RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 SMPDL3AQ92484 453 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 NINJ1Q92982 152 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 ZNF285Q96NJ3 590 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 RNF38Q9H0F5 515 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 SMOC2Q9H3U7 446 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 SH3PXD2BA1X283 911 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 VSTM5A8MXK1 200 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 CD48P09326 243 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 GFOD2Q3B7J2 385 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 SPIN3Q5JUX0 258 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 MBLAC2Q68D91 279 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 JAGN1Q8N5M9 183 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 PSMG2Q969U7 264 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 ZNF382Q96SR6 550 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 ORAI3Q9BRQ5 295 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 SLC2A11Q9BYW1 496 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 RNF121Q9H920 327 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 SLC39A1Q9NY26 324 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 A0A1B0GVI7 797 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 ZNF878C9JN71 531 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 RGS9O75916 674 aaPredicted RBP7.74□□□□□ -1.17
LIMD1-201ENST00000273317 GP1BBP13224 206 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 PTPN2P17706 415 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 LHCGRP22888 699 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 RPL10P27635 214 aaKnown RBP7.74□□□□□ -1.17
LIMD1-201ENST00000273317 CDK6Q00534 326 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 GHRHRQ02643 423 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 DSC3Q14574 896 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 SLC8B1Q6J4K2 584 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 GET4Q7L5D6 327 aaPredicted RBP7.74□□□□□ -1.17
LIMD1-201ENST00000273317 COMTD1Q86VU5 262 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 ZSWIM9Q86XI8 627 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 GPR22Q99680 433 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 NARSO43776 548 aaKnown RBP7.74□□□□□ -1.17
LIMD1-201ENST00000273317 MT-ND2P03891 347 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 UQCRC2P22695 453 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 PGDP52209 483 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 RPA4Q13156 261 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 SYT16Q17RD7 645 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 ANKDD1AQ495B1 522 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 VARS2Q5ST30 1063 aaKnown RBP7.74□□□□□ -1.17
LIMD1-201ENST00000273317 PLEKHG7Q6ZR37 379 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 FKBP10Q96AY3 582 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 PIP5K1AQ99755 562 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 LPIN3Q9BQK8 851 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 AGAP5A6NIR3 686 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 TNFRSF10BO14763 440 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 MT-CYBP00156 380 aaPredicted RBP7.74□□□□□ -1.17
LIMD1-201ENST00000273317 MATN1P21941 496 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 TAS2R39P59534 338 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 GK3PQ14409 553 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 DHRS1Q96LJ7 313 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 IL4I1Q96RQ9 567 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 POLMQ9NP87 494 aaPredicted RBP7.74□□□□□ -1.17
LIMD1-201ENST00000273317 ZCCHC3Q9NUD5 404 aaKnown RBP7.74□□□□□ -1.17
LIMD1-201ENST00000273317 TAS2R10Q9NYW0 307 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 KCNN3Q9UGI6 736 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 UTS2RQ9UKP6 389 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 FCF1Q9Y324 198 aaKnown RBP7.74□□□□□ -1.17
LIMD1-201ENST00000273317 A8MT66 165 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 H3BUI4 141 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 EEDO75530 441 aaKnown RBP7.74□□□□□ -1.17
LIMD1-201ENST00000273317 OAS1P00973 400 aaKnown RBP7.74□□□□□ -1.17
LIMD1-201ENST00000273317 S100PP25815 95 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 ACTA2P62736 377 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 ACTG2P63267 376 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 CHERPQ8IWX8 916 aaKnown RBP7.74□□□□□ -1.17
LIMD1-201ENST00000273317 NPAS3Q8IXF0 933 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 ZNF101Q8IZC7 436 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 SCGB1C1Q8TD33 95 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 TFAP2BQ92481 460 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 KIAA1191Q96A73 305 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 MAGIXQ9H6Y5 334 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 RRAGCQ9HB90 399 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 C19orf25Q9UFG5 118 aaPredicted RBP7.74□□□□□ -1.17
LIMD1-201ENST00000273317 LAMP5Q9UJQ1 280 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 TMPRSS11EQ9UL52 423 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 CAPN5O15484 640 aaPredicted RBP7.74□□□□□ -1.17
LIMD1-201ENST00000273317 TREHO43280 583 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 SCGB1D2O95969 90 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 PLA2G16P53816 162 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 GNMTQ14749 295 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 BATFQ16520 125 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 RELL1Q8IUW5 271 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 NAT8LQ8N9F0 302 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 GIMAP5Q96F15 307 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 NECAB3Q96P71 396 aaPredicted RBP7.74□□□□□ -1.17
LIMD1-201ENST00000273317 UNKLQ9H9P5 680 aaKnown RBP7.74□□□□□ -1.17
LIMD1-201ENST00000273317 HCN2Q9UL51 889 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 C10orf71Q711Q0 1435 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 PRKYO43930 277 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 DUSP11O75319 330 aaKnown RBP7.74□□□□□ -1.17
LIMD1-201ENST00000273317 GDF10P55107 478 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 DCBLD1Q8N8Z6 715 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 PFDN5Q99471 154 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 IL12RB2Q99665 862 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 RPF2Q9H7B2 306 aaKnown RBP7.74□□□□□ -1.17
LIMD1-201ENST00000273317 TEX13DA0A0J9YY54 714 aaPredicted RBP7.73□□□□□ -1.17
LIMD1-201ENST00000273317 SEPT4O43236 478 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 CREG1O75629 220 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms