaPredicted RBP8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 SYNPOQ8N3V7 929 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 CAMKVQ8NCB2 501 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 IL31RAQ8NI17 732 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 DERL2Q9GZP9 239 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 CPNE5Q9HCH3 593 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 FAAHO00519 579 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 RFPL2O75678 378 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 PABPC4LP0CB38 370 aaKnown RBP8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 UNGP13051 313 aaPredicted RBP8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 POU4F2Q12837 409 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 KCNC3Q14003 757 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 CHRFAM7AQ494W8 412 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 NKAPLQ5M9Q1 402 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 KANK2Q63ZY3 851 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 AMZ2Q86W34 360 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 C1orf52Q8N6N3 182 aaKnown RBP8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 PSMG2Q969U7 264 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 OTUB2Q96DC9 234 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 LRCH3Q96II8 777 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 TCEAL7Q9BRU2 100 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 ARL6Q9H0F7 186 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 FCF1Q9Y324 198 aaKnown RBP8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 A0A1W2PQ45 241 aaPredicted RBP8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 A0A1W2PQY0 241 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 CXCL14O95715 111 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 OPN1SWP03999 348 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 CSF2P04141 144 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 EPHX1P07099 455 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 HLCSP50747 726 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 FXYD6P3P58550 94 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 RHBDL3P58872 404 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 RPS3AP61247 264 aaKnown RBP8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 NFE2L1Q14494 772 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 KCNJ11Q14654 390 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 CYBRD1Q53TN4 286 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 ATG9BQ674R7 924 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 PAQR3Q6TCH7 311 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 GPC2Q8N158 579 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 PYROXD2Q8N2H3 581 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 CHCHD4Q8N4Q1 142 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 ZSCAN1Q8NBB4 408 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 AVL9Q8NBF6 648 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 OR10T2Q8NGX3 314 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 EIF5A2Q9GZV4 153 aaKnown RBP8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 FAM198AQ9UFP1 575 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 ATRNO75882 1429 aa8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 TREHO43280 583 aa8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 CREBL2O60519 120 aaPredicted RBP8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 OAZ2O95190 189 aa8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 GTF2F2P13984 249 aa8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 BLKP51451 505 aa8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 ATXN7L3Q14CW9 347 aaPredicted RBP8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 FAM198BQ6UWH4 519 aa8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 C6orf89Q6UWU4 347 aa8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 SMARCD2Q92925 531 aa8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 GPR22Q99680 433 aa8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 LIN28AQ9H9Z2 209 aaKnown RBP8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 GRHPRQ9UBQ7 328 aa8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 ZNF536O15090 1300 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms