RNA–Protein interactions for RNA: ENST00000270142.10

SOD1-201, Transcript of superoxide dismutase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOD1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-201ENST00000270142 NSDHLQ15738 373 aa14.36□□□□□ -0.11
SOD1-201ENST00000270142 MSS51Q4VC12 460 aa14.36□□□□□ -0.11
SOD1-201ENST00000270142 SPINK14Q6IE38 97 aa14.36□□□□□ -0.11
SOD1-201ENST00000270142 MRGPRGQ86SM5 289 aa14.36□□□□□ -0.11
SOD1-201ENST00000270142 CNTN4Q8IWV2 1026 aa14.36□□□□□ -0.11
SOD1-201ENST00000270142 ZNF808Q8N4W9 903 aaPredicted RBP14.36□□□□□ -0.11
SOD1-201ENST00000270142 AFAP1L2Q8N4X5 818 aa14.36□□□□□ -0.11
SOD1-201ENST00000270142 ABHD11Q8NFV4 315 aa14.36□□□□□ -0.11
SOD1-201ENST00000270142 OR56A3Q8NH54 315 aa14.36□□□□□ -0.11
SOD1-201ENST00000270142 MOCOSQ96EN8 888 aa14.36□□□□□ -0.11
SOD1-201ENST00000270142 SCMH1Q96GD3 660 aa14.36□□□□□ -0.11
SOD1-201ENST00000270142 HIST1H2AHQ96KK5 128 aa14.36□□□□□ -0.11
SOD1-201ENST00000270142 OR4K3Q96R72 315 aa14.36□□□□□ -0.11
SOD1-201ENST00000270142 OR1F2PQ96R84 312 aa14.36□□□□□ -0.11
SOD1-201ENST00000270142 LPAR4Q99677 370 aa14.36□□□□□ -0.11
SOD1-201ENST00000270142 HIST1H2AJQ99878 128 aa14.36□□□□□ -0.11
SOD1-201ENST00000270142 HAUS8Q9BT25 410 aa14.36□□□□□ -0.11
SOD1-201ENST00000270142 H2AFJQ9BTM1 129 aa14.36□□□□□ -0.11
SOD1-201ENST00000270142 SARGQ9BW04 601 aa14.36□□□□□ -0.11
SOD1-201ENST00000270142 FAM129AQ9BZQ8 928 aa14.36□□□□□ -0.11
SOD1-201ENST00000270142 SPNS1Q9H2V7 528 aa14.36□□□□□ -0.11
SOD1-201ENST00000270142 KLHL1Q9NR64 748 aa14.36□□□□□ -0.11
SOD1-201ENST00000270142 GABRR3A8MPY1 467 aa14.35□□□□□ -0.11
SOD1-201ENST00000270142 MAGEB17A8MXT2 336 aa14.35□□□□□ -0.11
SOD1-201ENST00000270142 FAM227AF5H4B4 570 aa14.35□□□□□ -0.11
SOD1-201ENST00000270142 DNALI1O14645 258 aaPredicted RBP14.35□□□□□ -0.11
SOD1-201ENST00000270142 TTI1O43156 1089 aa14.35□□□□□ -0.11
SOD1-201ENST00000270142 OR1F1O43749 312 aa14.35□□□□□ -0.11
SOD1-201ENST00000270142 SLC19A2O60779 497 aa14.35□□□□□ -0.11
SOD1-201ENST00000270142 FHP07954 510 aa14.35□□□□□ -0.11
SOD1-201ENST00000270142 CD96P40200 585 aa14.35□□□□□ -0.11
SOD1-201ENST00000270142 CCR8P51685 355 aa14.35□□□□□ -0.11
SOD1-201ENST00000270142 SLC26A5P58743 744 aa14.35□□□□□ -0.11
SOD1-201ENST00000270142 OLR1P78380 273 aa14.35□□□□□ -0.11
SOD1-201ENST00000270142 ADORA2A-AS1P86434 159 aa14.35□□□□□ -0.11
SOD1-201ENST00000270142 ACTN3Q08043 901 aaPredicted RBP14.35□□□□□ -0.11
SOD1-201ENST00000270142 PDAP1Q13442 181 aaKnown RBP14.35□□□□□ -0.11
SOD1-201ENST00000270142 HERC3Q15034 1050 aa14.35□□□□□ -0.11
SOD1-201ENST00000270142 PPP1R7Q15435 360 aa14.35□□□□□ -0.11
SOD1-201ENST00000270142 C3AR1Q16581 482 aa14.35□□□□□ -0.11
SOD1-201ENST00000270142 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.35□□□□□ -0.116e-7■■■■□ 26.5
SOD1-201ENST00000270142 SPANXN3Q5MJ09 141 aa14.35□□□□□ -0.11
SOD1-201ENST00000270142 CATSPEREQ5SY80 951 aa14.35□□□□□ -0.11
SOD1-201ENST00000270142 DUPD1Q68J44 220 aa14.35□□□□□ -0.11
SOD1-201ENST00000270142 RPTNQ6XPR3 784 aa14.35□□□□□ -0.11
SOD1-201ENST00000270142 BNC2Q6ZN30 1099 aaPredicted RBP14.35□□□□□ -0.11
SOD1-201ENST00000270142 IGDCC3Q8IVU1 814 aa14.35□□□□□ -0.11
SOD1-201ENST00000270142 OR4K1Q8NGD4 311 aa14.35□□□□□ -0.11
SOD1-201ENST00000270142 ACTRT1Q8TDG2 376 aa14.35□□□□□ -0.11
SOD1-201ENST00000270142 CERS2Q96G23 380 aa14.35□□□□□ -0.11
SOD1-201ENST00000270142 GPR137Q96N19 417 aa14.35□□□□□ -0.11
SOD1-201ENST00000270142 OSBPL9Q96SU4 736 aa14.35□□□□□ -0.11
SOD1-201ENST00000270142 UTP23Q9BRU9 249 aaKnown RBP14.35□□□□□ -0.11
SOD1-201ENST00000270142 PLAC1Q9HBJ0 212 aa14.35□□□□□ -0.11
SOD1-201ENST00000270142 ARL15Q9NXU5 204 aa14.35□□□□□ -0.11
SOD1-201ENST00000270142 TINAGQ9UJW2 476 aa14.35□□□□□ -0.11
SOD1-201ENST00000270142 SCN2AQ99250 2005 aa14.34□□□□□ -0.11
SOD1-201ENST00000270142 SCN3AQ9NY46 2000 aa14.34□□□□□ -0.11
SOD1-201ENST00000270142 ASPDHA6ND91 283 aa14.34□□□□□ -0.11
SOD1-201ENST00000270142 GALR3O60755 368 aaPredicted RBP14.34□□□□□ -0.11
SOD1-201ENST00000270142 TTC4O95801 387 aa14.34□□□□□ -0.11
SOD1-201ENST00000270142 SERPIND1P05546 499 aa14.34□□□□□ -0.11
SOD1-201ENST00000270142 ALOX12P18054 663 aa14.34□□□□□ -0.11
SOD1-201ENST00000270142 IL10P22301 178 aa14.34□□□□□ -0.11
SOD1-201ENST00000270142 HTR1EP28566 365 aa14.34□□□□□ -0.11
SOD1-201ENST00000270142 OR4D2P58180 307 aa14.34□□□□□ -0.11
SOD1-201ENST00000270142 DEFB134Q4QY38 66 aa14.34□□□□□ -0.11
SOD1-201ENST00000270142 TEDDM1Q5T9Z0 273 aa14.34□□□□□ -0.11
SOD1-201ENST00000270142 HECTD2Q5U5R9 776 aa14.34□□□□□ -0.11
SOD1-201ENST00000270142 MTFR2Q6P444 385 aa14.34□□□□□ -0.11
SOD1-201ENST00000270142 KIAA0408Q6ZU52 694 aa14.34□□□□□ -0.11
SOD1-201ENST00000270142 GALNTL5Q7Z4T8 443 aa14.34□□□□□ -0.11
SOD1-201ENST00000270142 SLC35F6Q8N357 371 aa14.34□□□□□ -0.11
SOD1-201ENST00000270142 SLC5A8Q8N695 610 aa14.34□□□□□ -0.11
SOD1-201ENST00000270142 GPATCH11Q8N954 259 aa14.34□□□□□ -0.11
SOD1-201ENST00000270142 GABPB2Q8TAK5 448 aaPredicted RBP14.34□□□□□ -0.11
SOD1-201ENST00000270142 TBC1D20Q96BZ9 403 aa14.34□□□□□ -0.11
SOD1-201ENST00000270142 SNF8Q96H20 258 aa14.34□□□□□ -0.11
SOD1-201ENST00000270142 FRMD6Q96NE9 622 aa14.34□□□□□ -0.11
SOD1-201ENST00000270142 OLFM1Q99784 485 aa14.34□□□□□ -0.11
SOD1-201ENST00000270142 TSPAN10Q9H1Z9 355 aaPredicted RBP14.34□□□□□ -0.11
SOD1-201ENST00000270142 CDCP1Q9H5V8 836 aa14.34□□□□□ -0.11
SOD1-201ENST00000270142 ASIC3Q9UHC3 531 aa14.34□□□□□ -0.11
SOD1-201ENST00000270142 IKZF3Q9UKT9 509 aa14.34□□□□□ -0.11
SOD1-201ENST00000270142 MYO7BQ6PIF6 2116 aa14.33□□□□□ -0.11
SOD1-201ENST00000270142 CSMD2Q7Z408 3487 aa14.33□□□□□ -0.12
SOD1-201ENST00000270142 GOLGA6L10A0A0M3HER8 536 aa14.33□□□□□ -0.12
SOD1-201ENST00000270142 TRBC2A0A5B9 178 aa14.33□□□□□ -0.12
SOD1-201ENST00000270142 CTAGE15A4D2H0 777 aa14.33□□□□□ -0.12
SOD1-201ENST00000270142 PABPN1LA6NDY0 278 aaKnown RBP14.33□□□□□ -0.12
SOD1-201ENST00000270142 CHST10O43529 356 aa14.33□□□□□ -0.12
SOD1-201ENST00000270142 NRDCO43847 1150 aa14.33□□□□□ -0.12
SOD1-201ENST00000270142 NEURL1O76050 574 aa14.33□□□□□ -0.12
SOD1-201ENST00000270142 GUCA1CO95843 209 aa14.33□□□□□ -0.12
SOD1-201ENST00000270142 ZNF888P0CJ79 500 aaPredicted RBP14.33□□□□□ -0.12
SOD1-201ENST00000270142 CD46P15529 392 aa14.33□□□□□ -0.12
SOD1-201ENST00000270142 EEF1DP29692 281 aaKnown RBP14.33□□□□□ -0.12
SOD1-201ENST00000270142 SCTRP47872 440 aa14.33□□□□□ -0.12
SOD1-201ENST00000270142 CASP6P55212 293 aa14.33□□□□□ -0.12
SOD1-201ENST00000270142 AP1S2P56377 157 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms