RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 F2RL3Q96RI0 385 aa13.49□□□□□ -0.25
SS18-201ENST00000269137 ABCD2Q9UBJ2 740 aa13.49□□□□□ -0.25
SS18-201ENST00000269137 WBP11Q9Y2W2 641 aaKnown RBP13.49□□□□□ -0.25
SS18-201ENST00000269137 GNG14A0A1W2PPG7 69 aa13.48□□□□□ -0.25
SS18-201ENST00000269137 LRIT2A6NDA9 550 aa13.48□□□□□ -0.25
SS18-201ENST00000269137 LILRA5A6NI73 299 aa13.48□□□□□ -0.25
SS18-201ENST00000269137 SAP18O00422 153 aaKnown RBP13.48□□□□□ -0.25
SS18-201ENST00000269137 PLPP1O14494 284 aa13.48□□□□□ -0.25
SS18-201ENST00000269137 PPM1DO15297 605 aa13.48□□□□□ -0.25
SS18-201ENST00000269137 ZW10O43264 779 aa13.48□□□□□ -0.25
SS18-201ENST00000269137 PDE5AO76074 875 aa13.48□□□□□ -0.25
SS18-201ENST00000269137 KLHL18O94889 574 aa13.48□□□□□ -0.25
SS18-201ENST00000269137 ATP6V1G2O95670 118 aa13.48□□□□□ -0.25
SS18-201ENST00000269137 CNR2P34972 360 aa13.48□□□□□ -0.25
SS18-201ENST00000269137 ARFIP1P53367 373 aa13.48□□□□□ -0.25
SS18-201ENST00000269137 MAZP56270 477 aaKnown RBP13.48□□□□□ -0.25
SS18-201ENST00000269137 RPS15AP62244 130 aaKnown RBP13.48□□□□□ -0.25
SS18-201ENST00000269137 PHC1P78364 1004 aa13.48□□□□□ -0.25
SS18-201ENST00000269137 CEACAM7Q14002 265 aa13.48□□□□□ -0.25
SS18-201ENST00000269137 ADPRMQ3LIE5 342 aa13.48□□□□□ -0.25
SS18-201ENST00000269137 SPATS1Q496A3 300 aa13.48□□□□□ -0.25
SS18-201ENST00000269137 SAMD4BQ5PRF9 694 aaKnown RBP13.48□□□□□ -0.25
SS18-201ENST00000269137 KLHL35Q6PF15 583 aa13.48□□□□□ -0.25
SS18-201ENST00000269137 SLC2A7Q6PXP3 512 aa13.48□□□□□ -0.25
SS18-201ENST00000269137 DLEU7Q6UYE1 221 aa13.48□□□□□ -0.25
SS18-201ENST00000269137 PAGE2Q7Z2X7 111 aa13.48□□□□□ -0.25
SS18-201ENST00000269137 DNAJB8Q8NHS0 232 aa13.48□□□□□ -0.25
SS18-201ENST00000269137 GTF2H4Q92759 462 aa13.48□□□□□ -0.25
SS18-201ENST00000269137 RGMAQ96B86 450 aa13.48□□□□□ -0.25
SS18-201ENST00000269137 QRFPRQ96P65 431 aa13.48□□□□□ -0.25
SS18-201ENST00000269137 OR52E6Q96RD3 313 aa13.48□□□□□ -0.25
SS18-201ENST00000269137 ZNF717Q9BY31 904 aaPredicted RBP13.48□□□□□ -0.25
SS18-201ENST00000269137 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.48□□□□□ -0.25
SS18-201ENST00000269137 MYNNQ9NPC7 610 aa13.48□□□□□ -0.25
SS18-201ENST00000269137 TMEM74BQ9NUR3 256 aa13.48□□□□□ -0.25
SS18-201ENST00000269137 UCKL1Q9NWZ5 548 aa13.48□□□□□ -0.25
SS18-201ENST00000269137 ADAM29Q9UKF5 820 aa13.48□□□□□ -0.25
SS18-201ENST00000269137 KLHL20Q9Y2M5 609 aa13.48□□□□□ -0.25
SS18-201ENST00000269137 SNX11Q9Y5W9 270 aa13.48□□□□□ -0.25
SS18-201ENST00000269137 NDUFS4O43181 175 aa13.48□□□□□ -0.25
SS18-201ENST00000269137 LRATO95237 230 aa13.48□□□□□ -0.25
SS18-201ENST00000269137 KLK1P06870 262 aa13.48□□□□□ -0.25
SS18-201ENST00000269137 ME2P23368 584 aa13.48□□□□□ -0.25
SS18-201ENST00000269137 SLC6A2P23975 617 aa13.48□□□□□ -0.25
SS18-201ENST00000269137 BSGP35613 385 aa13.48□□□□□ -0.25
SS18-201ENST00000269137 KIR3DL1P43629 444 aa13.48□□□□□ -0.25
SS18-201ENST00000269137 ACTR3P61158 418 aa13.48□□□□□ -0.25
SS18-201ENST00000269137 BNC1Q01954 994 aa13.48□□□□□ -0.25
SS18-201ENST00000269137 PWP1Q13610 501 aa13.48□□□□□ -0.25
SS18-201ENST00000269137 KPNB1Q14974 876 aaKnown RBP13.48□□□□□ -0.25
SS18-201ENST00000269137 MAPKAPK3Q16644 382 aa13.48□□□□□ -0.25
SS18-201ENST00000269137 UGT8Q16880 541 aa13.48□□□□□ -0.25
SS18-201ENST00000269137 DEFB133Q30KQ1 61 aa13.48□□□□□ -0.25
SS18-201ENST00000269137 C1orf146Q5VVC0 180 aa13.48□□□□□ -0.25
SS18-201ENST00000269137 PEAR1Q5VY43 1037 aaPredicted RBP13.48□□□□□ -0.25
SS18-201ENST00000269137 FIGLAQ6QHK4 219 aa13.48□□□□□ -0.25
SS18-201ENST00000269137 CAMKMTQ7Z624 323 aa13.48□□□□□ -0.25
SS18-201ENST00000269137 DHDDSQ86SQ9 333 aa13.48□□□□□ -0.25
SS18-201ENST00000269137 TRIM73Q86UV7 250 aa13.48□□□□□ -0.25
SS18-201ENST00000269137 EFCAB3Q8N7B9 438 aa13.48□□□□□ -0.25
SS18-201ENST00000269137 OR8J2Q8NGG1 315 aa13.48□□□□□ -0.25
SS18-201ENST00000269137 THAP11Q96EK4 314 aa13.48□□□□□ -0.25
SS18-201ENST00000269137 ELF4Q99607 663 aaPredicted RBP13.48□□□□□ -0.25
SS18-201ENST00000269137 SLC39A3Q9BRY0 314 aa13.48□□□□□ -0.25
SS18-201ENST00000269137 IL1RL2Q9HB29 575 aa13.48□□□□□ -0.25
SS18-201ENST00000269137 ADA2Q9NZK5 511 aa13.48□□□□□ -0.25
SS18-201ENST00000269137 CD300AQ9UGN4 299 aa13.48□□□□□ -0.25
SS18-201ENST00000269137 POMPQ9Y244 141 aa13.48□□□□□ -0.25
SS18-201ENST00000269137 MAN2B2Q9Y2E5 1009 aa13.48□□□□□ -0.25
SS18-201ENST00000269137 ARID1BQ8NFD5 2236 aaPredicted RBP13.47□□□□□ -0.25
SS18-201ENST00000269137 C15orf38-AP3S2A0A0A6YYH1 394 aa13.47□□□□□ -0.25
SS18-201ENST00000269137 A0A0J9YY10 115 aa13.47□□□□□ -0.25
SS18-201ENST00000269137 TRIM38O00635 465 aa13.47□□□□□ -0.25
SS18-201ENST00000269137 SCAMP2O15127 329 aaKnown RBP13.47□□□□□ -0.25
SS18-201ENST00000269137 CAPN5O15484 640 aaPredicted RBP13.47□□□□□ -0.25
SS18-201ENST00000269137 AKAP10O43572 662 aa13.47□□□□□ -0.25
SS18-201ENST00000269137 SDC3O75056 442 aa13.47□□□□□ -0.25
SS18-201ENST00000269137 HOXB3P14651 431 aaPredicted RBP13.47□□□□□ -0.25
SS18-201ENST00000269137 MAGP20916 626 aa13.47□□□□□ -0.25
SS18-201ENST00000269137 TPP2P29144 1249 aaPredicted RBP13.47□□□□□ -0.25
SS18-201ENST00000269137 HPCAL1P37235 193 aa13.47□□□□□ -0.25
SS18-201ENST00000269137 GSTM5P46439 218 aa13.47□□□□□ -0.25
SS18-201ENST00000269137 ARRB1P49407 418 aaPredicted RBP13.47□□□□□ -0.25
SS18-201ENST00000269137 SLC7A2P52569 658 aa13.47□□□□□ -0.25
SS18-201ENST00000269137 HNRNPFP52597 415 aaKnown RBP13.47□□□□□ -0.25
SS18-201ENST00000269137 HYAL2Q12891 473 aa13.47□□□□□ -0.25
SS18-201ENST00000269137 C14orf28Q4W4Y0 310 aa13.47□□□□□ -0.25
SS18-201ENST00000269137 FCRL6Q6DN72 434 aa13.47□□□□□ -0.25
SS18-201ENST00000269137 FBXO42Q6P3S6 717 aa13.47□□□□□ -0.25
SS18-201ENST00000269137 RIPOR1Q6ZS17 1223 aa13.47□□□□□ -0.25
SS18-201ENST00000269137 IKBIPQ70UQ0 350 aa13.47□□□□□ -0.25
SS18-201ENST00000269137 UBE3DQ7Z6J8 389 aa13.47□□□□□ -0.25
SS18-201ENST00000269137 ARPINQ7Z6K5 226 aa13.47□□□□□ -0.25
SS18-201ENST00000269137 GPR180Q86V85 440 aa13.47□□□□□ -0.25
SS18-201ENST00000269137 ZNF761Q86XN6 746 aaPredicted RBP13.47□□□□□ -0.25
SS18-201ENST00000269137 SLC15A3Q8IY34 581 aa13.47□□□□□ -0.25
SS18-201ENST00000269137 C16orf78Q8WTQ4 265 aa13.47□□□□□ -0.25
SS18-201ENST00000269137 GFM2Q969S9 779 aaKnown RBP13.47□□□□□ -0.25
SS18-201ENST00000269137 COQ8BQ96D53 544 aa13.47□□□□□ -0.25
SS18-201ENST00000269137 PRPF18Q99633 342 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms