RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 PDSS2Q86YH6 399 aa9.19□□□□□ -0.94
VPS41-201ENST00000265745 KLHL7Q8IXQ5 586 aa9.19□□□□□ -0.94
VPS41-201ENST00000265745 SIRT6Q8N6T7 355 aa9.19□□□□□ -0.94
VPS41-201ENST00000265745 GPATCH11Q8N954 259 aa9.19□□□□□ -0.94
VPS41-201ENST00000265745 MFSD9Q8NBP5 474 aa9.19□□□□□ -0.94
VPS41-201ENST00000265745 OR4K1Q8NGD4 311 aa9.19□□□□□ -0.94
VPS41-201ENST00000265745 OR56A3Q8NH54 315 aa9.19□□□□□ -0.94
VPS41-201ENST00000265745 SLC13A3Q8WWT9 602 aa9.19□□□□□ -0.94
VPS41-201ENST00000265745 METTL21AQ8WXB1 218 aa9.19□□□□□ -0.94
VPS41-201ENST00000265745 ALKBH8Q96BT7 664 aaKnown RBP9.19□□□□□ -0.94
VPS41-201ENST00000265745 PYCR2Q96C36 320 aa9.19□□□□□ -0.94
VPS41-201ENST00000265745 LRRC39Q96DD0 335 aa9.19□□□□□ -0.94
VPS41-201ENST00000265745 CFAP36Q96G28 342 aa9.19□□□□□ -0.94
VPS41-201ENST00000265745 PDLIM5Q96HC4 596 aaKnown RBP9.19□□□□□ -0.94
VPS41-201ENST00000265745 CAPZA3Q96KX2 299 aa9.19□□□□□ -0.94
VPS41-201ENST00000265745 C5orf34Q96MH7 638 aa9.19□□□□□ -0.94
VPS41-201ENST00000265745 OLFM1Q99784 485 aa9.19□□□□□ -0.94
VPS41-201ENST00000265745 SLX1AQ9BQ83 275 aa9.19□□□□□ -0.94
VPS41-201ENST00000265745 HAUS8Q9BT25 410 aa9.19□□□□□ -0.94
VPS41-201ENST00000265745 TUBB6Q9BUF5 446 aa9.19□□□□□ -0.94
VPS41-201ENST00000265745 SARGQ9BW04 601 aa9.19□□□□□ -0.94
VPS41-201ENST00000265745 ARL15Q9NXU5 204 aa9.19□□□□□ -0.94
VPS41-201ENST00000265745 STMN3Q9NZ72 180 aa9.19□□□□□ -0.94
VPS41-201ENST00000265745 IKZF3Q9UKT9 509 aa9.19□□□□□ -0.94
VPS41-201ENST00000265745 CORO1CQ9ULV4 474 aaPredicted RBP9.19□□□□□ -0.94
VPS41-201ENST00000265745 CHMP2BQ9UQN3 213 aa9.19□□□□□ -0.94
VPS41-201ENST00000265745 SLC22A7Q9Y694 548 aa9.19□□□□□ -0.94
VPS41-201ENST00000265745 UNC79Q9P2D8 2635 aa9.19□□□□□ -0.94
VPS41-201ENST00000265745 IGHV3-20A0A0C4DH32 117 aa9.18□□□□□ -0.94
VPS41-201ENST00000265745 SNRNP200O75643 2136 aaKnown RBP9.18□□□□□ -0.94
VPS41-201ENST00000265745 SEC31AO94979 1220 aaKnown RBP9.18□□□□□ -0.94
VPS41-201ENST00000265745 CLDN1O95832 211 aa9.18□□□□□ -0.94
VPS41-201ENST00000265745 WDPCPO95876 746 aa9.18□□□□□ -0.94
VPS41-201ENST00000265745 ENO2P09104 434 aaPredicted RBP9.18□□□□□ -0.94
VPS41-201ENST00000265745 ITGAMP11215 1152 aa9.18□□□□□ -0.94
VPS41-201ENST00000265745 EDN3P14138 238 aa9.18□□□□□ -0.94
VPS41-201ENST00000265745 IL10P22301 178 aa9.18□□□□□ -0.94
VPS41-201ENST00000265745 CCR8P51685 355 aa9.18□□□□□ -0.94
VPS41-201ENST00000265745 ITGA8P53708 1063 aa9.18□□□□□ -0.94
VPS41-201ENST00000265745 ARL4CP56559 192 aa9.18□□□□□ -0.94
VPS41-201ENST00000265745 GNG11P61952 73 aa9.18□□□□□ -0.94
VPS41-201ENST00000265745 AP2B1P63010 937 aa9.18□□□□□ -0.94
VPS41-201ENST00000265745 PWP1Q13610 501 aa9.18□□□□□ -0.94
VPS41-201ENST00000265745 MINDY4Q4G0A6 757 aa9.18□□□□□ -0.94
VPS41-201ENST00000265745 ZNF324BQ6AW86 544 aaPredicted RBP9.18□□□□□ -0.94
VPS41-201ENST00000265745 CPEB2Q7Z5Q1 589 aaKnown RBP9.18□□□□□ -0.94
VPS41-201ENST00000265745 STRA8Q7Z7C7 330 aa9.18□□□□□ -0.94
VPS41-201ENST00000265745 AFAP1L2Q8N4X5 818 aa9.18□□□□□ -0.94
VPS41-201ENST00000265745 BCORP1Q8N888 145 aa9.18□□□□□ -0.94
VPS41-201ENST00000265745 ATL1Q8WXF7 558 aa9.18□□□□□ -0.94
VPS41-201ENST00000265745 FBXL8Q96CD0 374 aa9.18□□□□□ -0.94
VPS41-201ENST00000265745 MOCOSQ96EN8 888 aa9.18□□□□□ -0.94
VPS41-201ENST00000265745 RUNDC3BQ96NL0 473 aa9.18□□□□□ -0.94
VPS41-201ENST00000265745 TAAR6Q96RI8 345 aa9.18□□□□□ -0.94
VPS41-201ENST00000265745 TRIM54Q9BYV2 358 aa9.18□□□□□ -0.94
VPS41-201ENST00000265745 RNF32Q9H0A6 362 aa9.18□□□□□ -0.94
VPS41-201ENST00000265745 ANKHQ9HCJ1 492 aa9.18□□□□□ -0.94
VPS41-201ENST00000265745 OLAHQ9NV23 265 aa9.18□□□□□ -0.94
VPS41-201ENST00000265745 MOCS1Q9NZB8 636 aa9.18□□□□□ -0.94
VPS41-201ENST00000265745 HCN3Q9P1Z3 774 aa9.18□□□□□ -0.94
VPS41-201ENST00000265745 SAR1BQ9Y6B6 198 aa9.18□□□□□ -0.94
VPS41-201ENST00000265745 HIVEP3Q5T1R4 2406 aa9.17□□□□□ -0.94
VPS41-201ENST00000265745 ANKRD12Q6UB98 2062 aa9.17□□□□□ -0.94
VPS41-201ENST00000265745 TRBC2A0A5B9 178 aa9.17□□□□□ -0.94
VPS41-201ENST00000265745 TTI1O43156 1089 aa9.17□□□□□ -0.94
VPS41-201ENST00000265745 OR1F1O43749 312 aa9.17□□□□□ -0.94
VPS41-201ENST00000265745 GALR3O60755 368 aaPredicted RBP9.17□□□□□ -0.94
VPS41-201ENST00000265745 DNAJB6O75190 326 aa9.17□□□□□ -0.94
VPS41-201ENST00000265745 RDH16O75452 317 aa9.17□□□□□ -0.94
VPS41-201ENST00000265745 SEC24DO94855 1032 aaPredicted RBP9.17□□□□□ -0.94
VPS41-201ENST00000265745 GUCA1CO95843 209 aa9.17□□□□□ -0.94
VPS41-201ENST00000265745 F10P00742 488 aa9.17□□□□□ -0.94
VPS41-201ENST00000265745 SLC35G6P0C7Q6 338 aa9.17□□□□□ -0.94
VPS41-201ENST00000265745 MEF2AQ02078 507 aaPredicted RBP9.17□□□□□ -0.94
VPS41-201ENST00000265745 MGAT5Q09328 741 aa9.17□□□□□ -0.94
VPS41-201ENST00000265745 CBLBQ13191 982 aa9.17□□□□□ -0.94
VPS41-201ENST00000265745 CSHL1Q14406 222 aa9.17□□□□□ -0.94
VPS41-201ENST00000265745 HERC3Q15034 1050 aa9.17□□□□□ -0.94
VPS41-201ENST00000265745 CATSPEREQ5SY80 951 aa9.17□□□□□ -0.94
VPS41-201ENST00000265745 ABHD17BQ5VST6 288 aa9.17□□□□□ -0.94
VPS41-201ENST00000265745 PLAG1Q6DJT9 500 aa9.17□□□□□ -0.94
VPS41-201ENST00000265745 FAM45BPQ6NSW5 357 aa9.17□□□□□ -0.94
VPS41-201ENST00000265745 H3F3CQ6NXT2 135 aa9.17□□□□□ -0.94
VPS41-201ENST00000265745 FAM180AQ6UWF9 173 aa9.17□□□□□ -0.94
VPS41-201ENST00000265745 SBSNQ6UWP8 590 aa9.17□□□□□ -0.94
VPS41-201ENST00000265745 LANCL3Q6ZV70 420 aa9.17□□□□□ -0.94
VPS41-201ENST00000265745 MAMDC2Q7Z304 686 aaPredicted RBP9.17□□□□□ -0.94
VPS41-201ENST00000265745 ANKRD37Q7Z713 158 aa9.17□□□□□ -0.94
VPS41-201ENST00000265745 ZC3HC1Q86WB0 502 aaKnown RBP9.17□□□□□ -0.94
VPS41-201ENST00000265745 ZNF740Q8NDX6 193 aa9.17□□□□□ -0.94
VPS41-201ENST00000265745 PLPP5Q8NEB5 264 aa9.17□□□□□ -0.94
VPS41-201ENST00000265745 ZCCHC10Q8TBK6 192 aa9.17□□□□□ -0.94
VPS41-201ENST00000265745 FAM45AQ8TCE6 357 aa9.17□□□□□ -0.94
VPS41-201ENST00000265745 ANKRD7Q92527 254 aa9.17□□□□□ -0.94
VPS41-201ENST00000265745 NEIL2Q969S2 332 aa9.17□□□□□ -0.94
VPS41-201ENST00000265745 OR1F2PQ96R84 312 aa9.17□□□□□ -0.94
VPS41-201ENST00000265745 TRIM51Q9BSJ1 452 aa9.17□□□□□ -0.94
VPS41-201ENST00000265745 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.17□□□□□ -0.94
VPS41-201ENST00000265745 LANCL2Q9NS86 450 aa9.17□□□□□ -0.94
VPS41-201ENST00000265745 C19orf25Q9UFG5 118 aaPredicted RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms