RNA–Protein interactions for RNA: ENST00000268720.9

CPNE7-201, Transcript of copine 7, humanhuman

TSL 1 (best) BASIC

Gene CPNE7, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-201ENST00000268720 PCDHGA12O60330 932 aa18.36■□□□□ 0.53
CPNE7-201ENST00000268720 SLC16A8O95907 504 aa18.36■□□□□ 0.53
CPNE7-201ENST00000268720 WNT3P56703 355 aa18.36■□□□□ 0.53
CPNE7-201ENST00000268720 SLC35A2P78381 396 aa18.36■□□□□ 0.53
CPNE7-201ENST00000268720 DOC2AQ14183 400 aa18.36■□□□□ 0.53
CPNE7-201ENST00000268720 INAVAQ3KP66 663 aa18.36■□□□□ 0.53
CPNE7-201ENST00000268720 TTC23LQ6PF05 361 aa18.36■□□□□ 0.53
CPNE7-201ENST00000268720 KLHL17Q6TDP4 642 aa18.36■□□□□ 0.53
CPNE7-201ENST00000268720 PAGE2Q7Z2X7 111 aa18.36■□□□□ 0.53
CPNE7-201ENST00000268720 MFSD4AQ8N468 514 aa18.36■□□□□ 0.53
CPNE7-201ENST00000268720 SPPL2AQ8TCT8 520 aa18.36■□□□□ 0.53
CPNE7-201ENST00000268720 LRRC3BQ96PB8 259 aa18.36■□□□□ 0.53
CPNE7-201ENST00000268720 MAGIXQ9H6Y5 334 aa18.36■□□□□ 0.53
CPNE7-201ENST00000268720 RUBCNLQ9H714 662 aa18.36■□□□□ 0.53
CPNE7-201ENST00000268720 RMND5AQ9H871 391 aa18.36■□□□□ 0.53
CPNE7-201ENST00000268720 SCN2BO60939 215 aa18.35■□□□□ 0.53
CPNE7-201ENST00000268720 CYP2A6P11509 494 aaPredicted RBP18.35■□□□□ 0.53
CPNE7-201ENST00000268720 PTGER1P34995 402 aa18.35■□□□□ 0.53
CPNE7-201ENST00000268720 IDH2P48735 452 aaKnown RBP18.35■□□□□ 0.53
CPNE7-201ENST00000268720 MADCAM1Q13477 382 aa18.35■□□□□ 0.53
CPNE7-201ENST00000268720 ZNF77Q15935 545 aa18.35■□□□□ 0.53
CPNE7-201ENST00000268720 RAVER1Q8IY67 606 aaKnown RBP18.35■□□□□ 0.53
CPNE7-201ENST00000268720 ZZZ3Q8IYH5 903 aa18.35■□□□□ 0.53
CPNE7-201ENST00000268720 WDR20Q8TBZ3 569 aa18.35■□□□□ 0.53
CPNE7-201ENST00000268720 CIDECQ96AQ7 238 aaPredicted RBP18.35■□□□□ 0.53
CPNE7-201ENST00000268720 YIPF6Q96EC8 236 aa18.35■□□□□ 0.53
CPNE7-201ENST00000268720 WRAP53Q9BUR4 548 aaKnown RBP18.35■□□□□ 0.53
CPNE7-201ENST00000268720 KRT84Q9NSB2 600 aa18.35■□□□□ 0.53
CPNE7-201ENST00000268720 THUMPD1Q9NXG2 353 aaKnown RBP18.35■□□□□ 0.53
CPNE7-201ENST00000268720 RBMX2Q9Y388 322 aaKnown RBP18.35■□□□□ 0.53
CPNE7-201ENST00000268720 GNG14A0A1W2PPG7 69 aa18.35■□□□□ 0.53
CPNE7-201ENST00000268720 AGTRAPQ6RW13 159 aa18.35■□□□□ 0.53
CPNE7-201ENST00000268720 RASGRP3Q8IV61 690 aa18.35■□□□□ 0.53
CPNE7-201ENST00000268720 NAGSQ8N159 534 aa18.35■□□□□ 0.53
CPNE7-201ENST00000268720 MRPL43Q8N983 215 aaKnown RBP18.35■□□□□ 0.53
CPNE7-201ENST00000268720 OR52E4Q8NGH9 312 aa18.35■□□□□ 0.53
CPNE7-201ENST00000268720 HPS1Q92902 700 aa18.35■□□□□ 0.53
CPNE7-201ENST00000268720 ACAT2Q9BWD1 397 aa18.35■□□□□ 0.53
CPNE7-201ENST00000268720 GULP1Q9UBP9 304 aa18.35■□□□□ 0.53
CPNE7-201ENST00000268720 EVPLLA8MZ36 301 aa18.34■□□□□ 0.53
CPNE7-201ENST00000268720 SLC16A5O15375 505 aa18.34■□□□□ 0.53
CPNE7-201ENST00000268720 GSTM1P09488 218 aa18.34■□□□□ 0.53
CPNE7-201ENST00000268720 ITGAMP11215 1152 aa18.34■□□□□ 0.53
CPNE7-201ENST00000268720 GANABQ14697 944 aaKnown RBP18.34■□□□□ 0.53
CPNE7-201ENST00000268720 SLC44A2Q8IWA5 706 aaPredicted RBP18.34■□□□□ 0.53
CPNE7-201ENST00000268720 FBLIM1Q8WUP2 373 aa18.34■□□□□ 0.53
CPNE7-201ENST00000268720 BTN2A2Q8WVV5 523 aa18.34■□□□□ 0.53
CPNE7-201ENST00000268720 STOX2Q9P2F5 926 aaPredicted RBP18.34■□□□□ 0.53
CPNE7-201ENST00000268720 TMED5Q9Y3A6 229 aa18.34■□□□□ 0.53
CPNE7-201ENST00000268720 PSIP1O75475 530 aaKnown RBP18.34■□□□□ 0.53
CPNE7-201ENST00000268720 FABP3P05413 133 aa18.34■□□□□ 0.53
CPNE7-201ENST00000268720 ETFAP13804 333 aa18.34■□□□□ 0.53
CPNE7-201ENST00000268720 PTPN2P17706 415 aa18.34■□□□□ 0.53
CPNE7-201ENST00000268720 RRM2P31350 389 aa18.34■□□□□ 0.53
CPNE7-201ENST00000268720 KDELR2P33947 212 aa18.34■□□□□ 0.53
CPNE7-201ENST00000268720 CRATP43155 626 aa18.34■□□□□ 0.53
CPNE7-201ENST00000268720 SEPHS1P49903 392 aa18.34■□□□□ 0.53
CPNE7-201ENST00000268720 EPHA5P54756 1037 aa18.34■□□□□ 0.53
CPNE7-201ENST00000268720 ABHD18Q0P651 414 aa18.34■□□□□ 0.53
CPNE7-201ENST00000268720 VMACQ2NL98 169 aa18.34■□□□□ 0.53
CPNE7-201ENST00000268720 CLIP4Q8N3C7 705 aa18.34■□□□□ 0.53
CPNE7-201ENST00000268720 TRAM1L1Q8N609 369 aa18.34■□□□□ 0.53
CPNE7-201ENST00000268720 DNASE1L2Q92874 299 aa18.34■□□□□ 0.53
CPNE7-201ENST00000268720 TMEM159Q96B96 161 aa18.34■□□□□ 0.53
CPNE7-201ENST00000268720 BTBD2Q9BX70 525 aa18.34■□□□□ 0.53
CPNE7-201ENST00000268720 WDR12Q9GZL7 423 aaKnown RBP18.34■□□□□ 0.53
CPNE7-201ENST00000268720 DUSP21Q9H596 190 aa18.34■□□□□ 0.53
CPNE7-201ENST00000268720 VPS29Q9UBQ0 182 aa18.34■□□□□ 0.53
CPNE7-201ENST00000268720 IL36AQ9UHA7 158 aa18.34■□□□□ 0.53
CPNE7-201ENST00000268720 FZD4Q9ULV1 537 aa18.34■□□□□ 0.53
CPNE7-201ENST00000268720 TPRKBQ9Y3C4 175 aa18.34■□□□□ 0.53
CPNE7-201ENST00000268720 PCDHGA4Q9Y5G9 962 aa18.34■□□□□ 0.53
CPNE7-201ENST00000268720 GABRR3A8MPY1 467 aa18.33■□□□□ 0.53
CPNE7-201ENST00000268720 WNT9AO14904 365 aa18.33■□□□□ 0.53
CPNE7-201ENST00000268720 KPNA5O15131 536 aa18.33■□□□□ 0.53
CPNE7-201ENST00000268720 EPCAMP16422 314 aa18.33■□□□□ 0.53
CPNE7-201ENST00000268720 DCDC1P59894 354 aa18.33■□□□□ 0.53
CPNE7-201ENST00000268720 TMEM115Q12893 351 aaPredicted RBP18.33■□□□□ 0.53
CPNE7-201ENST00000268720 MTAPQ13126 283 aa18.33■□□□□ 0.53
CPNE7-201ENST00000268720 SLC13A2Q13183 592 aa18.33■□□□□ 0.53
CPNE7-201ENST00000268720 TCEAL5Q5H9L2 206 aa18.33■□□□□ 0.53
CPNE7-201ENST00000268720 KDM4DQ6B0I6 523 aa18.33■□□□□ 0.53
CPNE7-201ENST00000268720 TECPR1Q7Z6L1 1165 aa18.33■□□□□ 0.53
CPNE7-201ENST00000268720 NELL1Q92832 810 aa18.33■□□□□ 0.53
CPNE7-201ENST00000268720 ZNF300Q96RE9 604 aaPredicted RBP18.33■□□□□ 0.53
CPNE7-201ENST00000268720 ZSCAN5AQ9BUG6 496 aa18.33■□□□□ 0.53
CPNE7-201ENST00000268720 TPT1P8Q9HAU6 139 aa18.33■□□□□ 0.53
CPNE7-201ENST00000268720 IL1RAPQ9NPH3 570 aa18.33■□□□□ 0.53
CPNE7-201ENST00000268720 ACOT13Q9NPJ3 140 aa18.33■□□□□ 0.53
CPNE7-201ENST00000268720 SCN3BQ9NY72 215 aa18.33■□□□□ 0.53
CPNE7-201ENST00000268720 PLAGL1Q9UM63 463 aa18.33■□□□□ 0.53
CPNE7-201ENST00000268720 LOC100506127A0A0U1RQW1 187 aa18.33■□□□□ 0.52
CPNE7-201ENST00000268720 EPN2O95208 641 aa18.33■□□□□ 0.52
CPNE7-201ENST00000268720 STATHP02808 62 aa18.33■□□□□ 0.52
CPNE7-201ENST00000268720 HSMCR30P0CW71 290 aa18.33■□□□□ 0.52
CPNE7-201ENST00000268720 XPAP23025 273 aaPredicted RBP18.33■□□□□ 0.52
CPNE7-201ENST00000268720 ACVR2AP27037 513 aa18.33■□□□□ 0.52
CPNE7-201ENST00000268720 MAPK1P28482 360 aa18.33■□□□□ 0.52
CPNE7-201ENST00000268720 TMED10P49755 219 aaKnown RBP18.33■□□□□ 0.52
CPNE7-201ENST00000268720 RPS26P62854 115 aaKnown RBP18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms